RNA–Protein interactions for RNA: ENST00000421223.5

DDX56-203, Transcript of DEAD-box helicase 56, humanhuman

TSL 2

Gene DDX56, Length 3,028 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX56-203ENST00000421223 SPACA3Q8IXA5 215 aa9.1□□□□□ -0.95
DDX56-203ENST00000421223 ZNF525Q8N782 197 aa9.1□□□□□ -0.95
DDX56-203ENST00000421223 PRR7Q8TB68 274 aa9.1□□□□□ -0.95
DDX56-203ENST00000421223 DTD1Q8TEA8 209 aa9.1□□□□□ -0.95
DDX56-203ENST00000421223 LURAP1Q96LR2 239 aa9.1□□□□□ -0.95
DDX56-203ENST00000421223 SFXN3Q9BWM7 321 aa9.1□□□□□ -0.95
DDX56-203ENST00000421223 EGLN1Q9GZT9 426 aa9.1□□□□□ -0.95
DDX56-203ENST00000421223 ZNF665Q9H7R5 613 aa9.1□□□□□ -0.95
DDX56-203ENST00000421223 GCM1Q9NP62 436 aa9.1□□□□□ -0.95
DDX56-203ENST00000421223 ZNRD1Q9P1U0 126 aa9.1□□□□□ -0.95
DDX56-203ENST00000421223 DSCAMO60469 2012 aa9.1□□□□□ -0.95
DDX56-203ENST00000421223 A0A1W2PPE2 198 aa9.1□□□□□ -0.95
DDX56-203ENST00000421223 IGHV1-46P01743 117 aa9.1□□□□□ -0.95
DDX56-203ENST00000421223 OPN1MWP04001 364 aa9.1□□□□□ -0.95
DDX56-203ENST00000421223 OPN1MW2P0DN77 364 aa9.1□□□□□ -0.95
DDX56-203ENST00000421223 OPN1MW3P0DN78 364 aa9.1□□□□□ -0.95
DDX56-203ENST00000421223 IRF2P14316 349 aa9.1□□□□□ -0.95
DDX56-203ENST00000421223 CD200P41217 278 aa9.1□□□□□ -0.95
DDX56-203ENST00000421223 RAB2AP61019 212 aa9.1□□□□□ -0.95
DDX56-203ENST00000421223 MORN2Q502X0 79 aa9.1□□□□□ -0.95
DDX56-203ENST00000421223 FAM90A1Q86YD7 464 aa9.1□□□□□ -0.95
DDX56-203ENST00000421223 LYG1Q8N1E2 194 aa9.1□□□□□ -0.95
DDX56-203ENST00000421223 CCL17Q92583 94 aa9.1□□□□□ -0.95
DDX56-203ENST00000421223 SNX22Q96L94 193 aa9.1□□□□□ -0.95
DDX56-203ENST00000421223 BIN3Q9NQY0 253 aa9.1□□□□□ -0.95
DDX56-203ENST00000421223 COA4Q9NYJ1 87 aa9.1□□□□□ -0.95
DDX56-203ENST00000421223 RNF7Q9UBF6 113 aa9.1□□□□□ -0.95
DDX56-203ENST00000421223 URGCP-MRPS24S4R325 110 aa9.1□□□□□ -0.95
DDX56-203ENST00000421223 AKAP6Q13023 2319 aa9.09□□□□□ -0.95
DDX56-203ENST00000421223 C15orf65H3BRN8 121 aa9.09□□□□□ -0.95
DDX56-203ENST00000421223 GATCO43716 136 aaKnown RBP9.09□□□□□ -0.95
DDX56-203ENST00000421223 ACAA1P09110 424 aaPredicted RBP9.09□□□□□ -0.95
DDX56-203ENST00000421223 TUBG1P23258 451 aa9.09□□□□□ -0.95
DDX56-203ENST00000421223 RAB11AP62491 216 aa9.09□□□□□ -0.95
DDX56-203ENST00000421223 TMEM108Q6UXF1 575 aa9.09□□□□□ -0.95
DDX56-203ENST00000421223 FAM24BQ8N5W8 94 aa9.09□□□□□ -0.95
DDX56-203ENST00000421223 CYB561D1Q8N8Q1 229 aa9.09□□□□□ -0.95
DDX56-203ENST00000421223 EDARADDQ8WWZ3 215 aa9.09□□□□□ -0.95
DDX56-203ENST00000421223 QTRT1Q9BXR0 403 aaKnown RBP9.09□□□□□ -0.95
DDX56-203ENST00000421223 TUBG2Q9NRH3 451 aa9.09□□□□□ -0.95
DDX56-203ENST00000421223 SMCO4Q9NRQ5 59 aa9.09□□□□□ -0.95
DDX56-203ENST00000421223 CALYQ9NYX4 217 aa9.09□□□□□ -0.95
DDX56-203ENST00000421223 MED13LQ71F56 2210 aa9.09□□□□□ -0.95
DDX56-203ENST00000421223 PIGBOS1A0A0B4J2F0 54 aa9.09□□□□□ -0.95
DDX56-203ENST00000421223 A0A1W2PPH5 198 aa9.09□□□□□ -0.95
DDX56-203ENST00000421223 ZNF727A8MUV8 499 aa9.09□□□□□ -0.95
DDX56-203ENST00000421223 PROP1O75360 226 aa9.09□□□□□ -0.95
DDX56-203ENST00000421223 IFNA10P01566 189 aa9.09□□□□□ -0.95
DDX56-203ENST00000421223 TNFSF4P23510 183 aa9.09□□□□□ -0.95
DDX56-203ENST00000421223 NKX6-1P78426 367 aaPredicted RBP9.09□□□□□ -0.95
DDX56-203ENST00000421223 ZNF787Q6DD87 383 aa9.09□□□□□ -0.95
DDX56-203ENST00000421223 LFNGQ8NES3 379 aa9.09□□□□□ -0.95
DDX56-203ENST00000421223 AGMATQ9BSE5 352 aa9.09□□□□□ -0.95
DDX56-203ENST00000421223 ADH4P08319 380 aa9.08□□□□□ -0.96
DDX56-203ENST00000421223 OR4A8P0C604 315 aa9.08□□□□□ -0.96
DDX56-203ENST00000421223 SLC25A6P12236 298 aa9.08□□□□□ -0.96
DDX56-203ENST00000421223 CCKARP32238 428 aa9.08□□□□□ -0.96
DDX56-203ENST00000421223 BSPH1Q075Z2 132 aa9.08□□□□□ -0.96
DDX56-203ENST00000421223 C15orf54Q8N8G6 183 aa9.08□□□□□ -0.96
DDX56-203ENST00000421223 KDF1Q8NAX2 398 aaPredicted RBP9.08□□□□□ -0.96
DDX56-203ENST00000421223 ZBTB34Q8NCN2 500 aa9.08□□□□□ -0.96
DDX56-203ENST00000421223 OR10P1Q8NGE3 313 aa9.08□□□□□ -0.96
DDX56-203ENST00000421223 OR4A16Q8NH70 328 aa9.08□□□□□ -0.96
DDX56-203ENST00000421223 HEYLQ9NQ87 328 aaPredicted RBP9.08□□□□□ -0.96
DDX56-203ENST00000421223 ZZEF1O43149 2961 aa9.08□□□□□ -0.96
DDX56-203ENST00000421223 TNCP24821 2201 aa9.08□□□□□ -0.96
DDX56-203ENST00000421223 TRAV3A0A0B4J244 114 aa9.08□□□□□ -0.96
DDX56-203ENST00000421223 TRGV8A0A0C4DH27 118 aa9.08□□□□□ -0.96
DDX56-203ENST00000421223 OR9G9P0C7N8 305 aa9.08□□□□□ -0.96
DDX56-203ENST00000421223 CEACAM8P31997 349 aaPredicted RBP9.08□□□□□ -0.96
DDX56-203ENST00000421223 RPS23P62266 143 aaKnown RBP9.08□□□□□ -0.96
DDX56-203ENST00000421223 S1PR3Q99500 378 aa9.08□□□□□ -0.96
DDX56-203ENST00000421223 HSD17B10Q99714 261 aaKnown RBP9.08□□□□□ -0.96
DDX56-203ENST00000421223 SLC25A22Q9H936 323 aa9.08□□□□□ -0.96
DDX56-203ENST00000421223 SLC39A9Q9NUM3 307 aa9.08□□□□□ -0.96
DDX56-203ENST00000421223 hCG_1809904A0A1W2PP81 198 aa9.07□□□□□ -0.96
DDX56-203ENST00000421223 A0A1W2PR64 198 aa9.07□□□□□ -0.96
DDX56-203ENST00000421223 A0A1W2PRV1 198 aa9.07□□□□□ -0.96
DDX56-203ENST00000421223 DPRXA6NFQ7 191 aa9.07□□□□□ -0.96
DDX56-203ENST00000421223 FGF7P21781 194 aa9.07□□□□□ -0.96
DDX56-203ENST00000421223 DUTP33316 252 aaKnown RBP9.07□□□□□ -0.96
DDX56-203ENST00000421223 HABP2Q14520 560 aaPredicted RBP9.07□□□□□ -0.96
DDX56-203ENST00000421223 SSX7Q7RTT5 188 aa9.07□□□□□ -0.96
DDX56-203ENST00000421223 H1FXQ92522 213 aaKnown RBP9.07□□□□□ -0.96
DDX56-203ENST00000421223 TRGV10A0A0A0MS01 117 aa9.07□□□□□ -0.96
DDX56-203ENST00000421223 C1QTNF9BB2RNN3 333 aa9.07□□□□□ -0.96
DDX56-203ENST00000421223 RD3LP0DJH9 198 aa9.07□□□□□ -0.96
DDX56-203ENST00000421223 ERVK-16P61578 105 aa9.07□□□□□ -0.96
DDX56-203ENST00000421223 TFF3Q07654 80 aa9.07□□□□□ -0.96
DDX56-203ENST00000421223 ZNF674Q2M3X9 581 aa9.07□□□□□ -0.96
DDX56-203ENST00000421223 Q8NA96 180 aa9.07□□□□□ -0.96
DDX56-203ENST00000421223 RND1Q92730 232 aa9.07□□□□□ -0.96
DDX56-203ENST00000421223 TAF15Q92804 592 aaKnown RBP eCLIP9.07□□□□□ -0.96
DDX56-203ENST00000421223 NEUROG1Q92886 237 aa9.07□□□□□ -0.96
DDX56-203ENST00000421223 LHX4Q969G2 390 aa9.07□□□□□ -0.96
DDX56-203ENST00000421223 HIST1H2BAQ96A08 127 aa9.07□□□□□ -0.96
DDX56-203ENST00000421223 SDSLQ96GA7 329 aa9.07□□□□□ -0.96
DDX56-203ENST00000421223 TMPRSS5Q9H3S3 457 aa9.07□□□□□ -0.96
DDX56-203ENST00000421223 H3BQ15 152 aa9.07□□□□□ -0.96
DDX56-203ENST00000421223 SOX15O60248 233 aa9.07□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms