RNA–Protein interactions for RNA: ENST00000419378.5

HMGN1-205, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 2

Gene HMGN1, Length 850 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-205ENST00000419378 KRTAP15-1Q3LI76 137 aa5.45□□□□□ -1.54
HMGN1-205ENST00000419378 TCTEX1D4Q5JR98 221 aa5.45□□□□□ -1.54
HMGN1-205ENST00000419378 SFXN4Q6P4A7 337 aa5.45□□□□□ -1.54
HMGN1-205ENST00000419378 C10orf99Q6UWK7 81 aa5.45□□□□□ -1.54
HMGN1-205ENST00000419378 ZNF66Q6ZN08 573 aa5.45□□□□□ -1.54
HMGN1-205ENST00000419378 Q8N9W7 124 aa5.45□□□□□ -1.54
HMGN1-205ENST00000419378 OR4X2Q8NGF9 303 aa5.45□□□□□ -1.54
HMGN1-205ENST00000419378 OR10R2Q8NGX6 335 aa5.45□□□□□ -1.54
HMGN1-205ENST00000419378 KCTD7Q96MP8 289 aa5.45□□□□□ -1.54
HMGN1-205ENST00000419378 S1PR3Q99500 378 aa5.45□□□□□ -1.54
HMGN1-205ENST00000419378 NABP2Q9BQ15 211 aa5.45□□□□□ -1.54
HMGN1-205ENST00000419378 ZNF251Q9BRH9 671 aa5.45□□□□□ -1.54
HMGN1-205ENST00000419378 ATG5Q9H1Y0 275 aa5.45□□□□□ -1.54
HMGN1-205ENST00000419378 RNF167Q9H6Y7 350 aa5.45□□□□□ -1.54
HMGN1-205ENST00000419378 PLSCR3Q9NRY6 295 aa5.45□□□□□ -1.54
HMGN1-205ENST00000419378 OR1A1Q9P1Q5 309 aa5.45□□□□□ -1.54
HMGN1-205ENST00000419378 DAPK2Q9UIK4 370 aa5.45□□□□□ -1.54
HMGN1-205ENST00000419378 TCRBV4S1A1TA0A5B7 111 aa5.44□□□□□ -1.54
HMGN1-205ENST00000419378 PSMB11A5LHX3 300 aa5.44□□□□□ -1.54
HMGN1-205ENST00000419378 METTL21EPA6NDL7 271 aa5.44□□□□□ -1.54
HMGN1-205ENST00000419378 CXorf65A6NEN9 183 aa5.44□□□□□ -1.54
HMGN1-205ENST00000419378 ITGB1BP1O14713 200 aa5.44□□□□□ -1.54
HMGN1-205ENST00000419378 RAB29O14966 203 aa5.44□□□□□ -1.54
HMGN1-205ENST00000419378 FABP7O15540 132 aa5.44□□□□□ -1.54
HMGN1-205ENST00000419378 HSPA12AO43301 675 aa5.44□□□□□ -1.54
HMGN1-205ENST00000419378 TNFAIP8O95379 198 aa5.44□□□□□ -1.54
HMGN1-205ENST00000419378 IGHG2P01859 326 aa5.44□□□□□ -1.54
HMGN1-205ENST00000419378 OPN1MWP04001 364 aa5.44□□□□□ -1.54
HMGN1-205ENST00000419378 OPN1MW2P0DN77 364 aa5.44□□□□□ -1.54
HMGN1-205ENST00000419378 OPN1MW3P0DN78 364 aa5.44□□□□□ -1.54
HMGN1-205ENST00000419378 CEACAM6P40199 344 aa5.44□□□□□ -1.54
HMGN1-205ENST00000419378 GPR12P47775 334 aa5.44□□□□□ -1.54
HMGN1-205ENST00000419378 F2RL1P55085 397 aa5.44□□□□□ -1.54
HMGN1-205ENST00000419378 RPP30P78346 268 aaKnown RBP5.44□□□□□ -1.54
HMGN1-205ENST00000419378 MXD1Q05195 221 aa5.44□□□□□ -1.54
HMGN1-205ENST00000419378 ARFRP1Q13795 201 aa5.44□□□□□ -1.54
HMGN1-205ENST00000419378 BAK1Q16611 211 aa5.44□□□□□ -1.54
HMGN1-205ENST00000419378 RPL39P5Q59GN2 51 aa5.44□□□□□ -1.54
HMGN1-205ENST00000419378 FAM71F2Q6NXP2 309 aa5.44□□□□□ -1.54
HMGN1-205ENST00000419378 SLC35E3Q7Z769 313 aa5.44□□□□□ -1.54
HMGN1-205ENST00000419378 FOXRED2Q8IWF2 684 aa5.44□□□□□ -1.54
HMGN1-205ENST00000419378 FAM71E2Q8N5Q1 922 aa5.44□□□□□ -1.54
HMGN1-205ENST00000419378 TMEM217Q8N7C4 229 aa5.44□□□□□ -1.54
HMGN1-205ENST00000419378 TSPAN14Q8NG11 270 aa5.44□□□□□ -1.54
HMGN1-205ENST00000419378 OR4F17Q8NGA8 305 aa5.44□□□□□ -1.54
HMGN1-205ENST00000419378 OR8H1Q8NGG4 311 aa5.44□□□□□ -1.54
HMGN1-205ENST00000419378 OR4A4PQ8NGN8 299 aa5.44□□□□□ -1.54
HMGN1-205ENST00000419378 LGALS14Q8TCE9 139 aa5.44□□□□□ -1.54
HMGN1-205ENST00000419378 DNAH3Q8TD57 4116 aa5.44□□□□□ -1.54
HMGN1-205ENST00000419378 MAFIPQ8WZ33 124 aa5.44□□□□□ -1.54
HMGN1-205ENST00000419378 DPF1Q92782 380 aa5.44□□□□□ -1.54
HMGN1-205ENST00000419378 ABHD14BQ96IU4 210 aa5.44□□□□□ -1.54
HMGN1-205ENST00000419378 NOL4LQ96MY1 436 aaPredicted RBP5.44□□□□□ -1.54
HMGN1-205ENST00000419378 OR4F4Q96R69 305 aa5.44□□□□□ -1.54
HMGN1-205ENST00000419378 RASL11BQ9BPW5 248 aa5.44□□□□□ -1.54
HMGN1-205ENST00000419378 AGMATQ9BSE5 352 aa5.44□□□□□ -1.54
HMGN1-205ENST00000419378 CABLES2Q9BTV7 478 aa5.44□□□□□ -1.54
HMGN1-205ENST00000419378 CENPOQ9BU64 300 aa5.44□□□□□ -1.54
HMGN1-205ENST00000419378 ABCG5Q9H222 651 aa5.44□□□□□ -1.54
HMGN1-205ENST00000419378 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP5.44□□□□□ -1.54
HMGN1-205ENST00000419378 PIPOXQ9P0Z9 390 aa5.44□□□□□ -1.54
HMGN1-205ENST00000419378 LINC00527Q9UJ94 153 aa5.44□□□□□ -1.54
HMGN1-205ENST00000419378 NOTCH3Q9UM47 2321 aa5.44□□□□□ -1.54
HMGN1-205ENST00000419378 A0A087WXM4 84 aa5.43□□□□□ -1.54
HMGN1-205ENST00000419378 KCNAB3O43448 404 aa5.43□□□□□ -1.54
HMGN1-205ENST00000419378 GSTT2P0CG29 244 aa5.43□□□□□ -1.54
HMGN1-205ENST00000419378 GSTT2BP0CG30 244 aa5.43□□□□□ -1.54
HMGN1-205ENST00000419378 CT45A6P0DMU7 189 aa5.43□□□□□ -1.54
HMGN1-205ENST00000419378 CT45A5P0DMU8 189 aa5.43□□□□□ -1.54
HMGN1-205ENST00000419378 CT45A7P0DMV0 189 aa5.43□□□□□ -1.54
HMGN1-205ENST00000419378 SERPINB10P48595 397 aa5.43□□□□□ -1.54
HMGN1-205ENST00000419378 ACTBP60709 375 aa5.43□□□□□ -1.54
HMGN1-205ENST00000419378 DEFA6Q01524 100 aa5.43□□□□□ -1.54
HMGN1-205ENST00000419378 KIR2DS1Q14954 304 aa5.43□□□□□ -1.54
HMGN1-205ENST00000419378 ARL6IP1Q15041 203 aa5.43□□□□□ -1.54
HMGN1-205ENST00000419378 MMDQ15546 238 aa5.43□□□□□ -1.54
HMGN1-205ENST00000419378 FAM131AQ6UXB0 335 aa5.43□□□□□ -1.54
HMGN1-205ENST00000419378 ZNF329Q86UD4 541 aa5.43□□□□□ -1.54
HMGN1-205ENST00000419378 STPG2Q8N412 459 aa5.43□□□□□ -1.54
HMGN1-205ENST00000419378 CHPT1Q8WUD6 406 aa5.43□□□□□ -1.54
HMGN1-205ENST00000419378 HSPB9Q9BQS6 159 aa5.43□□□□□ -1.54
HMGN1-205ENST00000419378 TOLLIPQ9H0E2 274 aa5.43□□□□□ -1.54
HMGN1-205ENST00000419378 GHITMQ9H3K2 345 aa5.43□□□□□ -1.54
HMGN1-205ENST00000419378 VCX3AQ9NNX9 186 aa5.43□□□□□ -1.54
HMGN1-205ENST00000419378 RHBDL2Q9NX52 303 aa5.43□□□□□ -1.54
HMGN1-205ENST00000419378 RDH8Q9NYR8 311 aa5.43□□□□□ -1.54
HMGN1-205ENST00000419378 ZNF230Q9UIE0 474 aaPredicted RBP5.43□□□□□ -1.54
HMGN1-205ENST00000419378 ELF5Q9UKW6 265 aaPredicted RBP5.43□□□□□ -1.54
HMGN1-205ENST00000419378 TSSC4Q9Y5U2 329 aaPredicted RBP5.43□□□□□ -1.54
HMGN1-205ENST00000419378 COX11Q9Y6N1 276 aa5.43□□□□□ -1.54
HMGN1-205ENST00000419378 IGKV1D-8A0A087WSZ0 117 aa5.42□□□□□ -1.54
HMGN1-205ENST00000419378 TRBV6-7A0A0A0MS04 114 aa5.42□□□□□ -1.54
HMGN1-205ENST00000419378 OR5H14A6NHG9 310 aa5.42□□□□□ -1.54
HMGN1-205ENST00000419378 G3V4G9 280 aa5.42□□□□□ -1.54
HMGN1-205ENST00000419378 H0YJW9 148 aa5.42□□□□□ -1.54
HMGN1-205ENST00000419378 BET1O15155 118 aa5.42□□□□□ -1.54
HMGN1-205ENST00000419378 NBR2O15453 112 aa5.42□□□□□ -1.54
HMGN1-205ENST00000419378 AIREO43918 545 aa5.42□□□□□ -1.54
HMGN1-205ENST00000419378 SCGNO76038 276 aa5.42□□□□□ -1.54
HMGN1-205ENST00000419378 DIRAS3O95661 229 aa5.42□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms