RNA–Protein interactions for RNA: ENST00000430158.5

USP40-205, Transcript of ubiquitin specific peptidase 40, humanhuman

TSL 3

Gene USP40, Length 1,047 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP40-205ENST00000430158 RSRP1Q9BUV0 290 aa9.85□□□□□ -0.83
USP40-205ENST00000430158 SERTAD4Q9NUC0 356 aa9.85□□□□□ -0.83
USP40-205ENST00000430158 TAS2R8Q9NYW2 309 aa9.85□□□□□ -0.83
USP40-205ENST00000430158 CLPSL1A2RUU4 121 aa9.84□□□□□ -0.83
USP40-205ENST00000430158 M0QZK8 103 aa9.84□□□□□ -0.83
USP40-205ENST00000430158 PGLYRP1O75594 196 aaPredicted RBP9.84□□□□□ -0.83
USP40-205ENST00000430158 CRYGBP07316 175 aa9.84□□□□□ -0.83
USP40-205ENST00000430158 AKAIN1P0CW23 69 aa9.84□□□□□ -0.83
USP40-205ENST00000430158 VSIG10L2P0DP72 767 aa9.84□□□□□ -0.83
USP40-205ENST00000430158 KRTAP10-3P60369 221 aa9.84□□□□□ -0.83
USP40-205ENST00000430158 HERV-K104P61576 105 aa9.84□□□□□ -0.83
USP40-205ENST00000430158 TSPAN5P62079 268 aa9.84□□□□□ -0.83
USP40-205ENST00000430158 TAGLNQ01995 201 aaKnown RBP9.84□□□□□ -0.83
USP40-205ENST00000430158 FOXL1Q12952 345 aa9.84□□□□□ -0.83
USP40-205ENST00000430158 MEF2DQ14814 521 aa9.84□□□□□ -0.83
USP40-205ENST00000430158 MRGPRG-AS1Q2M3A8 158 aa9.84□□□□□ -0.83
USP40-205ENST00000430158 ZNF66Q6ZN08 573 aa9.84□□□□□ -0.83
USP40-205ENST00000430158 TMEM17Q86X19 198 aa9.84□□□□□ -0.83
USP40-205ENST00000430158 OR13C8Q8NGS7 320 aa9.84□□□□□ -0.83
USP40-205ENST00000430158 OR4F5Q8NH21 305 aa9.84□□□□□ -0.83
USP40-205ENST00000430158 TERB2Q8NHR7 220 aa9.84□□□□□ -0.83
USP40-205ENST00000430158 WNT10AQ9GZT5 417 aa9.84□□□□□ -0.83
USP40-205ENST00000430158 SLC35D1Q9NTN3 355 aa9.84□□□□□ -0.83
USP40-205ENST00000430158 SLC2A8Q9NY64 477 aa9.84□□□□□ -0.83
USP40-205ENST00000430158 TRRAPQ9Y4A5 3859 aa9.83□□□□□ -0.84
USP40-205ENST00000430158 LINC01548A6NM66 108 aa9.83□□□□□ -0.84
USP40-205ENST00000430158 PSG5Q15238 335 aa9.83□□□□□ -0.84
USP40-205ENST00000430158 C5orf64Q2M2E5 130 aa9.83□□□□□ -0.84
USP40-205ENST00000430158 ABCA11PQ4W5N1 156 aa9.83□□□□□ -0.84
USP40-205ENST00000430158 C4orf48Q5BLP8 95 aa9.83□□□□□ -0.84
USP40-205ENST00000430158 OR4C13Q8NGP0 309 aa9.83□□□□□ -0.84
USP40-205ENST00000430158 PRSS22Q9GZN4 317 aa9.83□□□□□ -0.84
USP40-205ENST00000430158 HRASLSQ9HDD0 168 aa9.83□□□□□ -0.84
USP40-205ENST00000430158 LIN7CQ9NUP9 197 aaKnown RBP9.83□□□□□ -0.84
USP40-205ENST00000430158 VWFP04275 2813 aa9.83□□□□□ -0.84
USP40-205ENST00000430158 A0A1B0GUS0 222 aa9.82□□□□□ -0.84
USP40-205ENST00000430158 H7C2Y5 167 aa9.82□□□□□ -0.84
USP40-205ENST00000430158 GPR31O00270 319 aa9.82□□□□□ -0.84
USP40-205ENST00000430158 FCN1O00602 326 aa9.82□□□□□ -0.84
USP40-205ENST00000430158 RRHO14718 337 aa9.82□□□□□ -0.84
USP40-205ENST00000430158 NBR2O15453 112 aa9.82□□□□□ -0.84
USP40-205ENST00000430158 TNFSF12O43508 249 aa9.82□□□□□ -0.84
USP40-205ENST00000430158 IGHG2P01859 326 aa9.82□□□□□ -0.84
USP40-205ENST00000430158 APOA2P02652 100 aa9.82□□□□□ -0.84
USP40-205ENST00000430158 IFNA6P05013 189 aa9.82□□□□□ -0.84
USP40-205ENST00000430158 RRASP10301 218 aa9.82□□□□□ -0.84
USP40-205ENST00000430158 RND3P61587 244 aa9.82□□□□□ -0.84
USP40-205ENST00000430158 TMEM95Q3KNT9 176 aa9.82□□□□□ -0.84
USP40-205ENST00000430158 KCTD9Q7L273 389 aa9.82□□□□□ -0.84
USP40-205ENST00000430158 OR51S1Q8NGJ8 323 aa9.82□□□□□ -0.84
USP40-205ENST00000430158 DEDD2Q8WXF8 326 aa9.82□□□□□ -0.84
USP40-205ENST00000430158 FLYWCH2Q96CP2 140 aaKnown RBP9.82□□□□□ -0.84
USP40-205ENST00000430158 BEX1Q9HBH7 125 aa9.82□□□□□ -0.84
USP40-205ENST00000430158 NCBP2LA6PVI3 153 aaKnown RBP9.81□□□□□ -0.84
USP40-205ENST00000430158 RBFOX2O43251 390 aaKnown RBP eCLIP9.81□□□□□ -0.84
USP40-205ENST00000430158 RAMP3O60896 148 aa9.81□□□□□ -0.84
USP40-205ENST00000430158 FCGR3BO75015 233 aa9.81□□□□□ -0.84
USP40-205ENST00000430158 SPDEFO95238 335 aa9.81□□□□□ -0.84
USP40-205ENST00000430158 HLA-DRB1P01911 266 aa9.81□□□□□ -0.84
USP40-205ENST00000430158 IL7P13232 177 aa9.81□□□□□ -0.84
USP40-205ENST00000430158 LGALS7P47929 136 aa9.81□□□□□ -0.84
USP40-205ENST00000430158 RPS16P62249 146 aaKnown RBP9.81□□□□□ -0.84
USP40-205ENST00000430158 SSBP2P81877 361 aaPredicted RBP9.81□□□□□ -0.84
USP40-205ENST00000430158 MMDQ15546 238 aa9.81□□□□□ -0.84
USP40-205ENST00000430158 ZNF585BQ52M93 769 aa9.81□□□□□ -0.84
USP40-205ENST00000430158 LPCAT3Q6P1A2 487 aa9.81□□□□□ -0.84
USP40-205ENST00000430158 SLC38A6Q8IZM9 456 aa9.81□□□□□ -0.84
USP40-205ENST00000430158 TOMM5Q8N4H5 51 aa9.81□□□□□ -0.84
USP40-205ENST00000430158 SPATA3Q8NHX4 192 aa9.81□□□□□ -0.84
USP40-205ENST00000430158 HSPB9Q9BQS6 159 aa9.81□□□□□ -0.84
USP40-205ENST00000430158 RTBDNQ9BSG5 229 aaPredicted RBP9.81□□□□□ -0.84
USP40-205ENST00000430158 GPR132Q9UNW8 380 aa9.81□□□□□ -0.84
USP40-205ENST00000430158 RNF114Q9Y508 228 aa9.81□□□□□ -0.84
USP40-205ENST00000430158 TET2Q6N021 2002 aaPredicted RBP9.81□□□□□ -0.84
USP40-205ENST00000430158 IGHV7-81A0A0B4J1V7 117 aa9.8□□□□□ -0.84
USP40-205ENST00000430158 DISC1C4P0D8 188 aa9.8□□□□□ -0.84
USP40-205ENST00000430158 CRYZL1O95825 349 aa9.8□□□□□ -0.84
USP40-205ENST00000430158 IL6RP08887 468 aaPredicted RBP9.8□□□□□ -0.84
USP40-205ENST00000430158 EGR2P11161 476 aaPredicted RBP9.8□□□□□ -0.84
USP40-205ENST00000430158 PI3P19957 117 aa9.8□□□□□ -0.84
USP40-205ENST00000430158 SURF2Q15527 256 aaPredicted RBP9.8□□□□□ -0.84
USP40-205ENST00000430158 RTL8BQ17RB0 113 aa9.8□□□□□ -0.84
USP40-205ENST00000430158 PHLDA2Q53GA4 152 aa9.8□□□□□ -0.84
USP40-205ENST00000430158 OR2B11Q5JQS5 317 aa9.8□□□□□ -0.84
USP40-205ENST00000430158 OR2T6Q8NHC8 308 aa9.8□□□□□ -0.84
USP40-205ENST00000430158 OSR1Q8TAX0 266 aaPredicted RBP9.8□□□□□ -0.84
USP40-205ENST00000430158 MARCH1Q8TCQ1 289 aa9.8□□□□□ -0.84
USP40-205ENST00000430158 TCTEX1D2Q8WW35 142 aa9.8□□□□□ -0.84
USP40-205ENST00000430158 WFDC12Q8WWY7 111 aa9.8□□□□□ -0.84
USP40-205ENST00000430158 BORCS5Q969J3 196 aa9.8□□□□□ -0.84
USP40-205ENST00000430158 ZNF486Q96H40 463 aaPredicted RBP9.8□□□□□ -0.84
USP40-205ENST00000430158 TSNAXQ99598 290 aaKnown RBP9.8□□□□□ -0.84
USP40-205ENST00000430158 PRRT1Q99946 306 aa9.8□□□□□ -0.84
USP40-205ENST00000430158 ZNF747Q9BV97 191 aa9.8□□□□□ -0.84
USP40-205ENST00000430158 FBXL15Q9H469 300 aa9.8□□□□□ -0.84
USP40-205ENST00000430158 C5orf66Q9H5L9 145 aa9.8□□□□□ -0.84
USP40-205ENST00000430158 SLC2A9Q9NRM0 540 aa9.8□□□□□ -0.84
USP40-205ENST00000430158 TPSG1Q9NRR2 321 aa9.8□□□□□ -0.84
USP40-205ENST00000430158 ZNF580Q9UK33 172 aa9.8□□□□□ -0.84
USP40-205ENST00000430158 PRELID3BQ9Y3B1 194 aa9.8□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 39.2 ms