RNA–Protein interactions for RNA: ENST00000399082.7

HLA-DQB1-203, Transcript of major histocompatibility complex, class II, DQ beta 1, humanhuman

BASIC

Gene HLA-DQB1, Length 1,219 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQB1-203ENST00000399082 RAMP3O60896 148 aa9.85□□□□□ -0.83
HLA-DQB1-203ENST00000399082 FCGR3BO75015 233 aa9.85□□□□□ -0.83
HLA-DQB1-203ENST00000399082 PEX14O75381 377 aa9.85□□□□□ -0.83
HLA-DQB1-203ENST00000399082 TSPAN9O75954 239 aa9.85□□□□□ -0.83
HLA-DQB1-203ENST00000399082 NDUFA7O95182 113 aa9.85□□□□□ -0.83
HLA-DQB1-203ENST00000399082 PGAM2P15259 253 aa9.85□□□□□ -0.83
HLA-DQB1-203ENST00000399082 RND3P61587 244 aa9.85□□□□□ -0.83
HLA-DQB1-203ENST00000399082 MMDQ15546 238 aa9.85□□□□□ -0.83
HLA-DQB1-203ENST00000399082 MRGPRG-AS1Q2M3A8 158 aa9.85□□□□□ -0.83
HLA-DQB1-203ENST00000399082 Q8N2B8 174 aa9.85□□□□□ -0.83
HLA-DQB1-203ENST00000399082 MDFIQ99750 246 aa9.85□□□□□ -0.83
HLA-DQB1-203ENST00000399082 PRRT1Q99946 306 aa9.85□□□□□ -0.83
HLA-DQB1-203ENST00000399082 RTBDNQ9BSG5 229 aaPredicted RBP9.85□□□□□ -0.83
HLA-DQB1-203ENST00000399082 C5orf66Q9H5L9 145 aa9.85□□□□□ -0.83
HLA-DQB1-203ENST00000399082 RAB18Q9NP72 206 aa9.85□□□□□ -0.83
HLA-DQB1-203ENST00000399082 SLC2A9Q9NRM0 540 aa9.85□□□□□ -0.83
HLA-DQB1-203ENST00000399082 TPSG1Q9NRR2 321 aa9.85□□□□□ -0.83
HLA-DQB1-203ENST00000399082 TBC1D24Q9ULP9 559 aa9.85□□□□□ -0.83
HLA-DQB1-203ENST00000399082 GPR132Q9UNW8 380 aa9.85□□□□□ -0.83
HLA-DQB1-203ENST00000399082 VSIG4Q9Y279 399 aa9.85□□□□□ -0.83
HLA-DQB1-203ENST00000399082 SIGLEC9Q9Y336 463 aa9.85□□□□□ -0.83
HLA-DQB1-203ENST00000399082 TMEM89A2RUT3 159 aa9.84□□□□□ -0.83
HLA-DQB1-203ENST00000399082 NBR2O15453 112 aa9.84□□□□□ -0.83
HLA-DQB1-203ENST00000399082 CRYZL1O95825 349 aa9.84□□□□□ -0.83
HLA-DQB1-203ENST00000399082 CRYGBP07316 175 aa9.84□□□□□ -0.83
HLA-DQB1-203ENST00000399082 CTSDP07339 412 aaPredicted RBP9.84□□□□□ -0.83
HLA-DQB1-203ENST00000399082 FAUP35544 74 aaKnown RBP9.84□□□□□ -0.83
HLA-DQB1-203ENST00000399082 RAG2P55895 527 aa9.84□□□□□ -0.83
HLA-DQB1-203ENST00000399082 TAGLNQ01995 201 aaKnown RBP9.84□□□□□ -0.83
HLA-DQB1-203ENST00000399082 PSG5Q15238 335 aa9.84□□□□□ -0.83
HLA-DQB1-203ENST00000399082 SURF2Q15527 256 aaPredicted RBP9.84□□□□□ -0.83
HLA-DQB1-203ENST00000399082 TMEM95Q3KNT9 176 aa9.84□□□□□ -0.83
HLA-DQB1-203ENST00000399082 ABCA11PQ4W5N1 156 aa9.84□□□□□ -0.83
HLA-DQB1-203ENST00000399082 ZNF585BQ52M93 769 aa9.84□□□□□ -0.83
HLA-DQB1-203ENST00000399082 LPCAT3Q6P1A2 487 aa9.84□□□□□ -0.83
HLA-DQB1-203ENST00000399082 TBC1D26Q86UD7 250 aa9.84□□□□□ -0.83
HLA-DQB1-203ENST00000399082 OR8H1Q8NGG4 311 aa9.84□□□□□ -0.83
HLA-DQB1-203ENST00000399082 OR4C13Q8NGP0 309 aa9.84□□□□□ -0.83
HLA-DQB1-203ENST00000399082 LINC01006Q8NI28 216 aa9.84□□□□□ -0.83
HLA-DQB1-203ENST00000399082 TMEM230Q96A57 120 aa9.84□□□□□ -0.83
HLA-DQB1-203ENST00000399082 FLYWCH2Q96CP2 140 aaKnown RBP9.84□□□□□ -0.83
HLA-DQB1-203ENST00000399082 ZNF486Q96H40 463 aaPredicted RBP9.84□□□□□ -0.83
HLA-DQB1-203ENST00000399082 HSPB9Q9BQS6 159 aa9.84□□□□□ -0.83
HLA-DQB1-203ENST00000399082 NPFFR1Q9GZQ6 430 aa9.84□□□□□ -0.83
HLA-DQB1-203ENST00000399082 C16orf95Q9H693 158 aa9.84□□□□□ -0.83
HLA-DQB1-203ENST00000399082 RANBP3Q9H6Z4 567 aaPredicted RBP9.84□□□□□ -0.83
HLA-DQB1-203ENST00000399082 COL6A5A8TX70 2615 aa9.84□□□□□ -0.83
HLA-DQB1-203ENST00000399082 TENM1Q9UKZ4 2725 aa9.84□□□□□ -0.84
HLA-DQB1-203ENST00000399082 PLXNB1O43157 2135 aa9.83□□□□□ -0.84
HLA-DQB1-203ENST00000399082 LINC01548A6NM66 108 aa9.83□□□□□ -0.84
HLA-DQB1-203ENST00000399082 NCBP2LA6PVI3 153 aaKnown RBP9.83□□□□□ -0.84
HLA-DQB1-203ENST00000399082 RRHO14718 337 aa9.83□□□□□ -0.84
HLA-DQB1-203ENST00000399082 UPK1BO75841 260 aa9.83□□□□□ -0.84
HLA-DQB1-203ENST00000399082 RRASP10301 218 aa9.83□□□□□ -0.84
HLA-DQB1-203ENST00000399082 MDKP21741 143 aaPredicted RBP9.83□□□□□ -0.84
HLA-DQB1-203ENST00000399082 F2RP25116 425 aa9.83□□□□□ -0.84
HLA-DQB1-203ENST00000399082 CCR6P51684 374 aa9.83□□□□□ -0.84
HLA-DQB1-203ENST00000399082 PIGPP57054 158 aa9.83□□□□□ -0.84
HLA-DQB1-203ENST00000399082 RPS16P62249 146 aaKnown RBP9.83□□□□□ -0.84
HLA-DQB1-203ENST00000399082 SSBP2P81877 361 aaPredicted RBP9.83□□□□□ -0.84
HLA-DQB1-203ENST00000399082 RTL8BQ17RB0 113 aa9.83□□□□□ -0.84
HLA-DQB1-203ENST00000399082 C5orf64Q2M2E5 130 aa9.83□□□□□ -0.84
HLA-DQB1-203ENST00000399082 KRTAP21-3Q3LHN1 58 aa9.83□□□□□ -0.84
HLA-DQB1-203ENST00000399082 SPAG16Q8N0X2 631 aa9.83□□□□□ -0.84
HLA-DQB1-203ENST00000399082 ADAD2Q8NCV1 583 aaKnown RBP9.83□□□□□ -0.84
HLA-DQB1-203ENST00000399082 OR4S2Q8NH73 311 aa9.83□□□□□ -0.84
HLA-DQB1-203ENST00000399082 BORCS5Q969J3 196 aa9.83□□□□□ -0.84
HLA-DQB1-203ENST00000399082 HARBI1Q96MB7 349 aa9.83□□□□□ -0.84
HLA-DQB1-203ENST00000399082 RNF5Q99942 180 aa9.83□□□□□ -0.84
HLA-DQB1-203ENST00000399082 FBXL15Q9H469 300 aa9.83□□□□□ -0.84
HLA-DQB1-203ENST00000399082 SERTAD4Q9NUC0 356 aa9.83□□□□□ -0.84
HLA-DQB1-203ENST00000399082 SCP2D1Q9UJQ7 156 aa9.83□□□□□ -0.84
HLA-DQB1-203ENST00000399082 PRELID3BQ9Y3B1 194 aa9.83□□□□□ -0.84
HLA-DQB1-203ENST00000399082 NAP1L6A6NFF2 107 aa9.82□□□□□ -0.84
HLA-DQB1-203ENST00000399082 RNF212BA8MTL3 300 aa9.82□□□□□ -0.84
HLA-DQB1-203ENST00000399082 M0QZK8 103 aa9.82□□□□□ -0.84
HLA-DQB1-203ENST00000399082 FCN1O00602 326 aa9.82□□□□□ -0.84
HLA-DQB1-203ENST00000399082 MPPED1O15442 326 aa9.82□□□□□ -0.84
HLA-DQB1-203ENST00000399082 RBFOX2O43251 390 aaKnown RBP eCLIP9.82□□□□□ -0.84
HLA-DQB1-203ENST00000399082 SLC25A17O43808 307 aa9.82□□□□□ -0.84
HLA-DQB1-203ENST00000399082 S1PR2O95136 353 aa9.82□□□□□ -0.84
HLA-DQB1-203ENST00000399082 IGKV1-39P01597 117 aa9.82□□□□□ -0.84
HLA-DQB1-203ENST00000399082 IGKV1D-39P04432 117 aa9.82□□□□□ -0.84
HLA-DQB1-203ENST00000399082 CRYBA1P05813 215 aa9.82□□□□□ -0.84
HLA-DQB1-203ENST00000399082 ECI1P42126 302 aa9.82□□□□□ -0.84
HLA-DQB1-203ENST00000399082 INPP1P49441 399 aa9.82□□□□□ -0.84
HLA-DQB1-203ENST00000399082 NDPQ00604 133 aa9.82□□□□□ -0.84
HLA-DQB1-203ENST00000399082 CATR1Q13166 79 aa9.82□□□□□ -0.84
HLA-DQB1-203ENST00000399082 CMTM1Q8IZ96 169 aa9.82□□□□□ -0.84
HLA-DQB1-203ENST00000399082 VKORC1L1Q8N0U8 176 aa9.82□□□□□ -0.84
HLA-DQB1-203ENST00000399082 OSR1Q8TAX0 266 aaPredicted RBP9.82□□□□□ -0.84
HLA-DQB1-203ENST00000399082 ZFAND1Q8TCF1 268 aa9.82□□□□□ -0.84
HLA-DQB1-203ENST00000399082 TMEM158Q8WZ71 300 aa9.82□□□□□ -0.84
HLA-DQB1-203ENST00000399082 TP53RKQ96S44 253 aa9.82□□□□□ -0.84
HLA-DQB1-203ENST00000399082 C7orf50Q9BRJ6 194 aaKnown RBP9.82□□□□□ -0.84
HLA-DQB1-203ENST00000399082 LIN7CQ9NUP9 197 aaKnown RBP9.82□□□□□ -0.84
HLA-DQB1-203ENST00000399082 IGHV7-81A0A0B4J1V7 117 aa9.81□□□□□ -0.84
HLA-DQB1-203ENST00000399082 SHOXO15266 292 aa9.81□□□□□ -0.84
HLA-DQB1-203ENST00000399082 LYRM1O43325 122 aa9.81□□□□□ -0.84
HLA-DQB1-203ENST00000399082 SPDEFO95238 335 aa9.81□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms