RNA–Protein interactions for RNA: ENST00000438552.6

SNRPB-202, Transcript of small nuclear ribonucleoprotein polypeptides B and B1, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene SNRPB, Length 1,008 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPB-202ENST00000438552 KIAA1456Q9P272 454 aa12.8□□□□□ -0.36
SNRPB-202ENST00000438552 RRHO14718 337 aa12.79□□□□□ -0.36
SNRPB-202ENST00000438552 FCGR3BO75015 233 aa12.79□□□□□ -0.36
SNRPB-202ENST00000438552 RRASP10301 218 aa12.79□□□□□ -0.36
SNRPB-202ENST00000438552 PTBP1P26599 531 aaKnown RBP eCLIP12.79□□□□□ -0.361e-27■□□□□ 8.4
SNRPB-202ENST00000438552 PPP5CP53041 499 aa12.79□□□□□ -0.36
SNRPB-202ENST00000438552 TAGLNQ01995 201 aaKnown RBP12.79□□□□□ -0.36
SNRPB-202ENST00000438552 C5orf64Q2M2E5 130 aa12.79□□□□□ -0.36
SNRPB-202ENST00000438552 AADACL3Q5VUY0 350 aa12.79□□□□□ -0.36
SNRPB-202ENST00000438552 ZNF66Q6ZN08 573 aa12.79□□□□□ -0.36
SNRPB-202ENST00000438552 MFSD4AQ8N468 514 aa12.79□□□□□ -0.36
SNRPB-202ENST00000438552 ARRDC1Q8N5I2 433 aa12.79□□□□□ -0.36
SNRPB-202ENST00000438552 FLYWCH2Q96CP2 140 aaKnown RBP12.79□□□□□ -0.36
SNRPB-202ENST00000438552 THAP7Q9BT49 309 aaPredicted RBP12.79□□□□□ -0.36
SNRPB-202ENST00000438552 ZNF747Q9BV97 191 aa12.79□□□□□ -0.36
SNRPB-202ENST00000438552 SRRQ9GZT4 340 aa12.79□□□□□ -0.36
SNRPB-202ENST00000438552 TPSG1Q9NRR2 321 aa12.79□□□□□ -0.36
SNRPB-202ENST00000438552 PRELID3BQ9Y3B1 194 aa12.79□□□□□ -0.36
SNRPB-202ENST00000438552 LINC01548A6NM66 108 aa12.78□□□□□ -0.36
SNRPB-202ENST00000438552 SLC25A17O43808 307 aa12.78□□□□□ -0.36
SNRPB-202ENST00000438552 RLN1P04808 185 aa12.78□□□□□ -0.36
SNRPB-202ENST00000438552 ZNF735P0CB33 412 aa12.78□□□□□ -0.36
SNRPB-202ENST00000438552 AKAIN1P0CW23 69 aa12.78□□□□□ -0.36
SNRPB-202ENST00000438552 MEF2DQ14814 521 aa12.78□□□□□ -0.36
SNRPB-202ENST00000438552 PLGLAQ15195 96 aa12.78□□□□□ -0.36
SNRPB-202ENST00000438552 PSG5Q15238 335 aa12.78□□□□□ -0.36
SNRPB-202ENST00000438552 SCGB2B2Q4G0G5 96 aa12.78□□□□□ -0.36
SNRPB-202ENST00000438552 TMEM177Q53S58 311 aa12.78□□□□□ -0.36
SNRPB-202ENST00000438552 SLC35E3Q7Z769 313 aa12.78□□□□□ -0.36
SNRPB-202ENST00000438552 LHFPL1Q86WI0 220 aa12.78□□□□□ -0.36
SNRPB-202ENST00000438552 ZBTB34Q8NCN2 500 aa12.78□□□□□ -0.36
SNRPB-202ENST00000438552 OR51H1Q8NH63 302 aa12.78□□□□□ -0.36
SNRPB-202ENST00000438552 S100ZQ8WXG8 99 aa12.78□□□□□ -0.36
SNRPB-202ENST00000438552 BORCS5Q969J3 196 aa12.78□□□□□ -0.36
SNRPB-202ENST00000438552 TSNAXQ99598 290 aaKnown RBP12.78□□□□□ -0.36
SNRPB-202ENST00000438552 AKIP1Q9NQ31 210 aa12.78□□□□□ -0.36
SNRPB-202ENST00000438552 METTL1Q9UBP6 276 aaKnown RBP12.78□□□□□ -0.36
SNRPB-202ENST00000438552 GPR31O00270 319 aa12.77□□□□□ -0.37
SNRPB-202ENST00000438552 SHOXO15266 292 aa12.77□□□□□ -0.37
SNRPB-202ENST00000438552 SPDEFO95238 335 aa12.77□□□□□ -0.37
SNRPB-202ENST00000438552 IGLV2-23P01705 113 aa12.77□□□□□ -0.37
SNRPB-202ENST00000438552 IGHG2P01859 326 aa12.77□□□□□ -0.37
SNRPB-202ENST00000438552 PGAM2P15259 253 aa12.77□□□□□ -0.37
SNRPB-202ENST00000438552 BRWD1-AS2P59051 145 aa12.77□□□□□ -0.37
SNRPB-202ENST00000438552 CATR1Q13166 79 aa12.77□□□□□ -0.37
SNRPB-202ENST00000438552 PHLDA2Q53GA4 152 aa12.77□□□□□ -0.37
SNRPB-202ENST00000438552 HIST2H2BDQ6DRA6 164 aa12.77□□□□□ -0.37
SNRPB-202ENST00000438552 OR4S2Q8NH73 311 aa12.77□□□□□ -0.37
SNRPB-202ENST00000438552 NOL4LQ96MY1 436 aaPredicted RBP12.77□□□□□ -0.37
SNRPB-202ENST00000438552 RNF5Q99942 180 aa12.77□□□□□ -0.37
SNRPB-202ENST00000438552 RSRP1Q9BUV0 290 aa12.77□□□□□ -0.37
SNRPB-202ENST00000438552 WNT10AQ9GZT5 417 aa12.77□□□□□ -0.37
SNRPB-202ENST00000438552 LINC00527Q9UJ94 153 aa12.77□□□□□ -0.37
SNRPB-202ENST00000438552 DISC1C4P0D8 188 aa12.76□□□□□ -0.37
SNRPB-202ENST00000438552 HLA-DRB1P01911 266 aa12.76□□□□□ -0.37
SNRPB-202ENST00000438552 UCP3P55916 312 aa12.76□□□□□ -0.37
SNRPB-202ENST00000438552 KLF9Q13886 244 aaPredicted RBP12.76□□□□□ -0.37
SNRPB-202ENST00000438552 SLC38A6Q8IZM9 456 aa12.76□□□□□ -0.37
SNRPB-202ENST00000438552 MRGPRFQ96AM1 343 aa12.76□□□□□ -0.37
SNRPB-202ENST00000438552 CLCC1Q96S66 551 aa12.76□□□□□ -0.37
SNRPB-202ENST00000438552 IGHV7-81A0A0B4J1V7 117 aa12.75□□□□□ -0.37
SNRPB-202ENST00000438552 SRRM4A7MD48 611 aaKnown RBP12.75□□□□□ -0.37
SNRPB-202ENST00000438552 PLXNB1O43157 2135 aa12.75□□□□□ -0.37
SNRPB-202ENST00000438552 KCNAB3O43448 404 aa12.75□□□□□ -0.37
SNRPB-202ENST00000438552 RAMP3O60896 148 aa12.75□□□□□ -0.37
SNRPB-202ENST00000438552 PGLYRP1O75594 196 aaPredicted RBP12.75□□□□□ -0.37
SNRPB-202ENST00000438552 PI3P19957 117 aa12.75□□□□□ -0.37
SNRPB-202ENST00000438552 KIR2DS2P43631 304 aa12.75□□□□□ -0.37
SNRPB-202ENST00000438552 NDPQ00604 133 aa12.75□□□□□ -0.37
SNRPB-202ENST00000438552 ZNF45Q02386 682 aa12.75□□□□□ -0.37
SNRPB-202ENST00000438552 LIN54Q6MZP7 749 aa12.75□□□□□ -0.37
SNRPB-202ENST00000438552 LPCAT3Q6P1A2 487 aa12.75□□□□□ -0.37
SNRPB-202ENST00000438552 SHISA2Q6UWI4 295 aa12.75□□□□□ -0.37
SNRPB-202ENST00000438552 C10orf99Q6UWK7 81 aa12.75□□□□□ -0.37
SNRPB-202ENST00000438552 CMTM1Q8IZ96 169 aa12.75□□□□□ -0.37
SNRPB-202ENST00000438552 SPAG16Q8N0X2 631 aa12.75□□□□□ -0.37
SNRPB-202ENST00000438552 TOMM5Q8N4H5 51 aa12.75□□□□□ -0.37
SNRPB-202ENST00000438552 C11orf44Q8N8P7 122 aa12.75□□□□□ -0.37
SNRPB-202ENST00000438552 OR51S1Q8NGJ8 323 aa12.75□□□□□ -0.37
SNRPB-202ENST00000438552 OSR1Q8TAX0 266 aaPredicted RBP12.75□□□□□ -0.37
SNRPB-202ENST00000438552 MARCH1Q8TCQ1 289 aa12.75□□□□□ -0.37
SNRPB-202ENST00000438552 WIPF2Q8TF74 440 aaPredicted RBP12.75□□□□□ -0.37
SNRPB-202ENST00000438552 SDHCQ99643 169 aaPredicted RBP12.75□□□□□ -0.37
SNRPB-202ENST00000438552 CITED1Q99966 193 aa12.75□□□□□ -0.37
SNRPB-202ENST00000438552 WDR12Q9GZL7 423 aaKnown RBP12.75□□□□□ -0.37
SNRPB-202ENST00000438552 TET2Q6N021 2002 aaPredicted RBP12.74□□□□□ -0.37
SNRPB-202ENST00000438552 FCN1O00602 326 aa12.74□□□□□ -0.37
SNRPB-202ENST00000438552 ATP6V0E1O15342 81 aa12.74□□□□□ -0.37
SNRPB-202ENST00000438552 CA2P00918 260 aa12.74□□□□□ -0.37
SNRPB-202ENST00000438552 SAA1P0DJI8 122 aaPredicted RBP12.74□□□□□ -0.37
SNRPB-202ENST00000438552 LGALS7P47929 136 aa12.74□□□□□ -0.37
SNRPB-202ENST00000438552 ZNF846Q147U1 533 aa12.74□□□□□ -0.37
SNRPB-202ENST00000438552 BAK1Q16611 211 aa12.74□□□□□ -0.37
SNRPB-202ENST00000438552 IDO2Q6ZQW0 420 aa12.74□□□□□ -0.37
SNRPB-202ENST00000438552 FOXRED2Q8IWF2 684 aa12.74□□□□□ -0.37
SNRPB-202ENST00000438552 VKORC1L1Q8N0U8 176 aa12.74□□□□□ -0.37
SNRPB-202ENST00000438552 GDPD1Q8N9F7 314 aa12.74□□□□□ -0.37
SNRPB-202ENST00000438552 OR13C8Q8NGS7 320 aa12.74□□□□□ -0.37
SNRPB-202ENST00000438552 TERB2Q8NHR7 220 aa12.74□□□□□ -0.37
SNRPB-202ENST00000438552 PARP11Q9NR21 331 aa12.74□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 37.7 ms