RNA–Protein interactions for RNA: ENST00000427506.5

GPC1-205, Transcript of glypican 1, humanhuman

TSL 3

Gene GPC1, Length 573 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPC1-205ENST00000427506 SCAND1P57086 179 aa14.29□□□□□ -0.12
GPC1-205ENST00000427506 PJVKQ0ZLH3 352 aa14.29□□□□□ -0.12
GPC1-205ENST00000427506 TIMM50Q3ZCQ8 353 aa14.29□□□□□ -0.12
GPC1-205ENST00000427506 TMEM177Q53S58 311 aa14.29□□□□□ -0.12
GPC1-205ENST00000427506 CNIH2Q6PI25 160 aa14.29□□□□□ -0.12
GPC1-205ENST00000427506 VCX3AQ9NNX9 186 aa14.29□□□□□ -0.12
GPC1-205ENST00000427506 OR2W1Q9Y3N9 320 aa14.29□□□□□ -0.12
GPC1-205ENST00000427506 TRAV18A0A075B6X5 111 aa14.28□□□□□ -0.12
GPC1-205ENST00000427506 LINC01619G3V211 115 aa14.28□□□□□ -0.12
GPC1-205ENST00000427506 SSX5O60225 188 aa14.28□□□□□ -0.12
GPC1-205ENST00000427506 CRYZL1O95825 349 aa14.28□□□□□ -0.12
GPC1-205ENST00000427506 IGHV3-11P01762 117 aa14.28□□□□□ -0.12
GPC1-205ENST00000427506 TRGV3P03979 118 aa14.28□□□□□ -0.12
GPC1-205ENST00000427506 LGALS1P09382 135 aaKnown RBP14.28□□□□□ -0.12
GPC1-205ENST00000427506 ECI1P42126 302 aa14.28□□□□□ -0.12
GPC1-205ENST00000427506 DCTN2Q13561 401 aaKnown RBP14.28□□□□□ -0.12
GPC1-205ENST00000427506 VMA21Q3ZAQ7 101 aa14.28□□□□□ -0.12
GPC1-205ENST00000427506 ASPHD1Q5U4P2 390 aa14.28□□□□□ -0.12
GPC1-205ENST00000427506 ZNF645Q8N7E2 425 aa14.28□□□□□ -0.12
GPC1-205ENST00000427506 OR5T1Q8NG75 326 aa14.28□□□□□ -0.12
GPC1-205ENST00000427506 DCUN1D4Q92564 292 aa14.28□□□□□ -0.12
GPC1-205ENST00000427506 DCUN1D5Q9BTE7 237 aa14.28□□□□□ -0.12
GPC1-205ENST00000427506 SLA2Q9H6Q3 261 aa14.28□□□□□ -0.12
GPC1-205ENST00000427506 ANXA10Q9UJ72 324 aa14.28□□□□□ -0.12
GPC1-205ENST00000427506 SRRM4A7MD48 611 aaKnown RBP14.27□□□□□ -0.13
GPC1-205ENST00000427506 LINC00473A8K010 186 aa14.27□□□□□ -0.13
GPC1-205ENST00000427506 OVOL1O14753 267 aa14.27□□□□□ -0.13
GPC1-205ENST00000427506 TUSC2O75896 110 aa14.27□□□□□ -0.13
GPC1-205ENST00000427506 CRYGBP07316 175 aa14.27□□□□□ -0.13
GPC1-205ENST00000427506 ARPC4P59998 168 aa14.27□□□□□ -0.13
GPC1-205ENST00000427506 CD69Q07108 199 aa14.27□□□□□ -0.13
GPC1-205ENST00000427506 DDB2Q92466 427 aa14.27□□□□□ -0.13
GPC1-205ENST00000427506 SLC25A38Q96DW6 304 aa14.27□□□□□ -0.13
GPC1-205ENST00000427506 DIABLOQ9NR28 239 aa14.27□□□□□ -0.13
GPC1-205ENST00000427506 SCOCQ9UIL1 159 aa14.27□□□□□ -0.13
GPC1-205ENST00000427506 IGHV4OR15-8A0A075B7B6 117 aa14.26□□□□□ -0.13
GPC1-205ENST00000427506 A0A087WW49 117 aa14.26□□□□□ -0.13
GPC1-205ENST00000427506 A0A087WXM4 84 aa14.26□□□□□ -0.13
GPC1-205ENST00000427506 SLC22A5O76082 557 aa14.26□□□□□ -0.13
GPC1-205ENST00000427506 HLA-DQB1P01920 261 aa14.26□□□□□ -0.13
GPC1-205ENST00000427506 INSL3P51460 131 aa14.26□□□□□ -0.13
GPC1-205ENST00000427506 SLURP1P55000 103 aa14.26□□□□□ -0.13
GPC1-205ENST00000427506 KCTD9Q7L273 389 aa14.26□□□□□ -0.13
GPC1-205ENST00000427506 POC5Q8NA72 575 aa14.26□□□□□ -0.13
GPC1-205ENST00000427506 TSPAN14Q8NG11 270 aa14.26□□□□□ -0.13
GPC1-205ENST00000427506 PRR25Q96S07 402 aa14.26□□□□□ -0.13
GPC1-205ENST00000427506 PHB2Q99623 299 aa14.26□□□□□ -0.13
GPC1-205ENST00000427506 PRELID3BQ9Y3B1 194 aa14.26□□□□□ -0.13
GPC1-205ENST00000427506 DNAH3Q8TD57 4116 aa14.25□□□□□ -0.13
GPC1-205ENST00000427506 A0A0A6YYH2 397 aa14.25□□□□□ -0.13
GPC1-205ENST00000427506 A6NJ64 397 aa14.25□□□□□ -0.13
GPC1-205ENST00000427506 AIREO43918 545 aa14.25□□□□□ -0.13
GPC1-205ENST00000427506 FCGR3BO75015 233 aa14.25□□□□□ -0.13
GPC1-205ENST00000427506 TNFAIP8O95379 198 aa14.25□□□□□ -0.13
GPC1-205ENST00000427506 UBE2KP61086 200 aa14.25□□□□□ -0.13
GPC1-205ENST00000427506 TNXAQ16473 311 aa14.25□□□□□ -0.13
GPC1-205ENST00000427506 TEX45Q8NA69 505 aa14.25□□□□□ -0.13
GPC1-205ENST00000427506 BEST4Q8NFU0 473 aa14.25□□□□□ -0.13
GPC1-205ENST00000427506 OSR1Q8TAX0 266 aaPredicted RBP14.25□□□□□ -0.13
GPC1-205ENST00000427506 DLX4Q92988 240 aaPredicted RBP14.25□□□□□ -0.13
GPC1-205ENST00000427506 RHOVQ96L33 236 aa14.25□□□□□ -0.13
GPC1-205ENST00000427506 TMEM68Q96MH6 324 aa14.25□□□□□ -0.13
GPC1-205ENST00000427506 SPATA2Q9UM82 520 aa14.25□□□□□ -0.13
GPC1-205ENST00000427506 MRPS7Q9Y2R9 242 aaKnown RBP14.25□□□□□ -0.13
GPC1-205ENST00000427506 RBMX2Q9Y388 322 aaKnown RBP14.25□□□□□ -0.13
GPC1-205ENST00000427506 C13orf42A0A1B0GVH6 325 aa14.24□□□□□ -0.13
GPC1-205ENST00000427506 H3BUA1 57 aa14.24□□□□□ -0.13
GPC1-205ENST00000427506 TMEM127O75204 238 aa14.24□□□□□ -0.13
GPC1-205ENST00000427506 SAP30O75446 220 aa14.24□□□□□ -0.13
GPC1-205ENST00000427506 LY86O95711 162 aa14.24□□□□□ -0.13
GPC1-205ENST00000427506 HSPB1P04792 205 aaKnown RBP14.24□□□□□ -0.13
GPC1-205ENST00000427506 TGFBR1P36897 503 aa14.24□□□□□ -0.13
GPC1-205ENST00000427506 LSM3P62310 102 aaKnown RBP14.24□□□□□ -0.13
GPC1-205ENST00000427506 SSBP2P81877 361 aaPredicted RBP14.24□□□□□ -0.13
GPC1-205ENST00000427506 OR2B11Q5JQS5 317 aa14.24□□□□□ -0.13
GPC1-205ENST00000427506 IDO2Q6ZQW0 420 aa14.24□□□□□ -0.13
GPC1-205ENST00000427506 CROCCP3Q8IVE0 287 aa14.24□□□□□ -0.13
GPC1-205ENST00000427506 GVQW1Q8N7I0 195 aa14.24□□□□□ -0.13
GPC1-205ENST00000427506 ACOT12Q8WYK0 555 aa14.24□□□□□ -0.13
GPC1-205ENST00000427506 IGKV1D-13A0A0B4J2D9 117 aa14.23□□□□□ -0.13
GPC1-205ENST00000427506 A0A0G2JLM5 398 aa14.23□□□□□ -0.13
GPC1-205ENST00000427506 MSGN1A6NI15 193 aa14.23□□□□□ -0.13
GPC1-205ENST00000427506 MPPED1O15442 326 aa14.23□□□□□ -0.13
GPC1-205ENST00000427506 FCER2P06734 321 aa14.23□□□□□ -0.13
GPC1-205ENST00000427506 APELAP0DMC3 54 aa14.23□□□□□ -0.13
GPC1-205ENST00000427506 IGKV1-13P0DP09 117 aa14.23□□□□□ -0.13
GPC1-205ENST00000427506 PRSS8Q16651 343 aa14.23□□□□□ -0.13
GPC1-205ENST00000427506 ZNF429Q86V71 674 aa14.23□□□□□ -0.13
GPC1-205ENST00000427506 HOGA1Q86XE5 327 aa14.23□□□□□ -0.13
GPC1-205ENST00000427506 TCTEX1D2Q8WW35 142 aa14.23□□□□□ -0.13
GPC1-205ENST00000427506 YIPF6Q96EC8 236 aa14.23□□□□□ -0.13
GPC1-205ENST00000427506 B9D2Q9BPU9 175 aa14.23□□□□□ -0.13
GPC1-205ENST00000427506 AUNIPQ9H7T9 357 aa14.23□□□□□ -0.13
GPC1-205ENST00000427506 COA4Q9NYJ1 87 aa14.23□□□□□ -0.13
GPC1-205ENST00000427506 ZNF256Q9Y2P7 627 aaPredicted RBP14.23□□□□□ -0.13
GPC1-205ENST00000427506 CREBL2O60519 120 aaPredicted RBP14.22□□□□□ -0.13
GPC1-205ENST00000427506 ACTL6BO94805 426 aa14.22□□□□□ -0.13
GPC1-205ENST00000427506 FCGR2CP31995 323 aa14.22□□□□□ -0.13
GPC1-205ENST00000427506 RPL30P62888 115 aaKnown RBP14.22□□□□□ -0.13
GPC1-205ENST00000427506 S100A16Q96FQ6 103 aaKnown RBP14.22□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms