RNA–Protein interactions for RNA: ENST00000402555.2

HMGB1P20-201, Transcript of high mobility group box 1 pseudogene 20, humanhuman

BASIC

Gene HMGB1P20, Length 677 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P20-201ENST00000402555 SORL1Q92673 2214 aa4.48□□□□□ -1.69
HMGB1P20-201ENST00000402555 STAB2Q8WWQ8 2551 aa4.48□□□□□ -1.69
HMGB1P20-201ENST00000402555 A0A087WXM4 84 aa4.48□□□□□ -1.69
HMGB1P20-201ENST00000402555 IGKV1D-13A0A0B4J2D9 117 aa4.48□□□□□ -1.69
HMGB1P20-201ENST00000402555 MEIS3P1A6NDR6 274 aa4.48□□□□□ -1.69
HMGB1P20-201ENST00000402555 SRRM4A7MD48 611 aaKnown RBP4.48□□□□□ -1.69
HMGB1P20-201ENST00000402555 LINC00473A8K010 186 aa4.48□□□□□ -1.69
HMGB1P20-201ENST00000402555 ARPC1BO15143 372 aaKnown RBP4.48□□□□□ -1.69
HMGB1P20-201ENST00000402555 AIREO43918 545 aa4.48□□□□□ -1.69
HMGB1P20-201ENST00000402555 IGLV2-23P01705 113 aa4.48□□□□□ -1.69
HMGB1P20-201ENST00000402555 IGHV3-11P01762 117 aa4.48□□□□□ -1.69
HMGB1P20-201ENST00000402555 OR5H8P0DN80 308 aa4.48□□□□□ -1.69
HMGB1P20-201ENST00000402555 IGKV1-13P0DP09 117 aa4.48□□□□□ -1.69
HMGB1P20-201ENST00000402555 DTYMKP23919 212 aa4.48□□□□□ -1.69
HMGB1P20-201ENST00000402555 DUTP33316 252 aaKnown RBP4.48□□□□□ -1.69
HMGB1P20-201ENST00000402555 CDX1P47902 265 aaPredicted RBP4.48□□□□□ -1.69
HMGB1P20-201ENST00000402555 RAB9AP51151 201 aa4.48□□□□□ -1.69
HMGB1P20-201ENST00000402555 LUMP51884 338 aaPredicted RBP4.48□□□□□ -1.69
HMGB1P20-201ENST00000402555 GNG2P59768 71 aa4.48□□□□□ -1.69
HMGB1P20-201ENST00000402555 GNB1P62873 340 aa4.48□□□□□ -1.69
HMGB1P20-201ENST00000402555 SSBP2P81877 361 aaPredicted RBP4.48□□□□□ -1.69
HMGB1P20-201ENST00000402555 PJVKQ0ZLH3 352 aa4.48□□□□□ -1.69
HMGB1P20-201ENST00000402555 KRTAP19-4Q3LI73 84 aa4.48□□□□□ -1.69
HMGB1P20-201ENST00000402555 OR2B11Q5JQS5 317 aa4.48□□□□□ -1.69
HMGB1P20-201ENST00000402555 ASPHD1Q5U4P2 390 aa4.48□□□□□ -1.69
HMGB1P20-201ENST00000402555 ZNF660Q6AZW8 331 aaPredicted RBP4.48□□□□□ -1.69
HMGB1P20-201ENST00000402555 UNQ5815/PRO19632Q6UWF5 114 aa4.48□□□□□ -1.69
HMGB1P20-201ENST00000402555 Q6ZS49 121 aa4.48□□□□□ -1.69
HMGB1P20-201ENST00000402555 REC114Q7Z4M0 266 aa4.48□□□□□ -1.69
HMGB1P20-201ENST00000402555 PPP1R27Q86WC6 154 aa4.48□□□□□ -1.69
HMGB1P20-201ENST00000402555 PDPNQ86YL7 162 aa4.48□□□□□ -1.69
HMGB1P20-201ENST00000402555 MFSD4AQ8N468 514 aa4.48□□□□□ -1.69
HMGB1P20-201ENST00000402555 GVQW1Q8N7I0 195 aa4.48□□□□□ -1.69
HMGB1P20-201ENST00000402555 ZNF491Q8N8L2 437 aa4.48□□□□□ -1.69
HMGB1P20-201ENST00000402555 MINDY2Q8NBR6 621 aa4.48□□□□□ -1.69
HMGB1P20-201ENST00000402555 LFNGQ8NES3 379 aa4.48□□□□□ -1.69
HMGB1P20-201ENST00000402555 OR11H1Q8NG94 326 aa4.48□□□□□ -1.69
HMGB1P20-201ENST00000402555 GRPEL2Q8TAA5 225 aa4.48□□□□□ -1.69
HMGB1P20-201ENST00000402555 MYOZ3Q8TDC0 251 aa4.48□□□□□ -1.69
HMGB1P20-201ENST00000402555 C4orf3Q8WVX3 66 aa4.48□□□□□ -1.69
HMGB1P20-201ENST00000402555 ARPC1AQ92747 370 aa4.48□□□□□ -1.69
HMGB1P20-201ENST00000402555 FLYWCH2Q96CP2 140 aaKnown RBP4.48□□□□□ -1.69
HMGB1P20-201ENST00000402555 HARBI1Q96MB7 349 aa4.48□□□□□ -1.69
HMGB1P20-201ENST00000402555 MS4A10Q96PG2 267 aa4.48□□□□□ -1.69
HMGB1P20-201ENST00000402555 TSNAXQ99598 290 aaKnown RBP4.48□□□□□ -1.69
HMGB1P20-201ENST00000402555 GHITMQ9H3K2 345 aa4.48□□□□□ -1.69
HMGB1P20-201ENST00000402555 ZNF580Q9UK33 172 aa4.48□□□□□ -1.69
HMGB1P20-201ENST00000402555 NUBP2Q9Y5Y2 271 aa4.48□□□□□ -1.69
HMGB1P20-201ENST00000402555 TENM3Q9P273 2699 aa4.47□□□□□ -1.69
HMGB1P20-201ENST00000402555 I3L521 148 aa4.47□□□□□ -1.69
HMGB1P20-201ENST00000402555 SHOXO15266 292 aa4.47□□□□□ -1.69
HMGB1P20-201ENST00000402555 TUSC2O75896 110 aa4.47□□□□□ -1.69
HMGB1P20-201ENST00000402555 SPDEFO95238 335 aa4.47□□□□□ -1.69
HMGB1P20-201ENST00000402555 TNFAIP8O95379 198 aa4.47□□□□□ -1.69
HMGB1P20-201ENST00000402555 CNIH1O95406 144 aa4.47□□□□□ -1.69
HMGB1P20-201ENST00000402555 DUS4LO95620 317 aaKnown RBP4.47□□□□□ -1.69
HMGB1P20-201ENST00000402555 DIRAS3O95661 229 aa4.47□□□□□ -1.69
HMGB1P20-201ENST00000402555 CRYZL1O95825 349 aa4.47□□□□□ -1.69
HMGB1P20-201ENST00000402555 CRYGBP07316 175 aa4.47□□□□□ -1.69
HMGB1P20-201ENST00000402555 APELAP0DMC3 54 aa4.47□□□□□ -1.69
HMGB1P20-201ENST00000402555 SLC6A1P30531 599 aa4.47□□□□□ -1.69
HMGB1P20-201ENST00000402555 RPS19P39019 145 aaKnown RBP4.47□□□□□ -1.69
HMGB1P20-201ENST00000402555 CRIP2P52943 208 aaPredicted RBP4.47□□□□□ -1.69
HMGB1P20-201ENST00000402555 RPL30P62888 115 aaKnown RBP4.47□□□□□ -1.69
HMGB1P20-201ENST00000402555 PITPNAQ00169 270 aa4.47□□□□□ -1.69
HMGB1P20-201ENST00000402555 DEFA5Q01523 94 aa4.47□□□□□ -1.69
HMGB1P20-201ENST00000402555 EGFEM1PQ0D2K5 195 aa4.47□□□□□ -1.69
HMGB1P20-201ENST00000402555 FHL3Q13643 280 aa4.47□□□□□ -1.69
HMGB1P20-201ENST00000402555 FXYD3Q14802 87 aa4.47□□□□□ -1.69
HMGB1P20-201ENST00000402555 ARL6IP1Q15041 203 aa4.47□□□□□ -1.69
HMGB1P20-201ENST00000402555 SRSF7Q16629 238 aaKnown RBP eCLIP4.47□□□□□ -1.69
HMGB1P20-201ENST00000402555 MLANAQ16655 118 aa4.47□□□□□ -1.69
HMGB1P20-201ENST00000402555 MRGPRG-AS1Q2M3A8 158 aa4.47□□□□□ -1.69
HMGB1P20-201ENST00000402555 TMEM177Q53S58 311 aa4.47□□□□□ -1.69
HMGB1P20-201ENST00000402555 ACTBL2Q562R1 376 aa4.47□□□□□ -1.69
HMGB1P20-201ENST00000402555 CNIH2Q6PI25 160 aa4.47□□□□□ -1.69
HMGB1P20-201ENST00000402555 IDO2Q6ZQW0 420 aa4.47□□□□□ -1.69
HMGB1P20-201ENST00000402555 BEST4Q8NFU0 473 aa4.47□□□□□ -1.69
HMGB1P20-201ENST00000402555 OR5T1Q8NG75 326 aa4.47□□□□□ -1.69
HMGB1P20-201ENST00000402555 OR1N2Q8NGR9 330 aa4.47□□□□□ -1.69
HMGB1P20-201ENST00000402555 DDB2Q92466 427 aa4.47□□□□□ -1.69
HMGB1P20-201ENST00000402555 GPHA2Q96T91 129 aa4.47□□□□□ -1.69
HMGB1P20-201ENST00000402555 RNF5Q99942 180 aa4.47□□□□□ -1.69
HMGB1P20-201ENST00000402555 DCSTAMPQ9H295 470 aa4.47□□□□□ -1.69
HMGB1P20-201ENST00000402555 AUNIPQ9H7T9 357 aa4.47□□□□□ -1.69
HMGB1P20-201ENST00000402555 VCX3AQ9NNX9 186 aa4.47□□□□□ -1.69
HMGB1P20-201ENST00000402555 ANXA10Q9UJ72 324 aa4.47□□□□□ -1.69
HMGB1P20-201ENST00000402555 SPATA2Q9UM82 520 aa4.47□□□□□ -1.69
HMGB1P20-201ENST00000402555 FOXA2Q9Y261 457 aaPredicted RBP4.47□□□□□ -1.69
HMGB1P20-201ENST00000402555 VSIG4Q9Y279 399 aa4.47□□□□□ -1.69
HMGB1P20-201ENST00000402555 OR2W1Q9Y3N9 320 aa4.47□□□□□ -1.69
HMGB1P20-201ENST00000402555 ETV7Q9Y603 341 aa4.47□□□□□ -1.69
HMGB1P20-201ENST00000402555 IGHV4OR15-8A0A075B7B6 117 aa4.46□□□□□ -1.7
HMGB1P20-201ENST00000402555 A0A087WW49 117 aa4.46□□□□□ -1.7
HMGB1P20-201ENST00000402555 TRIM64CA6NLI5 447 aa4.46□□□□□ -1.7
HMGB1P20-201ENST00000402555 SEC14L6B5MCN3 397 aa4.46□□□□□ -1.7
HMGB1P20-201ENST00000402555 TNFSF12O43508 249 aa4.46□□□□□ -1.7
HMGB1P20-201ENST00000402555 FCGR3BO75015 233 aa4.46□□□□□ -1.7
HMGB1P20-201ENST00000402555 SCGNO76038 276 aa4.46□□□□□ -1.7
HMGB1P20-201ENST00000402555 IGLV2-14P01704 120 aa4.46□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms