RNA–Protein interactions for RNA: ENST00000397406.5

TSPAN4-205, Transcript of tetraspanin 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TSPAN4, Length 1,426 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN4-205ENST00000397406 UXS1Q8NBZ7 420 aa13.68□□□□□ -0.22
TSPAN4-205ENST00000397406 OR11H7Q8NGC8 314 aa13.68□□□□□ -0.22
TSPAN4-205ENST00000397406 CDC42EP3Q9UKI2 254 aa13.68□□□□□ -0.22
TSPAN4-205ENST00000397406 TBL2Q9Y4P3 447 aaKnown RBP13.68□□□□□ -0.22
TSPAN4-205ENST00000397406 MINOS1-NBL1R4GNA1 71 aa13.68□□□□□ -0.22
TSPAN4-205ENST00000397406 TRAV40A0A0B4J280 105 aa13.67□□□□□ -0.22
TSPAN4-205ENST00000397406 IGHV1-69DA0A0B4J2H0 117 aa13.67□□□□□ -0.22
TSPAN4-205ENST00000397406 NPFFO15130 113 aa13.67□□□□□ -0.22
TSPAN4-205ENST00000397406 TXNL1O43396 289 aa13.67□□□□□ -0.22
TSPAN4-205ENST00000397406 IGHV1-69P01742 117 aa13.67□□□□□ -0.22
TSPAN4-205ENST00000397406 GAPDHP04406 335 aaKnown RBP13.67□□□□□ -0.22
TSPAN4-205ENST00000397406 TRAPPC2P0DI81 140 aa13.67□□□□□ -0.22
TSPAN4-205ENST00000397406 TRAPPC2BP0DI82 140 aa13.67□□□□□ -0.22
TSPAN4-205ENST00000397406 CEACAM3P40198 252 aa13.67□□□□□ -0.22
TSPAN4-205ENST00000397406 SRPXP78539 464 aa13.67□□□□□ -0.22
TSPAN4-205ENST00000397406 MIDNQ504T8 468 aa13.67□□□□□ -0.22
TSPAN4-205ENST00000397406 FAM120AOSQ5T036 256 aa13.67□□□□□ -0.22
TSPAN4-205ENST00000397406 SELENOHQ8IZQ5 122 aaKnown RBP13.67□□□□□ -0.22
TSPAN4-205ENST00000397406 PIP4P2Q8N4L2 257 aa13.67□□□□□ -0.22
TSPAN4-205ENST00000397406 OR5AN1Q8NGI8 311 aa13.67□□□□□ -0.22
TSPAN4-205ENST00000397406 RPEQ96AT9 228 aa13.67□□□□□ -0.22
TSPAN4-205ENST00000397406 AJUBAQ96IF1 538 aa13.67□□□□□ -0.22
TSPAN4-205ENST00000397406 PRELID3BQ9Y3B1 194 aa13.67□□□□□ -0.22
TSPAN4-205ENST00000397406 IGHV1-3A0A0C4DH29 117 aa13.66□□□□□ -0.22
TSPAN4-205ENST00000397406 A0A1W2PPI3 338 aa13.66□□□□□ -0.22
TSPAN4-205ENST00000397406 H0YJW9 148 aa13.66□□□□□ -0.22
TSPAN4-205ENST00000397406 RBFOX2O43251 390 aaKnown RBP eCLIP13.66□□□□□ -0.222e-6■■■■□ 21.7
TSPAN4-205ENST00000397406 FCGR3BO75015 233 aa13.66□□□□□ -0.22
TSPAN4-205ENST00000397406 SERPINE2P07093 398 aa13.66□□□□□ -0.22
TSPAN4-205ENST00000397406 IGHV4-38-2P0DP08 117 aa13.66□□□□□ -0.22
TSPAN4-205ENST00000397406 HLA-GP17693 338 aa13.66□□□□□ -0.22
TSPAN4-205ENST00000397406 CXCL3P19876 107 aa13.66□□□□□ -0.22
TSPAN4-205ENST00000397406 SAA4P35542 130 aa13.66□□□□□ -0.22
TSPAN4-205ENST00000397406 KIR2DS2P43631 304 aa13.66□□□□□ -0.22
TSPAN4-205ENST00000397406 LPAR6P43657 344 aa13.66□□□□□ -0.22
TSPAN4-205ENST00000397406 LGALS4P56470 323 aa13.66□□□□□ -0.22
TSPAN4-205ENST00000397406 KLF17Q5JT82 389 aaPredicted RBP13.66□□□□□ -0.22
TSPAN4-205ENST00000397406 TMEM268Q5VZI3 342 aa13.66□□□□□ -0.22
TSPAN4-205ENST00000397406 CD300LFQ8TDQ1 290 aa13.66□□□□□ -0.22
TSPAN4-205ENST00000397406 C17orf50Q8WW18 174 aa13.66□□□□□ -0.22
TSPAN4-205ENST00000397406 IL22RA2Q969J5 263 aa13.66□□□□□ -0.22
TSPAN4-205ENST00000397406 ADAP1O75689 374 aa13.65□□□□□ -0.22
TSPAN4-205ENST00000397406 RPA2P15927 270 aa13.65□□□□□ -0.22
TSPAN4-205ENST00000397406 GPR157Q5UAW9 335 aa13.65□□□□□ -0.22
TSPAN4-205ENST00000397406 LYZL2Q7Z4W2 148 aa13.65□□□□□ -0.22
TSPAN4-205ENST00000397406 ZNF695Q8IW36 515 aa13.65□□□□□ -0.22
TSPAN4-205ENST00000397406 DYNAPQ8N1N2 210 aa13.65□□□□□ -0.22
TSPAN4-205ENST00000397406 SLC35G3Q8N808 338 aa13.65□□□□□ -0.22
TSPAN4-205ENST00000397406 RBPMSQ93062 196 aaKnown RBP13.65□□□□□ -0.22
TSPAN4-205ENST00000397406 RAB18Q9NP72 206 aa13.65□□□□□ -0.22
TSPAN4-205ENST00000397406 SLC35D1Q9NTN3 355 aa13.65□□□□□ -0.22
TSPAN4-205ENST00000397406 MGAT4CQ9UBM8 478 aa13.65□□□□□ -0.22
TSPAN4-205ENST00000397406 IGHV3OR16-10A0A075B7F0 116 aa13.64□□□□□ -0.23
TSPAN4-205ENST00000397406 DUXBA0A1W2PPF3 345 aa13.64□□□□□ -0.23
TSPAN4-205ENST00000397406 OOSP1A8MZH6 123 aa13.64□□□□□ -0.23
TSPAN4-205ENST00000397406 CCSO14618 274 aa13.64□□□□□ -0.23
TSPAN4-205ENST00000397406 GOSR2O14653 212 aa13.64□□□□□ -0.23
TSPAN4-205ENST00000397406 S1PR2O95136 353 aa13.64□□□□□ -0.23
TSPAN4-205ENST00000397406 EPHA1P21709 976 aa13.64□□□□□ -0.23
TSPAN4-205ENST00000397406 TAGLNQ01995 201 aaKnown RBP13.64□□□□□ -0.23
TSPAN4-205ENST00000397406 RUSC1-AS1Q66K80 236 aa13.64□□□□□ -0.23
TSPAN4-205ENST00000397406 OR8H3Q8N146 312 aa13.64□□□□□ -0.23
TSPAN4-205ENST00000397406 OR5M8Q8NGP6 311 aa13.64□□□□□ -0.23
TSPAN4-205ENST00000397406 OR4S2Q8NH73 311 aa13.64□□□□□ -0.23
TSPAN4-205ENST00000397406 SPATA3Q8NHX4 192 aa13.64□□□□□ -0.23
TSPAN4-205ENST00000397406 RBMXL1Q96E39 390 aaKnown RBP13.64□□□□□ -0.23
TSPAN4-205ENST00000397406 MALSU1Q96EH3 234 aa13.64□□□□□ -0.23
TSPAN4-205ENST00000397406 PLEKHA2Q9HB19 425 aa13.64□□□□□ -0.23
TSPAN4-205ENST00000397406 HILPDAQ9Y5L2 63 aa13.64□□□□□ -0.23
TSPAN4-205ENST00000397406 HPRT1P00492 218 aa13.64□□□□□ -0.23
TSPAN4-205ENST00000397406 FSHBP01225 129 aa13.64□□□□□ -0.23
TSPAN4-205ENST00000397406 APOA2P02652 100 aa13.64□□□□□ -0.23
TSPAN4-205ENST00000397406 HOXB5P09067 269 aa13.64□□□□□ -0.23
TSPAN4-205ENST00000397406 GGNBP1Q5YKI7 109 aa13.64□□□□□ -0.23
TSPAN4-205ENST00000397406 BRD3OSQ6XYD6 125 aa13.64□□□□□ -0.23
TSPAN4-205ENST00000397406 CFHR4Q92496 578 aa13.64□□□□□ -0.23
TSPAN4-205ENST00000397406 STAB1Q9NY15 2570 aa13.63□□□□□ -0.23
TSPAN4-205ENST00000397406 MPTX1A8MV57 137 aa13.63□□□□□ -0.23
TSPAN4-205ENST00000397406 SIX6O95475 246 aa13.63□□□□□ -0.23
TSPAN4-205ENST00000397406 CRYZL1O95825 349 aa13.63□□□□□ -0.23
TSPAN4-205ENST00000397406 IGKV1-5P01602 117 aa13.63□□□□□ -0.23
TSPAN4-205ENST00000397406 IGKV1-16P04430 117 aa13.63□□□□□ -0.23
TSPAN4-205ENST00000397406 RRASP10301 218 aa13.63□□□□□ -0.23
TSPAN4-205ENST00000397406 PAX6P26367 422 aa13.63□□□□□ -0.23
TSPAN4-205ENST00000397406 MC5RP33032 325 aa13.63□□□□□ -0.23
TSPAN4-205ENST00000397406 H2BFSP57053 126 aa13.63□□□□□ -0.23
TSPAN4-205ENST00000397406 HABP2Q14520 560 aaPredicted RBP13.63□□□□□ -0.23
TSPAN4-205ENST00000397406 SSX2Q16385 188 aa13.63□□□□□ -0.23
TSPAN4-205ENST00000397406 RTL8BQ17RB0 113 aa13.63□□□□□ -0.23
TSPAN4-205ENST00000397406 KRTAP24-1Q3LI83 254 aa13.63□□□□□ -0.23
TSPAN4-205ENST00000397406 DHRS7BQ6IAN0 325 aaPredicted RBP13.63□□□□□ -0.23
TSPAN4-205ENST00000397406 MOB3BQ86TA1 216 aa13.63□□□□□ -0.23
TSPAN4-205ENST00000397406 PDPNQ86YL7 162 aa13.63□□□□□ -0.23
TSPAN4-205ENST00000397406 SEC22AQ96IW7 307 aa13.63□□□□□ -0.23
TSPAN4-205ENST00000397406 NEURL2Q9BR09 285 aa13.63□□□□□ -0.23
TSPAN4-205ENST00000397406 WASHC3Q9Y3C0 194 aa13.63□□□□□ -0.23
TSPAN4-205ENST00000397406 TMED3Q9Y3Q3 217 aa13.63□□□□□ -0.23
TSPAN4-205ENST00000397406 IGHV3-72A0A0B4J1Y9 119 aa13.62□□□□□ -0.23
TSPAN4-205ENST00000397406 PIGBOS1A0A0B4J2F0 54 aa13.62□□□□□ -0.23
TSPAN4-205ENST00000397406 TIMM23O14925 209 aa13.62□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 39.8 ms