RNA–Protein interactions for RNA: ENST00000421756.5

MCF2L-213, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

TSL 1 (best) BASIC

Gene MCF2L, Length 3,560 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-213ENST00000421756 ZNF645Q8N7E2 425 aa11.13□□□□□ -0.63
MCF2L-213ENST00000421756 FAM216BQ8N7L0 139 aa11.13□□□□□ -0.63
MCF2L-213ENST00000421756 TVP23CQ96ET8 276 aa11.13□□□□□ -0.63
MCF2L-213ENST00000421756 CHRNA7P36544 502 aa11.13□□□□□ -0.63
MCF2L-213ENST00000421756 ZNF134P52741 427 aa11.13□□□□□ -0.63
MCF2L-213ENST00000421756 BRWD1-AS2P59051 145 aa11.13□□□□□ -0.63
MCF2L-213ENST00000421756 RHEBQ15382 184 aa11.13□□□□□ -0.63
MCF2L-213ENST00000421756 ZNF474Q6S9Z5 364 aaPredicted RBP11.13□□□□□ -0.63
MCF2L-213ENST00000421756 CTNNBIP1Q9NSA3 81 aaPredicted RBP11.13□□□□□ -0.63
MCF2L-213ENST00000421756 DKK4Q9UBT3 224 aa11.13□□□□□ -0.63
MCF2L-213ENST00000421756 MSMO1Q15800 293 aa11.12□□□□□ -0.63
MCF2L-213ENST00000421756 OR4A16Q8NH70 328 aa11.12□□□□□ -0.63
MCF2L-213ENST00000421756 LYPD6BQ8NI32 183 aa11.12□□□□□ -0.63
MCF2L-213ENST00000421756 CABLES2Q9BTV7 478 aa11.12□□□□□ -0.63
MCF2L-213ENST00000421756 IGKV1D-17A0A075B6S4 117 aa11.12□□□□□ -0.63
MCF2L-213ENST00000421756 PRR33A8MZF0 331 aa11.12□□□□□ -0.63
MCF2L-213ENST00000421756 TNFSF13O75888 250 aa11.12□□□□□ -0.63
MCF2L-213ENST00000421756 HMGN3Q15651 99 aa11.12□□□□□ -0.63
MCF2L-213ENST00000421756 CDPF1Q6NVV7 123 aa11.12□□□□□ -0.63
MCF2L-213ENST00000421756 SPNS3Q6ZMD2 512 aa11.12□□□□□ -0.63
MCF2L-213ENST00000421756 SEM1Q6ZVN7 128 aa11.12□□□□□ -0.63
MCF2L-213ENST00000421756 WDR61Q9GZS3 305 aaKnown RBP11.12□□□□□ -0.63
MCF2L-213ENST00000421756 A0A1W2PPQ1 181 aa11.12□□□□□ -0.63
MCF2L-213ENST00000421756 LRRC30A6NM36 301 aa11.12□□□□□ -0.63
MCF2L-213ENST00000421756 TMPRSS2O15393 492 aa11.12□□□□□ -0.63
MCF2L-213ENST00000421756 RNF212Q495C1 297 aa11.12□□□□□ -0.63
MCF2L-213ENST00000421756 ASPHD1Q5U4P2 390 aa11.12□□□□□ -0.63
MCF2L-213ENST00000421756 C1QTNF9BB2RNN3 333 aa11.11□□□□□ -0.63
MCF2L-213ENST00000421756 BCL2P10415 239 aa11.11□□□□□ -0.63
MCF2L-213ENST00000421756 SLC25A6P12236 298 aa11.11□□□□□ -0.63
MCF2L-213ENST00000421756 SNX22Q96L94 193 aa11.11□□□□□ -0.63
MCF2L-213ENST00000421756 WASF3Q9UPY6 502 aa11.11□□□□□ -0.63
MCF2L-213ENST00000421756 TM4SF5O14894 197 aa11.11□□□□□ -0.63
MCF2L-213ENST00000421756 HOXA1P49639 335 aaPredicted RBP11.11□□□□□ -0.63
MCF2L-213ENST00000421756 LHFPL4Q7Z7J7 247 aa11.11□□□□□ -0.63
MCF2L-213ENST00000421756 GCSAMQ8N6F7 178 aa11.11□□□□□ -0.63
MCF2L-213ENST00000421756 H1FXQ92522 213 aaKnown RBP11.11□□□□□ -0.63
MCF2L-213ENST00000421756 LOXL4Q96JB6 756 aa11.11□□□□□ -0.63
MCF2L-213ENST00000421756 ELOVL1Q9BW60 279 aa11.11□□□□□ -0.63
MCF2L-213ENST00000421756 DCHS2Q6V1P9 2916 aa11.11□□□□□ -0.63
MCF2L-213ENST00000421756 IGKV3-15P01624 115 aa11.11□□□□□ -0.63
MCF2L-213ENST00000421756 GATA2P23769 480 aaPredicted RBP11.11□□□□□ -0.63
MCF2L-213ENST00000421756 MOB1BQ7L9L4 216 aa11.11□□□□□ -0.63
MCF2L-213ENST00000421756 MOB3BQ86TA1 216 aa11.11□□□□□ -0.63
MCF2L-213ENST00000421756 CCL17Q92583 94 aa11.11□□□□□ -0.63
MCF2L-213ENST00000421756 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP11.1□□□□□ -0.63
MCF2L-213ENST00000421756 RRHO14718 337 aa11.1□□□□□ -0.63
MCF2L-213ENST00000421756 S100PP25815 95 aa11.1□□□□□ -0.63
MCF2L-213ENST00000421756 Q6ZS49 121 aa11.1□□□□□ -0.63
MCF2L-213ENST00000421756 LINC00596Q86U02 117 aa11.1□□□□□ -0.63
MCF2L-213ENST00000421756 RAB24Q969Q5 203 aa11.1□□□□□ -0.63
MCF2L-213ENST00000421756 GPR61Q9BZJ8 451 aa11.1□□□□□ -0.63
MCF2L-213ENST00000421756 CACNA1AO00555 2505 aa11.1□□□□□ -0.63
MCF2L-213ENST00000421756 AQP7O14520 342 aa11.1□□□□□ -0.63
MCF2L-213ENST00000421756 PROP1O75360 226 aa11.1□□□□□ -0.63
MCF2L-213ENST00000421756 MMP23AO75900 390 aa11.1□□□□□ -0.63
MCF2L-213ENST00000421756 HBE1P02100 147 aa11.1□□□□□ -0.63
MCF2L-213ENST00000421756 KLF3P57682 345 aaPredicted RBP11.1□□□□□ -0.63
MCF2L-213ENST00000421756 C1orf229Q6ZS94 237 aaPredicted RBP11.1□□□□□ -0.63
MCF2L-213ENST00000421756 COMMD1Q8N668 190 aa11.1□□□□□ -0.63
MCF2L-213ENST00000421756 MBNL3Q9NUK0 354 aaKnown RBP11.1□□□□□ -0.63
MCF2L-213ENST00000421756 COA4Q9NYJ1 87 aa11.1□□□□□ -0.63
MCF2L-213ENST00000421756 RNF212BA8MTL3 300 aa11.1□□□□□ -0.63
MCF2L-213ENST00000421756 CLN5O75503 358 aa11.1□□□□□ -0.63
MCF2L-213ENST00000421756 LRRC75BQ2VPJ9 315 aa11.1□□□□□ -0.63
MCF2L-213ENST00000421756 MIC13Q5XKP0 118 aa11.1□□□□□ -0.63
MCF2L-213ENST00000421756 DERL1Q9BUN8 251 aa11.1□□□□□ -0.63
MCF2L-213ENST00000421756 DOK5Q9P104 306 aa11.1□□□□□ -0.63
MCF2L-213ENST00000421756 LAMP3Q9UQV4 416 aa11.1□□□□□ -0.63
MCF2L-213ENST00000421756 TRAV20A0A0B4J274 112 aa11.09□□□□□ -0.63
MCF2L-213ENST00000421756 A0A1W2PPV4 95 aa11.09□□□□□ -0.63
MCF2L-213ENST00000421756 OR8U8P0C7N1 319 aa11.09□□□□□ -0.63
MCF2L-213ENST00000421756 EIF2S3P41091 472 aaKnown RBP11.09□□□□□ -0.63
MCF2L-213ENST00000421756 FAM3BP58499 235 aaPredicted RBP11.09□□□□□ -0.63
MCF2L-213ENST00000421756 MLANAQ16655 118 aa11.09□□□□□ -0.63
MCF2L-213ENST00000421756 OR10D4PQ8NGN7 298 aa11.09□□□□□ -0.63
MCF2L-213ENST00000421756 MRPL37Q9BZE1 423 aaKnown RBP11.09□□□□□ -0.63
MCF2L-213ENST00000421756 LOC102723971A0A1B0GUV8 181 aa11.09□□□□□ -0.63
MCF2L-213ENST00000421756 NDUFA2O43678 99 aa11.09□□□□□ -0.63
MCF2L-213ENST00000421756 SPINK4O60575 86 aa11.09□□□□□ -0.63
MCF2L-213ENST00000421756 ELOBQ15370 118 aa11.09□□□□□ -0.63
MCF2L-213ENST00000421756 PDLIM3Q53GG5 364 aaPredicted RBP11.09□□□□□ -0.63
MCF2L-213ENST00000421756 PRR31Q5SQ13 230 aa11.09□□□□□ -0.63
MCF2L-213ENST00000421756 SNIP1Q8TAD8 396 aaKnown RBP11.09□□□□□ -0.63
MCF2L-213ENST00000421756 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP11.09□□□□□ -0.638e-7■■■□□ 15.1
MCF2L-213ENST00000421756 C9orf152Q5JTZ5 239 aa11.08□□□□□ -0.63
MCF2L-213ENST00000421756 TMEM37Q8WXS4 190 aa11.08□□□□□ -0.63
MCF2L-213ENST00000421756 S1PR3Q99500 378 aa11.08□□□□□ -0.63
MCF2L-213ENST00000421756 UNKLQ9H9P5 680 aaKnown RBP11.08□□□□□ -0.63
MCF2L-213ENST00000421756 LINC00587B1AMM8 73 aa11.08□□□□□ -0.64
MCF2L-213ENST00000421756 FABP4P15090 132 aa11.08□□□□□ -0.64
MCF2L-213ENST00000421756 ERVK-16P61578 105 aa11.08□□□□□ -0.64
MCF2L-213ENST00000421756 TNFAIP6P98066 277 aaPredicted RBP11.08□□□□□ -0.64
MCF2L-213ENST00000421756 PRR30Q53SZ7 412 aaPredicted RBP11.08□□□□□ -0.64
MCF2L-213ENST00000421756 MIOXQ9UGB7 285 aa11.08□□□□□ -0.64
MCF2L-213ENST00000421756 CENPEQ02224 2701 aa11.08□□□□□ -0.64
MCF2L-213ENST00000421756 IGHV3-72A0A0B4J1Y9 119 aa11.08□□□□□ -0.64
MCF2L-213ENST00000421756 LSM10Q969L4 123 aaKnown RBP11.08□□□□□ -0.64
MCF2L-213ENST00000421756 FAM210BQ96KR6 192 aa11.08□□□□□ -0.64
MCF2L-213ENST00000421756 LY86O95711 162 aa11.07□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 45.8 ms