RNA–Protein interactions for RNA: ENST00000428843.5

PTPN18-205, Transcript of protein tyrosine phosphatase, non-receptor type 18, humanhuman

TSL 3

Gene PTPN18, Length 785 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN18-205ENST00000428843 SERTAD4Q9NUC0 356 aa17.71■□□□□ 0.43
PTPN18-205ENST00000428843 KIAA1456Q9P272 454 aa17.71■□□□□ 0.43
PTPN18-205ENST00000428843 DISC1C4P0D8 188 aa17.7■□□□□ 0.42
PTPN18-205ENST00000428843 GPR31O00270 319 aa17.7■□□□□ 0.42
PTPN18-205ENST00000428843 FCGR3BO75015 233 aa17.7■□□□□ 0.42
PTPN18-205ENST00000428843 PROK1P58294 105 aa17.7■□□□□ 0.42
PTPN18-205ENST00000428843 ZNF45Q02386 682 aa17.7■□□□□ 0.42
PTPN18-205ENST00000428843 KLF9Q13886 244 aaPredicted RBP17.7■□□□□ 0.42
PTPN18-205ENST00000428843 TMEM95Q3KNT9 176 aa17.7■□□□□ 0.42
PTPN18-205ENST00000428843 TMEM177Q53S58 311 aa17.7■□□□□ 0.42
PTPN18-205ENST00000428843 SDHCQ99643 169 aaPredicted RBP17.7■□□□□ 0.42
PTPN18-205ENST00000428843 RSRP1Q9BUV0 290 aa17.7■□□□□ 0.42
PTPN18-205ENST00000428843 RRHO14718 337 aa17.69■□□□□ 0.42
PTPN18-205ENST00000428843 CRYZL1O95825 349 aa17.69■□□□□ 0.42
PTPN18-205ENST00000428843 VDAC2P45880 294 aaPredicted RBP17.69■□□□□ 0.42
PTPN18-205ENST00000428843 C5orf64Q2M2E5 130 aa17.69■□□□□ 0.42
PTPN18-205ENST00000428843 LINC00299Q6ZSB3 139 aa17.69■□□□□ 0.42
PTPN18-205ENST00000428843 SLC38A6Q8IZM9 456 aa17.69■□□□□ 0.42
PTPN18-205ENST00000428843 TOMM5Q8N4H5 51 aa17.69■□□□□ 0.42
PTPN18-205ENST00000428843 TERB2Q8NHR7 220 aa17.69■□□□□ 0.42
PTPN18-205ENST00000428843 HARBI1Q96MB7 349 aa17.69■□□□□ 0.42
PTPN18-205ENST00000428843 TSNAXQ99598 290 aaKnown RBP17.69■□□□□ 0.42
PTPN18-205ENST00000428843 FBXL15Q9H469 300 aa17.69■□□□□ 0.42
PTPN18-205ENST00000428843 AKIP1Q9NQ31 210 aa17.69■□□□□ 0.42
PTPN18-205ENST00000428843 HAX1O00165 279 aa17.68■□□□□ 0.42
PTPN18-205ENST00000428843 SHOXO15266 292 aa17.68■□□□□ 0.42
PTPN18-205ENST00000428843 PGLYRP1O75594 196 aaPredicted RBP17.68■□□□□ 0.42
PTPN18-205ENST00000428843 PGAM2P15259 253 aa17.68■□□□□ 0.42
PTPN18-205ENST00000428843 PPP5CP53041 499 aa17.68■□□□□ 0.42
PTPN18-205ENST00000428843 BRWD1-AS2P59051 145 aa17.68■□□□□ 0.42
PTPN18-205ENST00000428843 AP3S2P59780 193 aa17.68■□□□□ 0.42
PTPN18-205ENST00000428843 CATR1Q13166 79 aa17.68■□□□□ 0.42
PTPN18-205ENST00000428843 PSG5Q15238 335 aa17.68■□□□□ 0.42
PTPN18-205ENST00000428843 BAK1Q16611 211 aa17.68■□□□□ 0.42
PTPN18-205ENST00000428843 PHLDA2Q53GA4 152 aa17.68■□□□□ 0.42
PTPN18-205ENST00000428843 CMTM1Q8IZ96 169 aa17.68■□□□□ 0.42
PTPN18-205ENST00000428843 OR51H1Q8NH63 302 aa17.68■□□□□ 0.42
PTPN18-205ENST00000428843 SRRM4A7MD48 611 aaKnown RBP17.67■□□□□ 0.42
PTPN18-205ENST00000428843 SPDEFO95238 335 aa17.67■□□□□ 0.42
PTPN18-205ENST00000428843 IGLV2-23P01705 113 aa17.67■□□□□ 0.42
PTPN18-205ENST00000428843 IGHG2P01859 326 aa17.67■□□□□ 0.42
PTPN18-205ENST00000428843 KIR2DS2P43631 304 aa17.67■□□□□ 0.42
PTPN18-205ENST00000428843 LGALS7P47929 136 aa17.67■□□□□ 0.42
PTPN18-205ENST00000428843 C3orf56Q8N813 242 aa17.67■□□□□ 0.42
PTPN18-205ENST00000428843 OR51S1Q8NGJ8 323 aa17.67■□□□□ 0.42
PTPN18-205ENST00000428843 OR4S2Q8NH73 311 aa17.67■□□□□ 0.42
PTPN18-205ENST00000428843 SPATA3Q8NHX4 192 aa17.67■□□□□ 0.42
PTPN18-205ENST00000428843 MRGPRFQ96AM1 343 aa17.67■□□□□ 0.42
PTPN18-205ENST00000428843 HSPB9Q9BQS6 159 aa17.67■□□□□ 0.42
PTPN18-205ENST00000428843 HRASLSQ9HDD0 168 aa17.67■□□□□ 0.42
PTPN18-205ENST00000428843 METTL1Q9UBP6 276 aaKnown RBP17.67■□□□□ 0.42
PTPN18-205ENST00000428843 RLN1P04808 185 aa17.66■□□□□ 0.42
PTPN18-205ENST00000428843 PLGLAQ15195 96 aa17.66■□□□□ 0.42
PTPN18-205ENST00000428843 LIN54Q6MZP7 749 aa17.66■□□□□ 0.42
PTPN18-205ENST00000428843 SLC35E3Q7Z769 313 aa17.66■□□□□ 0.42
PTPN18-205ENST00000428843 KLHDC1Q8N7A1 406 aa17.66■□□□□ 0.42
PTPN18-205ENST00000428843 OSR1Q8TAX0 266 aaPredicted RBP17.66■□□□□ 0.42
PTPN18-205ENST00000428843 WFDC12Q8WWY7 111 aa17.66■□□□□ 0.42
PTPN18-205ENST00000428843 PRRT1Q99946 306 aa17.66■□□□□ 0.42
PTPN18-205ENST00000428843 MCUBQ9NWR8 336 aa17.66■□□□□ 0.42
PTPN18-205ENST00000428843 SLC2A8Q9NY64 477 aa17.66■□□□□ 0.42
PTPN18-205ENST00000428843 LINC01548A6NM66 108 aa17.65■□□□□ 0.42
PTPN18-205ENST00000428843 SLC25A17O43808 307 aa17.65■□□□□ 0.42
PTPN18-205ENST00000428843 VSIG10L2P0DP72 767 aa17.65■□□□□ 0.42
PTPN18-205ENST00000428843 S100GP29377 79 aa17.65■□□□□ 0.42
PTPN18-205ENST00000428843 FAUP35544 74 aaKnown RBP17.65■□□□□ 0.42
PTPN18-205ENST00000428843 TRIQKQ629K1 86 aa17.65■□□□□ 0.42
PTPN18-205ENST00000428843 ZNF57Q68EA5 555 aaPredicted RBP17.65■□□□□ 0.42
PTPN18-205ENST00000428843 SPAG16Q8N0X2 631 aa17.65■□□□□ 0.42
PTPN18-205ENST00000428843 MARCH1Q8TCQ1 289 aa17.65■□□□□ 0.42
PTPN18-205ENST00000428843 ZNF747Q9BV97 191 aa17.65■□□□□ 0.42
PTPN18-205ENST00000428843 WNT10AQ9GZT5 417 aa17.65■□□□□ 0.42
PTPN18-205ENST00000428843 RAMP3O60896 148 aa17.64■□□□□ 0.41
PTPN18-205ENST00000428843 HLA-DRB1P01911 266 aa17.64■□□□□ 0.41
PTPN18-205ENST00000428843 PI3P19957 117 aa17.64■□□□□ 0.41
PTPN18-205ENST00000428843 INPP1P49441 399 aa17.64■□□□□ 0.41
PTPN18-205ENST00000428843 KRTAP10-3P60369 221 aa17.64■□□□□ 0.41
PTPN18-205ENST00000428843 OR13C8Q8NGS7 320 aa17.64■□□□□ 0.41
PTPN18-205ENST00000428843 ZFAND1Q8TCF1 268 aa17.64■□□□□ 0.41
PTPN18-205ENST00000428843 ZNF486Q96H40 463 aaPredicted RBP17.64■□□□□ 0.41
PTPN18-205ENST00000428843 SLC2A9Q9NRM0 540 aa17.64■□□□□ 0.41
PTPN18-205ENST00000428843 TPSG1Q9NRR2 321 aa17.64■□□□□ 0.41
PTPN18-205ENST00000428843 SCP2D1Q9UJQ7 156 aa17.64■□□□□ 0.41
PTPN18-205ENST00000428843 FCN1O00602 326 aa17.63■□□□□ 0.41
PTPN18-205ENST00000428843 KCNAB3O43448 404 aa17.63■□□□□ 0.41
PTPN18-205ENST00000428843 CRYGBP07316 175 aa17.63■□□□□ 0.41
PTPN18-205ENST00000428843 ECI1P42126 302 aa17.63■□□□□ 0.41
PTPN18-205ENST00000428843 RND3P61587 244 aa17.63■□□□□ 0.41
PTPN18-205ENST00000428843 IDO2Q6ZQW0 420 aa17.63■□□□□ 0.41
PTPN18-205ENST00000428843 TBC1D26Q86UD7 250 aa17.63■□□□□ 0.41
PTPN18-205ENST00000428843 POC5Q8NA72 575 aa17.63■□□□□ 0.41
PTPN18-205ENST00000428843 DEDD2Q8WXF8 326 aa17.63■□□□□ 0.41
PTPN18-205ENST00000428843 S100ZQ8WXG8 99 aa17.63■□□□□ 0.41
PTPN18-205ENST00000428843 CLCC1Q96S66 551 aa17.63■□□□□ 0.41
PTPN18-205ENST00000428843 IGHV7-81A0A0B4J1V7 117 aa17.62■□□□□ 0.41
PTPN18-205ENST00000428843 RBFOX2O43251 390 aaKnown RBP eCLIP17.62■□□□□ 0.412e-6■■■□□ 16.6
PTPN18-205ENST00000428843 IL7P13232 177 aa17.62■□□□□ 0.41
PTPN18-205ENST00000428843 UBE2KP61086 200 aa17.62■□□□□ 0.41
PTPN18-205ENST00000428843 SRSF4Q08170 494 aaKnown RBP17.62■□□□□ 0.41
PTPN18-205ENST00000428843 VMA21Q3ZAQ7 101 aa17.62■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 36.8 ms