RNA–Protein interactions for RNA: ENST00000401522.7

CHRFAM7A-203, Transcript of CHRNA7 (exons 5-10) and FAM7A (exons A-E) fusion, humanhuman

TSL 1 (best) BASIC

Gene CHRFAM7A, Length 1,913 nt, Biotype protein coding, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRFAM7A-203ENST00000401522 ZNF665Q9H7R5 613 aa13.27□□□□□ -0.29
CHRFAM7A-203ENST00000401522 HSPB7Q9UBY9 170 aa13.27□□□□□ -0.29
CHRFAM7A-203ENST00000401522 TENM4Q6N022 2769 aa13.27□□□□□ -0.29
CHRFAM7A-203ENST00000401522 OOEPA6NGQ2 149 aa13.26□□□□□ -0.29
CHRFAM7A-203ENST00000401522 ZFP92A6NM28 416 aa13.26□□□□□ -0.29
CHRFAM7A-203ENST00000401522 CLN5O75503 358 aa13.26□□□□□ -0.29
CHRFAM7A-203ENST00000401522 OR1L1Q8NH94 360 aa13.26□□□□□ -0.29
CHRFAM7A-203ENST00000401522 TAF15Q92804 592 aaKnown RBP eCLIP13.26□□□□□ -0.29
CHRFAM7A-203ENST00000401522 RBKSQ9H477 322 aa13.26□□□□□ -0.29
CHRFAM7A-203ENST00000401522 VSIRQ9H7M9 311 aa13.26□□□□□ -0.29
CHRFAM7A-203ENST00000401522 TMEM242Q9NWH2 141 aa13.26□□□□□ -0.29
CHRFAM7A-203ENST00000401522 VAX2Q9UIW0 290 aa13.26□□□□□ -0.29
CHRFAM7A-203ENST00000401522 HELZ2Q9BYK8 2649 aaKnown RBP13.26□□□□□ -0.29
CHRFAM7A-203ENST00000401522 LRRK2Q5S007 2527 aa13.25□□□□□ -0.29
CHRFAM7A-203ENST00000401522 C12orf77C9JDV5 145 aa13.25□□□□□ -0.29
CHRFAM7A-203ENST00000401522 CLDN1O95832 211 aa13.25□□□□□ -0.29
CHRFAM7A-203ENST00000401522 P0C879 139 aa13.25□□□□□ -0.29
CHRFAM7A-203ENST00000401522 IL2RGP31785 369 aa13.25□□□□□ -0.29
CHRFAM7A-203ENST00000401522 OR3A1P47881 315 aa13.25□□□□□ -0.29
CHRFAM7A-203ENST00000401522 CATR1Q13166 79 aa13.25□□□□□ -0.29
CHRFAM7A-203ENST00000401522 EIF4EBP1Q13541 118 aaPredicted RBP13.25□□□□□ -0.29
CHRFAM7A-203ENST00000401522 ATP6V1FQ16864 119 aa13.25□□□□□ -0.29
CHRFAM7A-203ENST00000401522 ZNF674Q2M3X9 581 aa13.25□□□□□ -0.29
CHRFAM7A-203ENST00000401522 CENPVQ7Z7K6 275 aaPredicted RBP13.25□□□□□ -0.29
CHRFAM7A-203ENST00000401522 TCTEX1D1Q8N7M0 179 aa13.25□□□□□ -0.29
CHRFAM7A-203ENST00000401522 SPOCK3Q9BQ16 436 aa13.25□□□□□ -0.29
CHRFAM7A-203ENST00000401522 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP13.25□□□□□ -0.29
CHRFAM7A-203ENST00000401522 MAP1LC3B2A6NCE7 125 aa13.25□□□□□ -0.29
CHRFAM7A-203ENST00000401522 DEFB108AA8MXU0 73 aa13.25□□□□□ -0.29
CHRFAM7A-203ENST00000401522 PSPNO60542 156 aa13.25□□□□□ -0.29
CHRFAM7A-203ENST00000401522 CXCL1P09341 107 aa13.25□□□□□ -0.29
CHRFAM7A-203ENST00000401522 HOXA5P20719 270 aa13.25□□□□□ -0.29
CHRFAM7A-203ENST00000401522 ZNF343Q6P1L6 599 aa13.25□□□□□ -0.29
CHRFAM7A-203ENST00000401522 C1orf174Q8IYL3 243 aa13.25□□□□□ -0.29
CHRFAM7A-203ENST00000401522 OR13D1Q8NGV5 346 aa13.25□□□□□ -0.29
CHRFAM7A-203ENST00000401522 KLF14Q8TD94 323 aaPredicted RBP13.25□□□□□ -0.29
CHRFAM7A-203ENST00000401522 PLPPR2Q96GM1 343 aa13.25□□□□□ -0.29
CHRFAM7A-203ENST00000401522 MAP1LC3BQ9GZQ8 125 aa13.25□□□□□ -0.29
CHRFAM7A-203ENST00000401522 OR2D2Q9H210 308 aa13.25□□□□□ -0.29
CHRFAM7A-203ENST00000401522 CXXC4Q9H2H0 198 aa13.25□□□□□ -0.29
CHRFAM7A-203ENST00000401522 NIT2Q9NQR4 276 aa13.25□□□□□ -0.29
CHRFAM7A-203ENST00000401522 COL12A1Q99715 3063 aa13.24□□□□□ -0.29
CHRFAM7A-203ENST00000401522 UBE2L5PA0A1B0GUS4 154 aa13.24□□□□□ -0.29
CHRFAM7A-203ENST00000401522 SIAH2O43255 324 aa13.24□□□□□ -0.29
CHRFAM7A-203ENST00000401522 FABP1P07148 127 aa13.24□□□□□ -0.29
CHRFAM7A-203ENST00000401522 TUBG1P23258 451 aa13.24□□□□□ -0.29
CHRFAM7A-203ENST00000401522 MPV17P39210 176 aa13.24□□□□□ -0.29
CHRFAM7A-203ENST00000401522 ERVFRD-1P60508 538 aa13.24□□□□□ -0.29
CHRFAM7A-203ENST00000401522 SSX7Q7RTT5 188 aa13.24□□□□□ -0.29
CHRFAM7A-203ENST00000401522 TUBG2Q9NRH3 451 aa13.24□□□□□ -0.29
CHRFAM7A-203ENST00000401522 CTNNBIP1Q9NSA3 81 aaPredicted RBP13.24□□□□□ -0.29
CHRFAM7A-203ENST00000401522 LRRC30A6NM36 301 aa13.23□□□□□ -0.29
CHRFAM7A-203ENST00000401522 TGOLN2O43493 480 aa13.23□□□□□ -0.29
CHRFAM7A-203ENST00000401522 CYB5R3P00387 301 aaPredicted RBP13.23□□□□□ -0.29
CHRFAM7A-203ENST00000401522 HBZP02008 142 aa13.23□□□□□ -0.29
CHRFAM7A-203ENST00000401522 CEBPDP49716 269 aaPredicted RBP13.23□□□□□ -0.29
CHRFAM7A-203ENST00000401522 FGF8P55075 233 aaPredicted RBP13.23□□□□□ -0.29
CHRFAM7A-203ENST00000401522 NINJ1Q92982 152 aa13.23□□□□□ -0.29
CHRFAM7A-203ENST00000401522 OR51M1Q9H341 326 aa13.23□□□□□ -0.29
CHRFAM7A-203ENST00000401522 HEATR1Q9H583 2144 aaKnown RBP13.23□□□□□ -0.29
CHRFAM7A-203ENST00000401522 TGIF2-C20orf24A0A0A6YYL0 155 aa13.23□□□□□ -0.29
CHRFAM7A-203ENST00000401522 IGHV3-64DA0A0J9YX35 117 aa13.23□□□□□ -0.29
CHRFAM7A-203ENST00000401522 RAMP3O60896 148 aa13.23□□□□□ -0.29
CHRFAM7A-203ENST00000401522 CD3EP07766 207 aa13.23□□□□□ -0.29
CHRFAM7A-203ENST00000401522 LOXP28300 417 aaPredicted RBP13.23□□□□□ -0.29
CHRFAM7A-203ENST00000401522 CDX1P47902 265 aaPredicted RBP13.23□□□□□ -0.29
CHRFAM7A-203ENST00000401522 RND2P52198 227 aa13.23□□□□□ -0.29
CHRFAM7A-203ENST00000401522 ELLP55199 621 aaPredicted RBP13.23□□□□□ -0.29
CHRFAM7A-203ENST00000401522 NKX6-1P78426 367 aaPredicted RBP13.23□□□□□ -0.29
CHRFAM7A-203ENST00000401522 OR8G2PQ6IF36 304 aa13.23□□□□□ -0.29
CHRFAM7A-203ENST00000401522 C11orf53Q8IXP5 236 aa13.23□□□□□ -0.29
CHRFAM7A-203ENST00000401522 C1orf87Q8N0U7 546 aa13.23□□□□□ -0.29
CHRFAM7A-203ENST00000401522 NUP37Q8NFH4 326 aa13.23□□□□□ -0.29
CHRFAM7A-203ENST00000401522 OR52L2PQ8NGH6 319 aa13.23□□□□□ -0.29
CHRFAM7A-203ENST00000401522 C5orf30Q96GV9 206 aa13.23□□□□□ -0.29
CHRFAM7A-203ENST00000401522 TMEM147Q9BVK8 224 aa13.23□□□□□ -0.29
CHRFAM7A-203ENST00000401522 GSN-AS1Q9NRJ2 163 aa13.23□□□□□ -0.29
CHRFAM7A-203ENST00000401522 URGCP-MRPS24S4R325 110 aa13.23□□□□□ -0.29
CHRFAM7A-203ENST00000401522 CEBPZOSA8MTT3 80 aa13.22□□□□□ -0.29
CHRFAM7A-203ENST00000401522 CLDN34H7C241 214 aa13.22□□□□□ -0.29
CHRFAM7A-203ENST00000401522 MLNRO43193 412 aa13.22□□□□□ -0.29
CHRFAM7A-203ENST00000401522 MBP02144 154 aa13.22□□□□□ -0.29
CHRFAM7A-203ENST00000401522 S100PP25815 95 aa13.22□□□□□ -0.29
CHRFAM7A-203ENST00000401522 G6PCP35575 357 aa13.22□□□□□ -0.29
CHRFAM7A-203ENST00000401522 ACP7Q6ZNF0 438 aa13.22□□□□□ -0.29
CHRFAM7A-203ENST00000401522 TMEM204Q9BSN7 226 aa13.22□□□□□ -0.29
CHRFAM7A-203ENST00000401522 MRPL37Q9BZE1 423 aaKnown RBP13.22□□□□□ -0.29
CHRFAM7A-203ENST00000401522 CTDSP1Q9GZU7 261 aa13.22□□□□□ -0.29
CHRFAM7A-203ENST00000401522 SDF2L1Q9HCN8 221 aa13.22□□□□□ -0.29
CHRFAM7A-203ENST00000401522 SLC39A9Q9NUM3 307 aa13.22□□□□□ -0.29
CHRFAM7A-203ENST00000401522 LAMP3Q9UQV4 416 aa13.22□□□□□ -0.29
CHRFAM7A-203ENST00000401522 CADP27708 2225 aa13.22□□□□□ -0.29
CHRFAM7A-203ENST00000401522 IFNL4K9M1U5 179 aa13.21□□□□□ -0.29
CHRFAM7A-203ENST00000401522 WNT9BO14905 357 aa13.21□□□□□ -0.29
CHRFAM7A-203ENST00000401522 RAB29O14966 203 aa13.21□□□□□ -0.29
CHRFAM7A-203ENST00000401522 CYB5BO43169 146 aa13.21□□□□□ -0.29
CHRFAM7A-203ENST00000401522 NDUFS6O75380 124 aaKnown RBP13.21□□□□□ -0.29
CHRFAM7A-203ENST00000401522 KRASP01116 189 aa13.21□□□□□ -0.29
CHRFAM7A-203ENST00000401522 GLRXP35754 106 aa13.21□□□□□ -0.29
CHRFAM7A-203ENST00000401522 RPL30P62888 115 aaKnown RBP13.21□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 47.9 ms