RNA–Protein interactions for RNA: ENST00000409530.5

SHANK2-204, Transcript of SH3 and multiple ankyrin repeat domains 2, humanhuman

TSL 5 BASIC

Gene SHANK2, Length 2,123 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK2-204ENST00000409530 TMEM186Q96B77 213 aa12.69□□□□□ -0.38
SHANK2-204ENST00000409530 TMEM56Q96MV1 263 aa12.69□□□□□ -0.38
SHANK2-204ENST00000409530 AMMECR1Q9Y4X0 333 aaPredicted RBP12.69□□□□□ -0.38
SHANK2-204ENST00000409530 TMEM56-RWDD3S4R434 201 aa12.69□□□□□ -0.38
SHANK2-204ENST00000409530 A0A0B4J2A0 478 aa12.68□□□□□ -0.38
SHANK2-204ENST00000409530 IGKV1-5P01602 117 aa12.68□□□□□ -0.38
SHANK2-204ENST00000409530 GIPP09681 153 aaPredicted RBP12.68□□□□□ -0.38
SHANK2-204ENST00000409530 HTR1DP28221 377 aa12.68□□□□□ -0.38
SHANK2-204ENST00000409530 TMEM249Q2WGJ8 235 aa12.68□□□□□ -0.38
SHANK2-204ENST00000409530 LINC01356Q8N9X3 169 aa12.68□□□□□ -0.38
SHANK2-204ENST00000409530 BEND2Q8NDZ0 799 aa12.68□□□□□ -0.38
SHANK2-204ENST00000409530 RRNAD1Q96FB5 475 aaKnown RBP12.68□□□□□ -0.38
SHANK2-204ENST00000409530 SHPKQ9UHJ6 478 aa12.68□□□□□ -0.38
SHANK2-204ENST00000409530 AUP1Q9Y679 476 aa12.68□□□□□ -0.38
SHANK2-204ENST00000409530 APOA2P02652 100 aa12.68□□□□□ -0.38
SHANK2-204ENST00000409530 MSMO1Q15800 293 aa12.68□□□□□ -0.38
SHANK2-204ENST00000409530 PPP1R1CQ8WVI7 109 aa12.68□□□□□ -0.38
SHANK2-204ENST00000409530 DDB2Q92466 427 aa12.68□□□□□ -0.38
SHANK2-204ENST00000409530 ST6GALNAC6Q969X2 333 aa12.68□□□□□ -0.38
SHANK2-204ENST00000409530 R3HDM4Q96D70 268 aa12.68□□□□□ -0.38
SHANK2-204ENST00000409530 NABP2Q9BQ15 211 aa12.68□□□□□ -0.38
SHANK2-204ENST00000409530 NSG2Q9Y328 171 aa12.68□□□□□ -0.38
SHANK2-204ENST00000409530 NOTCH2Q04721 2471 aa12.67□□□□□ -0.38
SHANK2-204ENST00000409530 FXYD6-FXYD2A0A087WZ82 144 aa12.67□□□□□ -0.38
SHANK2-204ENST00000409530 MARCH11A6NNE9 402 aa12.67□□□□□ -0.38
SHANK2-204ENST00000409530 RBMXL2O75526 392 aaKnown RBP12.67□□□□□ -0.38
SHANK2-204ENST00000409530 LOXL1Q08397 574 aaPredicted RBP12.67□□□□□ -0.38
SHANK2-204ENST00000409530 THOC7Q6I9Y2 204 aaKnown RBP12.67□□□□□ -0.38
SHANK2-204ENST00000409530 LRTM2Q8N967 370 aa12.67□□□□□ -0.38
SHANK2-204ENST00000409530 C8orf31Q8N9H6 132 aa12.67□□□□□ -0.38
SHANK2-204ENST00000409530 OR11H6Q8NGC7 330 aa12.67□□□□□ -0.38
SHANK2-204ENST00000409530 OR4S2Q8NH73 311 aa12.67□□□□□ -0.38
SHANK2-204ENST00000409530 FAM216AQ8WUB2 273 aa12.67□□□□□ -0.38
SHANK2-204ENST00000409530 LSM5Q9Y4Y9 91 aaKnown RBP12.67□□□□□ -0.38
SHANK2-204ENST00000409530 IGHV1-3A0A0C4DH29 117 aa12.67□□□□□ -0.38
SHANK2-204ENST00000409530 ODF3BA8MYP8 253 aa12.67□□□□□ -0.38
SHANK2-204ENST00000409530 KCNAB3O43448 404 aa12.67□□□□□ -0.38
SHANK2-204ENST00000409530 IGHV4-31P0DP07 118 aa12.67□□□□□ -0.38
SHANK2-204ENST00000409530 IGHV4-38-2P0DP08 117 aa12.67□□□□□ -0.38
SHANK2-204ENST00000409530 SAA4P35542 130 aa12.67□□□□□ -0.38
SHANK2-204ENST00000409530 OR2B8PP59922 312 aa12.67□□□□□ -0.38
SHANK2-204ENST00000409530 RTL8BQ17RB0 113 aa12.67□□□□□ -0.38
SHANK2-204ENST00000409530 TCTE3Q8IZS6 198 aa12.67□□□□□ -0.38
SHANK2-204ENST00000409530 DYNAPQ8N1N2 210 aa12.67□□□□□ -0.38
SHANK2-204ENST00000409530 COMMD9Q9P000 198 aa12.67□□□□□ -0.38
SHANK2-204ENST00000409530 CACNG5Q9UF02 275 aa12.67□□□□□ -0.38
SHANK2-204ENST00000409530 POLR3KQ9Y2Y1 108 aaPredicted RBP12.67□□□□□ -0.38
SHANK2-204ENST00000409530 H0YJW9 148 aa12.66□□□□□ -0.38
SHANK2-204ENST00000409530 VDAC1P21796 283 aa12.66□□□□□ -0.38
SHANK2-204ENST00000409530 RAP2BP61225 183 aa12.66□□□□□ -0.38
SHANK2-204ENST00000409530 PAX8Q06710 450 aa12.66□□□□□ -0.38
SHANK2-204ENST00000409530 TPTE2P1Q5T6R2 138 aa12.66□□□□□ -0.38
SHANK2-204ENST00000409530 C1orf122Q6ZSJ8 110 aa12.66□□□□□ -0.38
SHANK2-204ENST00000409530 GPR146Q96CH1 333 aa12.66□□□□□ -0.38
SHANK2-204ENST00000409530 MAGT1Q9H0U3 335 aa12.66□□□□□ -0.38
SHANK2-204ENST00000409530 DPM3Q9P2X0 92 aa12.66□□□□□ -0.38
SHANK2-204ENST00000409530 TMED3Q9Y3Q3 217 aa12.66□□□□□ -0.38
SHANK2-204ENST00000409530 TEX15Q9BXT5 2789 aa12.66□□□□□ -0.38
SHANK2-204ENST00000409530 CENPVL3A0A0U1RRI6 287 aa12.65□□□□□ -0.38
SHANK2-204ENST00000409530 LEUTXA8MZ59 168 aa12.65□□□□□ -0.38
SHANK2-204ENST00000409530 TIMM23O14925 209 aa12.65□□□□□ -0.38
SHANK2-204ENST00000409530 SHOXO15266 292 aa12.65□□□□□ -0.38
SHANK2-204ENST00000409530 OR2A4O95047 310 aa12.65□□□□□ -0.38
SHANK2-204ENST00000409530 AVPP01185 164 aa12.65□□□□□ -0.38
SHANK2-204ENST00000409530 RAB32Q13637 225 aa12.65□□□□□ -0.38
SHANK2-204ENST00000409530 HNF4GQ14541 408 aa12.65□□□□□ -0.38
SHANK2-204ENST00000409530 SPINK9Q5DT21 86 aa12.65□□□□□ -0.38
SHANK2-204ENST00000409530 NOXA1Q86UR1 476 aa12.65□□□□□ -0.38
SHANK2-204ENST00000409530 OR1S1Q8NH92 325 aa12.65□□□□□ -0.38
SHANK2-204ENST00000409530 ADTRPQ96IZ2 230 aa12.65□□□□□ -0.38
SHANK2-204ENST00000409530 C2orf50Q96LR7 162 aa12.65□□□□□ -0.38
SHANK2-204ENST00000409530 HARBI1Q96MB7 349 aa12.65□□□□□ -0.38
SHANK2-204ENST00000409530 OR2A7Q96R45 310 aa12.65□□□□□ -0.38
SHANK2-204ENST00000409530 ARPC5LQ9BPX5 153 aa12.65□□□□□ -0.38
SHANK2-204ENST00000409530 GAB2Q9UQC2 676 aa12.65□□□□□ -0.38
SHANK2-204ENST00000409530 SOX21Q9Y651 276 aaPredicted RBP12.65□□□□□ -0.38
SHANK2-204ENST00000409530 ANKRD34BA5PLL1 514 aa12.65□□□□□ -0.38
SHANK2-204ENST00000409530 G3V3Q6 166 aa12.65□□□□□ -0.38
SHANK2-204ENST00000409530 B3GALNT1O75752 331 aa12.65□□□□□ -0.38
SHANK2-204ENST00000409530 HPRT1P00492 218 aa12.65□□□□□ -0.38
SHANK2-204ENST00000409530 GAPDHP04406 335 aaKnown RBP12.65□□□□□ -0.38
SHANK2-204ENST00000409530 ERVK-16P61578 105 aa12.65□□□□□ -0.38
SHANK2-204ENST00000409530 NMSQ5H8A3 153 aa12.65□□□□□ -0.38
SHANK2-204ENST00000409530 PRSS57Q6UWY2 283 aa12.65□□□□□ -0.38
SHANK2-204ENST00000409530 Q6ZRM9 215 aa12.65□□□□□ -0.38
SHANK2-204ENST00000409530 H2BFWTQ7Z2G1 175 aa12.65□□□□□ -0.38
SHANK2-204ENST00000409530 PIP4P2Q8N4L2 257 aa12.65□□□□□ -0.38
SHANK2-204ENST00000409530 OR11H4Q8NGC9 324 aa12.65□□□□□ -0.38
SHANK2-204ENST00000409530 C22orf15Q8WYQ4 148 aa12.65□□□□□ -0.38
SHANK2-204ENST00000409530 TRAV20A0A0B4J274 112 aa12.64□□□□□ -0.39
SHANK2-204ENST00000409530 A0A1W2PPI3 338 aa12.64□□□□□ -0.39
SHANK2-204ENST00000409530 CEACAM3P40198 252 aa12.64□□□□□ -0.39
SHANK2-204ENST00000409530 KIR2DS2P43631 304 aa12.64□□□□□ -0.39
SHANK2-204ENST00000409530 RAB13P51153 203 aa12.64□□□□□ -0.39
SHANK2-204ENST00000409530 ZNF137PP52743 207 aa12.64□□□□□ -0.39
SHANK2-204ENST00000409530 HES1Q14469 280 aa12.64□□□□□ -0.39
SHANK2-204ENST00000409530 CD300LFQ8TDQ1 290 aa12.64□□□□□ -0.39
SHANK2-204ENST00000409530 IL22RA2Q969J5 263 aa12.64□□□□□ -0.39
SHANK2-204ENST00000409530 RITA1Q96K30 269 aa12.64□□□□□ -0.39
SHANK2-204ENST00000409530 SLA2Q9H6Q3 261 aa12.64□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 55.2 ms