RNA–Protein interactions for RNA: ENST00000423567.1

USP49-204, Transcript of ubiquitin specific peptidase 49, humanhuman

TSL 2

Gene USP49, Length 752 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP49-204ENST00000423567 CDK10Q15131 360 aa8.58□□□□□ -1.04
USP49-204ENST00000423567 TMEM177Q53S58 311 aa8.58□□□□□ -1.04
USP49-204ENST00000423567 ZNF562Q6V9R5 426 aa8.58□□□□□ -1.04
USP49-204ENST00000423567 C8orf86Q6ZUL3 223 aa8.58□□□□□ -1.04
USP49-204ENST00000423567 KCTD9Q7L273 389 aa8.58□□□□□ -1.04
USP49-204ENST00000423567 C1QL4Q86Z23 238 aa8.58□□□□□ -1.04
USP49-204ENST00000423567 RNF152Q8N8N0 203 aa8.58□□□□□ -1.04
USP49-204ENST00000423567 OR5AP2Q8NGF4 316 aa8.58□□□□□ -1.04
USP49-204ENST00000423567 OSR1Q8TAX0 266 aaPredicted RBP8.58□□□□□ -1.04
USP49-204ENST00000423567 C5orf30Q96GV9 206 aa8.58□□□□□ -1.04
USP49-204ENST00000423567 HSD17B10Q99714 261 aaKnown RBP8.58□□□□□ -1.04
USP49-204ENST00000423567 DCUN1D5Q9BTE7 237 aa8.58□□□□□ -1.04
USP49-204ENST00000423567 A3GALT2U3KPV4 340 aa8.58□□□□□ -1.04
USP49-204ENST00000423567 IGKV1D-13A0A0B4J2D9 117 aa8.57□□□□□ -1.04
USP49-204ENST00000423567 LINC00473A8K010 186 aa8.57□□□□□ -1.04
USP49-204ENST00000423567 FCN1O00602 326 aa8.57□□□□□ -1.04
USP49-204ENST00000423567 CREBL2O60519 120 aaPredicted RBP8.57□□□□□ -1.04
USP49-204ENST00000423567 FCGR3BO75015 233 aa8.57□□□□□ -1.04
USP49-204ENST00000423567 PPYP01298 95 aa8.57□□□□□ -1.04
USP49-204ENST00000423567 IGKV1-13P0DP09 117 aa8.57□□□□□ -1.04
USP49-204ENST00000423567 PSMB8P28062 276 aa8.57□□□□□ -1.04
USP49-204ENST00000423567 CDX1P47902 265 aaPredicted RBP8.57□□□□□ -1.04
USP49-204ENST00000423567 HERV-K104P61576 105 aa8.57□□□□□ -1.04
USP49-204ENST00000423567 GNB1P62873 340 aa8.57□□□□□ -1.04
USP49-204ENST00000423567 FXYD3Q14802 87 aa8.57□□□□□ -1.04
USP49-204ENST00000423567 PYHIN1Q6K0P9 492 aa8.57□□□□□ -1.04
USP49-204ENST00000423567 UNQ5815/PRO19632Q6UWF5 114 aa8.57□□□□□ -1.04
USP49-204ENST00000423567 ZNF66Q6ZN08 573 aa8.57□□□□□ -1.04
USP49-204ENST00000423567 LCNL1Q6ZST4 164 aa8.57□□□□□ -1.04
USP49-204ENST00000423567 PPP1R27Q86WC6 154 aa8.57□□□□□ -1.04
USP49-204ENST00000423567 CLVS1Q8IUQ0 354 aaPredicted RBP8.57□□□□□ -1.04
USP49-204ENST00000423567 RAB2BQ8WUD1 216 aa8.57□□□□□ -1.04
USP49-204ENST00000423567 SECTM1Q8WVN6 248 aa8.57□□□□□ -1.04
USP49-204ENST00000423567 TCTEX1D2Q8WW35 142 aa8.57□□□□□ -1.04
USP49-204ENST00000423567 DDB2Q92466 427 aa8.57□□□□□ -1.04
USP49-204ENST00000423567 ARPC1AQ92747 370 aa8.57□□□□□ -1.04
USP49-204ENST00000423567 SNAPC3Q92966 411 aa8.57□□□□□ -1.04
USP49-204ENST00000423567 BORCS5Q969J3 196 aa8.57□□□□□ -1.04
USP49-204ENST00000423567 RCC1LQ96I51 464 aaKnown RBP8.57□□□□□ -1.04
USP49-204ENST00000423567 SCPEP1Q9HB40 452 aa8.57□□□□□ -1.04
USP49-204ENST00000423567 EHFQ9NZC4 300 aa8.57□□□□□ -1.04
USP49-204ENST00000423567 FOXA2Q9Y261 457 aaPredicted RBP8.57□□□□□ -1.04
USP49-204ENST00000423567 A0A1W2PN81 502 aa8.56□□□□□ -1.04
USP49-204ENST00000423567 G3V4G9 280 aa8.56□□□□□ -1.04
USP49-204ENST00000423567 HPGDSO60760 199 aa8.56□□□□□ -1.04
USP49-204ENST00000423567 DUS4LO95620 317 aaKnown RBP8.56□□□□□ -1.04
USP49-204ENST00000423567 IGLV2-23P01705 113 aa8.56□□□□□ -1.04
USP49-204ENST00000423567 ELK1P19419 428 aa8.56□□□□□ -1.04
USP49-204ENST00000423567 AADACP22760 399 aa8.56□□□□□ -1.04
USP49-204ENST00000423567 PPIFP30405 207 aaKnown RBP8.56□□□□□ -1.04
USP49-204ENST00000423567 CHRNA7P36544 502 aa8.56□□□□□ -1.04
USP49-204ENST00000423567 KIR2DS2P43631 304 aa8.56□□□□□ -1.04
USP49-204ENST00000423567 RPL5P46777 297 aaKnown RBP8.56□□□□□ -1.04
USP49-204ENST00000423567 CRIP2P52943 208 aaPredicted RBP8.56□□□□□ -1.04
USP49-204ENST00000423567 FXYD4P59646 89 aa8.56□□□□□ -1.04
USP49-204ENST00000423567 UBE2KP61086 200 aa8.56□□□□□ -1.04
USP49-204ENST00000423567 NDPQ00604 133 aa8.56□□□□□ -1.04
USP49-204ENST00000423567 CATR1Q13166 79 aa8.56□□□□□ -1.04
USP49-204ENST00000423567 MSMO1Q15800 293 aa8.56□□□□□ -1.04
USP49-204ENST00000423567 ACTBL2Q562R1 376 aa8.56□□□□□ -1.04
USP49-204ENST00000423567 SNX29P2Q8IUI4 249 aa8.56□□□□□ -1.04
USP49-204ENST00000423567 TEX45Q8NA69 505 aa8.56□□□□□ -1.04
USP49-204ENST00000423567 MINDY2Q8NBR6 621 aa8.56□□□□□ -1.04
USP49-204ENST00000423567 ZBTB34Q8NCN2 500 aa8.56□□□□□ -1.04
USP49-204ENST00000423567 WFDC9Q8NEX5 89 aa8.56□□□□□ -1.04
USP49-204ENST00000423567 OR5M8Q8NGP6 311 aa8.56□□□□□ -1.04
USP49-204ENST00000423567 OR5H2Q8NGV7 314 aa8.56□□□□□ -1.04
USP49-204ENST00000423567 OR4S2Q8NH73 311 aa8.56□□□□□ -1.04
USP49-204ENST00000423567 GRPEL2Q8TAA5 225 aa8.56□□□□□ -1.04
USP49-204ENST00000423567 GIMAP1Q8WWP7 306 aa8.56□□□□□ -1.04
USP49-204ENST00000423567 BCL7BQ9BQE9 202 aa8.56□□□□□ -1.04
USP49-204ENST00000423567 FAM103A1Q9BTL3 118 aaKnown RBP8.56□□□□□ -1.04
USP49-204ENST00000423567 MCRIP2Q9BUT9 160 aaKnown RBP8.56□□□□□ -1.04
USP49-204ENST00000423567 GPR61Q9BZJ8 451 aa8.56□□□□□ -1.04
USP49-204ENST00000423567 SLC5A7Q9GZV3 580 aa8.56□□□□□ -1.04
USP49-204ENST00000423567 TAS2R8Q9NYW2 309 aa8.56□□□□□ -1.04
USP49-204ENST00000423567 ACTL6BO94805 426 aa8.55□□□□□ -1.04
USP49-204ENST00000423567 IGLV1-40P01703 118 aa8.55□□□□□ -1.04
USP49-204ENST00000423567 PMP2P02689 132 aa8.55□□□□□ -1.04
USP49-204ENST00000423567 RAB9AP51151 201 aa8.55□□□□□ -1.04
USP49-204ENST00000423567 TMBIM6P55061 237 aa8.55□□□□□ -1.04
USP49-204ENST00000423567 RAB25P57735 213 aa8.55□□□□□ -1.04
USP49-204ENST00000423567 AKIRIN2Q53H80 203 aa8.55□□□□□ -1.04
USP49-204ENST00000423567 OR2B11Q5JQS5 317 aa8.55□□□□□ -1.04
USP49-204ENST00000423567 C18orf65Q6ZTR6 163 aa8.55□□□□□ -1.04
USP49-204ENST00000423567 OVCH2Q7RTZ1 564 aa8.55□□□□□ -1.04
USP49-204ENST00000423567 TMEM17Q86X19 198 aa8.55□□□□□ -1.04
USP49-204ENST00000423567 MRPL41Q8IXM3 137 aaKnown RBP8.55□□□□□ -1.04
USP49-204ENST00000423567 MFSD4AQ8N468 514 aa8.55□□□□□ -1.04
USP49-204ENST00000423567 LFNGQ8NES3 379 aa8.55□□□□□ -1.04
USP49-204ENST00000423567 GPX8Q8TED1 209 aa8.55□□□□□ -1.04
USP49-204ENST00000423567 C15orf40Q8WUR7 153 aa8.55□□□□□ -1.04
USP49-204ENST00000423567 C4orf3Q8WVX3 66 aa8.55□□□□□ -1.04
USP49-204ENST00000423567 DPF1Q92782 380 aa8.55□□□□□ -1.04
USP49-204ENST00000423567 UBE2E2Q96LR5 201 aa8.55□□□□□ -1.04
USP49-204ENST00000423567 TMEM68Q96MH6 324 aa8.55□□□□□ -1.04
USP49-204ENST00000423567 PHB2Q99623 299 aa8.55□□□□□ -1.04
USP49-204ENST00000423567 CCL28Q9NRJ3 127 aa8.55□□□□□ -1.04
USP49-204ENST00000423567 TPSG1Q9NRR2 321 aa8.55□□□□□ -1.04
USP49-204ENST00000423567 ADAM30Q9UKF2 790 aa8.55□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 228 ms