RNA–Protein interactions for RNA: ENST00000399641.5

CACNA1C-217, Transcript of calcium voltage-gated channel subunit alpha1 C, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CACNA1C, Length 6,511 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1C-217ENST00000399641 CISD3P0C7P0 127 aa9.63□□□□□ -0.87
CACNA1C-217ENST00000399641 SMIM19Q96E16 107 aa9.63□□□□□ -0.87
CACNA1C-217ENST00000399641 JPT2Q9H910 190 aa9.63□□□□□ -0.87
CACNA1C-217ENST00000399641 NPVFQ9HCQ7 196 aa9.63□□□□□ -0.87
CACNA1C-217ENST00000399641 ANAPC10Q9UM13 185 aa9.63□□□□□ -0.87
CACNA1C-217ENST00000399641 LSM4Q9Y4Z0 139 aaKnown RBP9.63□□□□□ -0.87
CACNA1C-217ENST00000399641 LAMB4A4D0S4 1761 aa9.63□□□□□ -0.87
CACNA1C-217ENST00000399641 HLA-DRB1P01911 266 aa9.63□□□□□ -0.87
CACNA1C-217ENST00000399641 ZNF488Q96MN9 340 aa9.63□□□□□ -0.87
CACNA1C-217ENST00000399641 NABP2Q9BQ15 211 aa9.63□□□□□ -0.87
CACNA1C-217ENST00000399641 NKX2-6A6NCS4 301 aa9.62□□□□□ -0.87
CACNA1C-217ENST00000399641 FBXW9Q5XUX1 488 aa9.62□□□□□ -0.87
CACNA1C-217ENST00000399641 TEX37Q96LM6 180 aa9.62□□□□□ -0.87
CACNA1C-217ENST00000399641 OR2V2Q96R30 315 aa9.62□□□□□ -0.87
CACNA1C-217ENST00000399641 CCL13Q99616 98 aa9.62□□□□□ -0.87
CACNA1C-217ENST00000399641 A0A1W2PQM1 296 aa9.62□□□□□ -0.87
CACNA1C-217ENST00000399641 TRDCB7Z8K6 153 aa9.62□□□□□ -0.87
CACNA1C-217ENST00000399641 H3BUT2 72 aa9.62□□□□□ -0.87
CACNA1C-217ENST00000399641 ATP5LO75964 103 aa9.62□□□□□ -0.87
CACNA1C-217ENST00000399641 FOLR2P14207 255 aa9.62□□□□□ -0.87
CACNA1C-217ENST00000399641 KLK2P20151 261 aa9.62□□□□□ -0.87
CACNA1C-217ENST00000399641 RPL31P62899 125 aaKnown RBP9.62□□□□□ -0.87
CACNA1C-217ENST00000399641 GTSCR1Q86UQ5 136 aa9.62□□□□□ -0.87
CACNA1C-217ENST00000399641 C7orf69Q9H7B7 122 aa9.62□□□□□ -0.87
CACNA1C-217ENST00000399641 LCN2P80188 198 aa9.62□□□□□ -0.87
CACNA1C-217ENST00000399641 ZNF114Q8NC26 417 aa9.62□□□□□ -0.87
CACNA1C-217ENST00000399641 C8orf46Q8TAG6 207 aa9.62□□□□□ -0.87
CACNA1C-217ENST00000399641 ZPLD1Q8TCW7 415 aa9.62□□□□□ -0.87
CACNA1C-217ENST00000399641 WNT2BQ93097 391 aa9.62□□□□□ -0.87
CACNA1C-217ENST00000399641 CHKB-CPT1BH3BT56 60 aa9.62□□□□□ -0.87
CACNA1C-217ENST00000399641 HPRT1P00492 218 aa9.62□□□□□ -0.87
CACNA1C-217ENST00000399641 SRD5A1P18405 259 aa9.62□□□□□ -0.87
CACNA1C-217ENST00000399641 NUTF2P61970 127 aaKnown RBP9.62□□□□□ -0.87
CACNA1C-217ENST00000399641 ARRDC1Q8N5I2 433 aa9.62□□□□□ -0.87
CACNA1C-217ENST00000399641 ST6GAL2Q96JF0 529 aa9.62□□□□□ -0.87
CACNA1C-217ENST00000399641 CHST5Q9GZS9 411 aa9.62□□□□□ -0.87
CACNA1C-217ENST00000399641 RGPD5Q99666 1765 aa9.62□□□□□ -0.87
CACNA1C-217ENST00000399641 MPC2O95563 127 aa9.62□□□□□ -0.87
CACNA1C-217ENST00000399641 CDK5R1Q15078 307 aa9.61□□□□□ -0.87
CACNA1C-217ENST00000399641 CMC2Q9NRP2 79 aa9.61□□□□□ -0.87
CACNA1C-217ENST00000399641 UQCR10Q9UDW1 63 aa9.61□□□□□ -0.87
CACNA1C-217ENST00000399641 CDC42EP3Q9UKI2 254 aa9.61□□□□□ -0.87
CACNA1C-217ENST00000399641 STARD10Q9Y365 291 aa9.61□□□□□ -0.87
CACNA1C-217ENST00000399641 PITX3O75364 302 aa9.61□□□□□ -0.87
CACNA1C-217ENST00000399641 ESDP10768 282 aa9.61□□□□□ -0.87
CACNA1C-217ENST00000399641 OR11H12B2RN74 326 aa9.61□□□□□ -0.87
CACNA1C-217ENST00000399641 IFNL4K9M1U5 179 aa9.61□□□□□ -0.87
CACNA1C-217ENST00000399641 S1PR2O95136 353 aa9.61□□□□□ -0.87
CACNA1C-217ENST00000399641 OR11H1Q8NG94 326 aa9.61□□□□□ -0.87
CACNA1C-217ENST00000399641 OR11H2Q8NH07 326 aa9.61□□□□□ -0.87
CACNA1C-217ENST00000399641 MZB1Q8WU39 189 aa9.61□□□□□ -0.87
CACNA1C-217ENST00000399641 EWSR1Q01844 656 aaKnown RBP eCLIP9.61□□□□□ -0.87
CACNA1C-217ENST00000399641 UBE2V2Q15819 145 aa9.61□□□□□ -0.87
CACNA1C-217ENST00000399641 VKORC1L1Q8N0U8 176 aa9.61□□□□□ -0.87
CACNA1C-217ENST00000399641 WDFY2Q96P53 400 aa9.61□□□□□ -0.87
CACNA1C-217ENST00000399641 MPC1Q9Y5U8 109 aa9.61□□□□□ -0.87
CACNA1C-217ENST00000399641 SSC5DA1L4H1 1573 aa9.61□□□□□ -0.87
CACNA1C-217ENST00000399641 WDR38Q5JTN6 314 aa9.61□□□□□ -0.87
CACNA1C-217ENST00000399641 TRGC1P0CF51 173 aa9.6□□□□□ -0.87
CACNA1C-217ENST00000399641 ZNF414Q96IQ9 312 aa9.6□□□□□ -0.87
CACNA1C-217ENST00000399641 C7orf77A4D0Y5 90 aa9.6□□□□□ -0.87
CACNA1C-217ENST00000399641 VDAC2P45880 294 aaPredicted RBP9.6□□□□□ -0.87
CACNA1C-217ENST00000399641 KLF9Q13886 244 aaPredicted RBP9.6□□□□□ -0.87
CACNA1C-217ENST00000399641 STHQ8IWL8 128 aa9.6□□□□□ -0.87
CACNA1C-217ENST00000399641 ZBTB34Q8NCN2 500 aa9.6□□□□□ -0.87
CACNA1C-217ENST00000399641 SFXN3Q9BWM7 321 aa9.6□□□□□ -0.87
CACNA1C-217ENST00000399641 KCNE5Q9UJ90 142 aa9.6□□□□□ -0.87
CACNA1C-217ENST00000399641 SYNGR1O43759 233 aa9.6□□□□□ -0.87
CACNA1C-217ENST00000399641 RPS11P62280 158 aaKnown RBP eCLIP9.6□□□□□ -0.87
CACNA1C-217ENST00000399641 PRR31Q5SQ13 230 aa9.6□□□□□ -0.87
CACNA1C-217ENST00000399641 ELOVL5Q9NYP7 299 aa9.6□□□□□ -0.87
CACNA1C-217ENST00000399641 FGF5P12034 268 aa9.6□□□□□ -0.87
CACNA1C-217ENST00000399641 TMEM50BP56557 158 aa9.6□□□□□ -0.87
CACNA1C-217ENST00000399641 GAGE2AQ6NT46 116 aa9.6□□□□□ -0.87
CACNA1C-217ENST00000399641 PP6455Q8WZ26 134 aa9.6□□□□□ -0.87
CACNA1C-217ENST00000399641 MRPL24Q96A35 216 aaKnown RBP9.6□□□□□ -0.87
CACNA1C-217ENST00000399641 VSTM2LQ96N03 204 aa9.6□□□□□ -0.87
CACNA1C-217ENST00000399641 PRNDQ9UKY0 176 aa9.6□□□□□ -0.87
CACNA1C-217ENST00000399641 TRAV24A0A0B4J272 114 aa9.6□□□□□ -0.87
CACNA1C-217ENST00000399641 TCRBV4S1A1TA0A5B7 111 aa9.6□□□□□ -0.87
CACNA1C-217ENST00000399641 CTDSPLO15194 276 aa9.6□□□□□ -0.87
CACNA1C-217ENST00000399641 CD5LO43866 347 aa9.6□□□□□ -0.87
CACNA1C-217ENST00000399641 LINC00869P0C866 280 aa9.6□□□□□ -0.87
CACNA1C-217ENST00000399641 FOXA3P55318 350 aaPredicted RBP9.6□□□□□ -0.87
CACNA1C-217ENST00000399641 P2RY6Q15077 328 aa9.6□□□□□ -0.87
CACNA1C-217ENST00000399641 ZNF385AQ96PM9 386 aaKnown RBP9.6□□□□□ -0.87
CACNA1C-217ENST00000399641 TRAV8-1A0A0A6YYK1 113 aa9.59□□□□□ -0.87
CACNA1C-217ENST00000399641 IGLV3-27P01718 113 aa9.59□□□□□ -0.87
CACNA1C-217ENST00000399641 PSG9Q00887 426 aa9.59□□□□□ -0.87
CACNA1C-217ENST00000399641 RUNX1Q01196 453 aa9.59□□□□□ -0.87
CACNA1C-217ENST00000399641 SELENOHQ8IZQ5 122 aaKnown RBP9.59□□□□□ -0.87
CACNA1C-217ENST00000399641 SPSB1Q96BD6 273 aa9.59□□□□□ -0.87
CACNA1C-217ENST00000399641 MS4A6AQ9H2W1 248 aa9.59□□□□□ -0.87
CACNA1C-217ENST00000399641 PEF1Q9UBV8 284 aaKnown RBP9.59□□□□□ -0.87
CACNA1C-217ENST00000399641 EPDR1Q9UM22 224 aa9.59□□□□□ -0.87
CACNA1C-217ENST00000399641 TRGV4A0A0C4DH28 118 aa9.59□□□□□ -0.87
CACNA1C-217ENST00000399641 EVI2AP22794 236 aa9.59□□□□□ -0.87
CACNA1C-217ENST00000399641 ASIPP42127 132 aa9.59□□□□□ -0.87
CACNA1C-217ENST00000399641 LYZL2Q7Z4W2 148 aa9.59□□□□□ -0.87
CACNA1C-217ENST00000399641 MYH7P12883 1935 aa9.59□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 11.8 ms