RNA–Protein interactions for RNA: ENST00000436427.1

YBX1-203, Transcript of Y-box binding protein 1, humanhuman

TSL 1 (best)

Gene YBX1, Length 1,524 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YBX1-203ENST00000436427 PIP4P2Q8N4L2 257 aa17.28■□□□□ 0.36
YBX1-203ENST00000436427 C18orf12Q96KH6 178 aa17.28■□□□□ 0.36
YBX1-203ENST00000436427 NABP2Q9BQ15 211 aa17.28■□□□□ 0.36
YBX1-203ENST00000436427 PDCD10Q9BUL8 212 aa17.28■□□□□ 0.36
YBX1-203ENST00000436427 TMEM222Q9H0R3 208 aa17.28■□□□□ 0.36
YBX1-203ENST00000436427 SHPKQ9UHJ6 478 aa17.28■□□□□ 0.36
YBX1-203ENST00000436427 RAMP3O60896 148 aa17.27■□□□□ 0.36
YBX1-203ENST00000436427 SIX6O95475 246 aa17.27■□□□□ 0.36
YBX1-203ENST00000436427 HLA-GP17693 338 aa17.27■□□□□ 0.36
YBX1-203ENST00000436427 H2BFSP57053 126 aa17.27■□□□□ 0.36
YBX1-203ENST00000436427 SSX2Q16385 188 aa17.27■□□□□ 0.36
YBX1-203ENST00000436427 KLF17Q5JT82 389 aaPredicted RBP17.27■□□□□ 0.36
YBX1-203ENST00000436427 MOB3BQ86TA1 216 aa17.27■□□□□ 0.36
YBX1-203ENST00000436427 OR11H4Q8NGC9 324 aa17.27■□□□□ 0.36
YBX1-203ENST00000436427 C17orf50Q8WW18 174 aa17.27■□□□□ 0.36
YBX1-203ENST00000436427 IGHV1-3A0A0C4DH29 117 aa17.26■□□□□ 0.35
YBX1-203ENST00000436427 CD5LO43866 347 aa17.26■□□□□ 0.35
YBX1-203ENST00000436427 UCP1P25874 307 aa17.26■□□□□ 0.35
YBX1-203ENST00000436427 PAX6P26367 422 aa17.26■□□□□ 0.35
YBX1-203ENST00000436427 LIAT1Q6ZQX7 453 aa17.26■□□□□ 0.35
YBX1-203ENST00000436427 DDB2Q92466 427 aa17.26■□□□□ 0.35
YBX1-203ENST00000436427 COMMD9Q9P000 198 aa17.26■□□□□ 0.35
YBX1-203ENST00000436427 H7C2Y5 167 aa17.26■□□□□ 0.35
YBX1-203ENST00000436427 APOA2P02652 100 aa17.26■□□□□ 0.35
YBX1-203ENST00000436427 KIR2DS2P43631 304 aa17.26■□□□□ 0.35
YBX1-203ENST00000436427 BRWD1-AS2P59051 145 aa17.26■□□□□ 0.35
YBX1-203ENST00000436427 SRPXP78539 464 aa17.26■□□□□ 0.35
YBX1-203ENST00000436427 KRTAP1-1Q07627 177 aa17.26■□□□□ 0.35
YBX1-203ENST00000436427 SRSF4Q08170 494 aaKnown RBP17.26■□□□□ 0.35
YBX1-203ENST00000436427 C2orf68Q2NKX9 166 aa17.26■□□□□ 0.35
YBX1-203ENST00000436427 ZNF695Q8IW36 515 aa17.26■□□□□ 0.35
YBX1-203ENST00000436427 LGI3Q8N145 548 aa17.26■□□□□ 0.35
YBX1-203ENST00000436427 TCTEX1D1Q8N7M0 179 aa17.26■□□□□ 0.35
YBX1-203ENST00000436427 CD300LFQ8TDQ1 290 aa17.26■□□□□ 0.35
YBX1-203ENST00000436427 MALSU1Q96EH3 234 aa17.26■□□□□ 0.35
YBX1-203ENST00000436427 SLC35D1Q9NTN3 355 aa17.26■□□□□ 0.35
YBX1-203ENST00000436427 OTOGQ6ZRI0 2925 aa17.26■□□□□ 0.35
YBX1-203ENST00000436427 IGHV3-72A0A0B4J1Y9 119 aa17.25■□□□□ 0.35
YBX1-203ENST00000436427 H0YJW9 148 aa17.25■□□□□ 0.35
YBX1-203ENST00000436427 ATP6V1G1O75348 118 aa17.25■□□□□ 0.35
YBX1-203ENST00000436427 LPAR6P43657 344 aa17.25■□□□□ 0.35
YBX1-203ENST00000436427 RTL8BQ17RB0 113 aa17.25■□□□□ 0.35
YBX1-203ENST00000436427 ZNF585BQ52M93 769 aa17.25■□□□□ 0.35
YBX1-203ENST00000436427 TMEM268Q5VZI3 342 aa17.25■□□□□ 0.35
YBX1-203ENST00000436427 CCDC144NLQ6NUI1 221 aa17.25■□□□□ 0.35
YBX1-203ENST00000436427 ZNF767PQ75MW2 155 aa17.25■□□□□ 0.35
YBX1-203ENST00000436427 DYNAPQ8N1N2 210 aa17.25■□□□□ 0.35
YBX1-203ENST00000436427 LHFPL5Q8TAF8 219 aa17.25■□□□□ 0.35
YBX1-203ENST00000436427 RBMXL1Q96E39 390 aaKnown RBP17.25■□□□□ 0.35
YBX1-203ENST00000436427 A0A1W2PPI3 338 aa17.24■□□□□ 0.35
YBX1-203ENST00000436427 HMSDA8MTL9 139 aa17.24■□□□□ 0.35
YBX1-203ENST00000436427 OOSP1A8MZH6 123 aa17.24■□□□□ 0.35
YBX1-203ENST00000436427 G3V3Q6 166 aa17.24■□□□□ 0.35
YBX1-203ENST00000436427 GSG1LQ6UXU4 331 aa17.24■□□□□ 0.35
YBX1-203ENST00000436427 OR8H3Q8N146 312 aa17.24■□□□□ 0.35
YBX1-203ENST00000436427 OR5AN1Q8NGI8 311 aa17.24■□□□□ 0.35
YBX1-203ENST00000436427 OR4S2Q8NH73 311 aa17.24■□□□□ 0.35
YBX1-203ENST00000436427 NANPQ8TBE9 248 aa17.24■□□□□ 0.35
YBX1-203ENST00000436427 TMEM56Q96MV1 263 aa17.24■□□□□ 0.35
YBX1-203ENST00000436427 TMEM56-RWDD3S4R434 201 aa17.24■□□□□ 0.35
YBX1-203ENST00000436427 ABCA1O95477 2261 aa17.24■□□□□ 0.35
YBX1-203ENST00000436427 CELSR1Q9NYQ6 3014 aa17.23■□□□□ 0.35
YBX1-203ENST00000436427 L7N2F9 121 aa17.23■□□□□ 0.35
YBX1-203ENST00000436427 TIMM23O14925 209 aa17.23■□□□□ 0.35
YBX1-203ENST00000436427 TSC22D2O75157 780 aa17.23■□□□□ 0.35
YBX1-203ENST00000436427 S1PR2O95136 353 aa17.23■□□□□ 0.35
YBX1-203ENST00000436427 CDS2O95674 445 aa17.23■□□□□ 0.35
YBX1-203ENST00000436427 CRYZL1O95825 349 aa17.23■□□□□ 0.35
YBX1-203ENST00000436427 CYCSP99999 105 aaKnown RBP17.23■□□□□ 0.35
YBX1-203ENST00000436427 TAGLNQ01995 201 aaKnown RBP17.23■□□□□ 0.35
YBX1-203ENST00000436427 Q5BKY6 102 aa17.23■□□□□ 0.35
YBX1-203ENST00000436427 SPNS3Q6ZMD2 512 aa17.23■□□□□ 0.35
YBX1-203ENST00000436427 RBPMSQ93062 196 aaKnown RBP17.23■□□□□ 0.35
YBX1-203ENST00000436427 AJUBAQ96IF1 538 aa17.23■□□□□ 0.35
YBX1-203ENST00000436427 RAB18Q9NP72 206 aa17.23■□□□□ 0.35
YBX1-203ENST00000436427 YAE1D1Q9NRH1 226 aa17.23■□□□□ 0.35
YBX1-203ENST00000436427 FAM212BQ9NTI7 297 aaPredicted RBP17.23■□□□□ 0.35
YBX1-203ENST00000436427 RBFOX2O43251 390 aaKnown RBP eCLIP17.22■□□□□ 0.353e-6■□□□□ 8.1
YBX1-203ENST00000436427 RRASP10301 218 aa17.22■□□□□ 0.35
YBX1-203ENST00000436427 RPA2P15927 270 aa17.22■□□□□ 0.35
YBX1-203ENST00000436427 MC5RP33032 325 aa17.22■□□□□ 0.35
YBX1-203ENST00000436427 SELENOHQ8IZQ5 122 aaKnown RBP17.22■□□□□ 0.35
YBX1-203ENST00000436427 SLC35G3Q8N808 338 aa17.22■□□□□ 0.35
YBX1-203ENST00000436427 NUP50Q9UKX7 468 aa17.22■□□□□ 0.35
YBX1-203ENST00000436427 WASHC3Q9Y3C0 194 aa17.22■□□□□ 0.35
YBX1-203ENST00000436427 FAM96BQ9Y3D0 163 aa17.22■□□□□ 0.35
YBX1-203ENST00000436427 FXYD6-FXYD2A0A087WZ82 144 aa17.21■□□□□ 0.35
YBX1-203ENST00000436427 A0A0U1RQK1 487 aa17.21■□□□□ 0.35
YBX1-203ENST00000436427 FAM25EA8MYX2 175 aa17.21■□□□□ 0.35
YBX1-203ENST00000436427 HPRT1P00492 218 aa17.21■□□□□ 0.35
YBX1-203ENST00000436427 IGKV1-39P01597 117 aa17.21■□□□□ 0.35
YBX1-203ENST00000436427 IGKV1-16P04430 117 aa17.21■□□□□ 0.35
YBX1-203ENST00000436427 IGKV1D-39P04432 117 aa17.21■□□□□ 0.35
YBX1-203ENST00000436427 HOXB5P09067 269 aa17.21■□□□□ 0.35
YBX1-203ENST00000436427 RAB13P51153 203 aa17.21■□□□□ 0.35
YBX1-203ENST00000436427 ARHGDIBP52566 201 aa17.21■□□□□ 0.35
YBX1-203ENST00000436427 LGALSLQ3ZCW2 172 aaPredicted RBP17.21■□□□□ 0.35
YBX1-203ENST00000436427 LYZL2Q7Z4W2 148 aa17.21■□□□□ 0.35
YBX1-203ENST00000436427 PDPNQ86YL7 162 aa17.21■□□□□ 0.35
YBX1-203ENST00000436427 LRTM2Q8N967 370 aa17.21■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 43 ms