RNA–Protein interactions for RNA: ENST00000417508.1

VPS16-204, Transcript of VPS16, CORVET/HOPS core subunit, humanhuman

TSL 5

Gene VPS16, Length 819 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS16-204ENST00000417508 ELOVL1Q9BW60 279 aa14.2□□□□□ -0.14
VPS16-204ENST00000417508 ATG5Q9H1Y0 275 aa14.2□□□□□ -0.14
VPS16-204ENST00000417508 ZNF230Q9UIE0 474 aaPredicted RBP14.2□□□□□ -0.14
VPS16-204ENST00000417508 C13orf42A0A1B0GVH6 325 aa14.19□□□□□ -0.14
VPS16-204ENST00000417508 NOTOA8MTQ0 251 aa14.19□□□□□ -0.14
VPS16-204ENST00000417508 SCGNO76038 276 aa14.19□□□□□ -0.14
VPS16-204ENST00000417508 ZP3P21754 424 aa14.19□□□□□ -0.14
VPS16-204ENST00000417508 CDNFQ49AH0 187 aa14.19□□□□□ -0.14
VPS16-204ENST00000417508 TEX45Q8NA69 505 aa14.19□□□□□ -0.14
VPS16-204ENST00000417508 BVESQ8NE79 360 aa14.19□□□□□ -0.14
VPS16-204ENST00000417508 OR5T1Q8NG75 326 aa14.19□□□□□ -0.14
VPS16-204ENST00000417508 DCSTAMPQ9H295 470 aa14.19□□□□□ -0.14
VPS16-204ENST00000417508 Q9H521 79 aa14.19□□□□□ -0.14
VPS16-204ENST00000417508 SLC22A5O76082 557 aa14.18□□□□□ -0.14
VPS16-204ENST00000417508 DUTP33316 252 aaKnown RBP14.18□□□□□ -0.14
VPS16-204ENST00000417508 PJVKQ0ZLH3 352 aa14.18□□□□□ -0.14
VPS16-204ENST00000417508 VMA21Q3ZAQ7 101 aa14.18□□□□□ -0.14
VPS16-204ENST00000417508 NR2C2APQ86WQ0 139 aa14.18□□□□□ -0.14
VPS16-204ENST00000417508 SPARTQ8N0X7 666 aa14.18□□□□□ -0.14
VPS16-204ENST00000417508 OSR1Q8TAX0 266 aaPredicted RBP14.18□□□□□ -0.14
VPS16-204ENST00000417508 MAFIPQ8WZ33 124 aa14.18□□□□□ -0.14
VPS16-204ENST00000417508 DDB2Q92466 427 aa14.18□□□□□ -0.14
VPS16-204ENST00000417508 DNAH9Q9NYC9 4486 aa14.17□□□□□ -0.14
VPS16-204ENST00000417508 NBEAL2Q6ZNJ1 2754 aa14.17□□□□□ -0.14
VPS16-204ENST00000417508 A0A0B4J203 849 aa14.17□□□□□ -0.14
VPS16-204ENST00000417508 SRRM4A7MD48 611 aaKnown RBP14.17□□□□□ -0.14
VPS16-204ENST00000417508 SNRPBP14678 240 aaKnown RBP14.17□□□□□ -0.14
VPS16-204ENST00000417508 GP9P14770 177 aa14.17□□□□□ -0.14
VPS16-204ENST00000417508 SPNP16150 400 aa14.17□□□□□ -0.14
VPS16-204ENST00000417508 AADACP22760 399 aa14.17□□□□□ -0.14
VPS16-204ENST00000417508 UBE2KP61086 200 aa14.17□□□□□ -0.14
VPS16-204ENST00000417508 SSBP2P81877 361 aaPredicted RBP14.17□□□□□ -0.14
VPS16-204ENST00000417508 HACD4Q5VWC8 232 aa14.17□□□□□ -0.14
VPS16-204ENST00000417508 USMG5Q96IX5 58 aa14.17□□□□□ -0.14
VPS16-204ENST00000417508 TXNL4BQ9NX01 149 aaKnown RBP14.17□□□□□ -0.14
VPS16-204ENST00000417508 STUB1Q9UNE7 303 aa14.17□□□□□ -0.14
VPS16-204ENST00000417508 SSR3Q9UNL2 185 aa14.17□□□□□ -0.14
VPS16-204ENST00000417508 STAB2Q8WWQ8 2551 aa14.17□□□□□ -0.14
VPS16-204ENST00000417508 PSMB9P28065 219 aa14.16□□□□□ -0.14
VPS16-204ENST00000417508 C5orf30Q96GV9 206 aa14.16□□□□□ -0.14
VPS16-204ENST00000417508 ASCL2Q99929 193 aa14.16□□□□□ -0.14
VPS16-204ENST00000417508 ST6GALNAC5Q9BVH7 336 aa14.16□□□□□ -0.14
VPS16-204ENST00000417508 TINAGL1Q9GZM7 467 aaPredicted RBP14.16□□□□□ -0.14
VPS16-204ENST00000417508 OR2W1Q9Y3N9 320 aa14.16□□□□□ -0.14
VPS16-204ENST00000417508 CREBL2O60519 120 aaPredicted RBP14.15□□□□□ -0.14
VPS16-204ENST00000417508 PRSS8Q16651 343 aa14.15□□□□□ -0.14
VPS16-204ENST00000417508 CNIH2Q6PI25 160 aa14.15□□□□□ -0.14
VPS16-204ENST00000417508 ZNF645Q8N7E2 425 aa14.15□□□□□ -0.14
VPS16-204ENST00000417508 IGKV1D-8A0A087WSZ0 117 aa14.14□□□□□ -0.15
VPS16-204ENST00000417508 MSGN1A6NI15 193 aa14.14□□□□□ -0.15
VPS16-204ENST00000417508 LINC00473A8K010 186 aa14.14□□□□□ -0.15
VPS16-204ENST00000417508 ATP6V1G2O95670 118 aa14.14□□□□□ -0.15
VPS16-204ENST00000417508 CRYZL1O95825 349 aa14.14□□□□□ -0.15
VPS16-204ENST00000417508 HLA-DQB1P01920 261 aa14.14□□□□□ -0.15
VPS16-204ENST00000417508 SCAND1P57086 179 aa14.14□□□□□ -0.15
VPS16-204ENST00000417508 KLF5Q13887 457 aaPredicted RBP14.14□□□□□ -0.15
VPS16-204ENST00000417508 TATDN3Q17R31 274 aa14.14□□□□□ -0.15
VPS16-204ENST00000417508 PHB2Q99623 299 aa14.14□□□□□ -0.15
VPS16-204ENST00000417508 ELF5Q9UKW6 265 aaPredicted RBP14.14□□□□□ -0.15
VPS16-204ENST00000417508 PRELID3BQ9Y3B1 194 aa14.14□□□□□ -0.15
VPS16-204ENST00000417508 IGLV1-51P01701 117 aa14.13□□□□□ -0.15
VPS16-204ENST00000417508 MRGPRG-AS1Q2M3A8 158 aa14.13□□□□□ -0.15
VPS16-204ENST00000417508 ZNF343Q6P1L6 599 aa14.13□□□□□ -0.15
VPS16-204ENST00000417508 ANKRD13BQ86YJ7 626 aa14.13□□□□□ -0.15
VPS16-204ENST00000417508 COA4Q9NYJ1 87 aa14.13□□□□□ -0.15
VPS16-204ENST00000417508 PEF1Q9UBV8 284 aaKnown RBP14.13□□□□□ -0.15
VPS16-204ENST00000417508 DAPK2Q9UIK4 370 aa14.13□□□□□ -0.15
VPS16-204ENST00000417508 RRP15Q9Y3B9 282 aaKnown RBP14.13□□□□□ -0.15
VPS16-204ENST00000417508 C3orf84H3BNL1 204 aa14.12□□□□□ -0.15
VPS16-204ENST00000417508 ACTL6BO94805 426 aa14.12□□□□□ -0.15
VPS16-204ENST00000417508 OR9G9P0C7N8 305 aa14.12□□□□□ -0.15
VPS16-204ENST00000417508 CD36P16671 472 aa14.12□□□□□ -0.15
VPS16-204ENST00000417508 GNG2P59768 71 aa14.12□□□□□ -0.15
VPS16-204ENST00000417508 TNXAQ16473 311 aa14.12□□□□□ -0.15
VPS16-204ENST00000417508 SFXN4Q6P4A7 337 aa14.12□□□□□ -0.15
VPS16-204ENST00000417508 MMD2Q8IY49 270 aa14.12□□□□□ -0.15
VPS16-204ENST00000417508 MRPS7Q9Y2R9 242 aaKnown RBP14.12□□□□□ -0.15
VPS16-204ENST00000417508 RBMX2Q9Y388 322 aaKnown RBP14.12□□□□□ -0.15
VPS16-204ENST00000417508 SMIM30A4D0T7 59 aa14.11□□□□□ -0.15
VPS16-204ENST00000417508 ANKRD34BA5PLL1 514 aa14.11□□□□□ -0.15
VPS16-204ENST00000417508 CDK10Q15131 360 aa14.11□□□□□ -0.15
VPS16-204ENST00000417508 SBSPONQ8IVN8 264 aa14.11□□□□□ -0.15
VPS16-204ENST00000417508 ADAD2Q8NCV1 583 aaKnown RBP14.11□□□□□ -0.15
VPS16-204ENST00000417508 SRSF12Q8WXF0 261 aaKnown RBP14.11□□□□□ -0.15
VPS16-204ENST00000417508 SNAPC3Q92966 411 aa14.11□□□□□ -0.15
VPS16-204ENST00000417508 HSD17B10Q99714 261 aaKnown RBP14.11□□□□□ -0.15
VPS16-204ENST00000417508 SPIN2AQ99865 258 aa14.11□□□□□ -0.15
VPS16-204ENST00000417508 SPIN2BQ9BPZ2 258 aa14.11□□□□□ -0.15
VPS16-204ENST00000417508 DCUN1D5Q9BTE7 237 aa14.11□□□□□ -0.15
VPS16-204ENST00000417508 ANXA10Q9UJ72 324 aa14.11□□□□□ -0.15
VPS16-204ENST00000417508 TMEM235A6NFC5 223 aa14.1□□□□□ -0.15
VPS16-204ENST00000417508 H0Y980 276 aa14.1□□□□□ -0.15
VPS16-204ENST00000417508 MPPED1O15442 326 aa14.1□□□□□ -0.15
VPS16-204ENST00000417508 FCGR3BO75015 233 aa14.1□□□□□ -0.15
VPS16-204ENST00000417508 TMEM127O75204 238 aa14.1□□□□□ -0.15
VPS16-204ENST00000417508 FRMD6-AS1P0C7T7 363 aa14.1□□□□□ -0.15
VPS16-204ENST00000417508 NFYAP23511 347 aaPredicted RBP14.1□□□□□ -0.15
VPS16-204ENST00000417508 SDC2P34741 201 aa14.1□□□□□ -0.15
VPS16-204ENST00000417508 FAM209BQ5JX69 171 aa14.1□□□□□ -0.15
VPS16-204ENST00000417508 ZNF773Q6PK81 442 aa14.1□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms