RNA–Protein interactions for RNA: ENST00000397099.1

SEC13-204, Transcript of SEC13 homolog, nuclear pore and COPII coat complex component, humanhuman

TSL 4

Gene SEC13, Length 555 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC13-204ENST00000397099 BRI3O95415 125 aa10.86□□□□□ -0.67
SEC13-204ENST00000397099 UBE2KP61086 200 aa10.86□□□□□ -0.67
SEC13-204ENST00000397099 NDPQ00604 133 aa10.86□□□□□ -0.67
SEC13-204ENST00000397099 ZNF616Q08AN1 781 aa10.86□□□□□ -0.67
SEC13-204ENST00000397099 FXYD3Q14802 87 aa10.86□□□□□ -0.67
SEC13-204ENST00000397099 C9orf66Q5T8R8 295 aa10.86□□□□□ -0.67
SEC13-204ENST00000397099 UNQ5815/PRO19632Q6UWF5 114 aa10.86□□□□□ -0.67
SEC13-204ENST00000397099 OVCH2Q7RTZ1 564 aa10.86□□□□□ -0.67
SEC13-204ENST00000397099 HOGA1Q86XE5 327 aa10.86□□□□□ -0.67
SEC13-204ENST00000397099 OR11H1Q8NG94 326 aa10.86□□□□□ -0.67
SEC13-204ENST00000397099 OR5H6Q8NGV6 325 aa10.86□□□□□ -0.67
SEC13-204ENST00000397099 DDB2Q92466 427 aa10.86□□□□□ -0.67
SEC13-204ENST00000397099 CMTM3Q96MX0 182 aa10.86□□□□□ -0.67
SEC13-204ENST00000397099 AIFM2Q9BRQ8 373 aa10.86□□□□□ -0.67
SEC13-204ENST00000397099 AUNIPQ9H7T9 357 aa10.86□□□□□ -0.67
SEC13-204ENST00000397099 ELF5Q9UKW6 265 aaPredicted RBP10.86□□□□□ -0.67
SEC13-204ENST00000397099 IGKV1D-8A0A087WSZ0 117 aa10.85□□□□□ -0.67
SEC13-204ENST00000397099 A0A0G2JLM5 398 aa10.85□□□□□ -0.67
SEC13-204ENST00000397099 SSX5O60225 188 aa10.85□□□□□ -0.67
SEC13-204ENST00000397099 TUSC2O75896 110 aa10.85□□□□□ -0.67
SEC13-204ENST00000397099 IGLV2-23P01705 113 aa10.85□□□□□ -0.67
SEC13-204ENST00000397099 EGR2P11161 476 aaPredicted RBP10.85□□□□□ -0.67
SEC13-204ENST00000397099 KIR2DS2P43631 304 aa10.85□□□□□ -0.67
SEC13-204ENST00000397099 RAB25P57735 213 aa10.85□□□□□ -0.67
SEC13-204ENST00000397099 KIAA0141Q14154 515 aaPredicted RBP10.85□□□□□ -0.67
SEC13-204ENST00000397099 ZNF66Q6ZN08 573 aa10.85□□□□□ -0.67
SEC13-204ENST00000397099 KCTD9Q7L273 389 aa10.85□□□□□ -0.67
SEC13-204ENST00000397099 ZBTB34Q8NCN2 500 aa10.85□□□□□ -0.67
SEC13-204ENST00000397099 BVESQ8NE79 360 aa10.85□□□□□ -0.67
SEC13-204ENST00000397099 LFNGQ8NES3 379 aa10.85□□□□□ -0.67
SEC13-204ENST00000397099 OR1N2Q8NGR9 330 aa10.85□□□□□ -0.67
SEC13-204ENST00000397099 VSTM2AQ8TAG5 236 aa10.85□□□□□ -0.67
SEC13-204ENST00000397099 ACOT12Q8WYK0 555 aa10.85□□□□□ -0.67
SEC13-204ENST00000397099 SLC25A46Q96AG3 418 aa10.85□□□□□ -0.67
SEC13-204ENST00000397099 CLCC1Q96S66 551 aa10.85□□□□□ -0.67
SEC13-204ENST00000397099 KLK15Q9H2R5 256 aa10.85□□□□□ -0.67
SEC13-204ENST00000397099 RBMX2Q9Y388 322 aaKnown RBP10.85□□□□□ -0.67
SEC13-204ENST00000397099 COL7A1Q02388 2944 aa10.84□□□□□ -0.67
SEC13-204ENST00000397099 SMIM31A0A1B0GVY4 71 aa10.84□□□□□ -0.67
SEC13-204ENST00000397099 ACTL6BO94805 426 aa10.84□□□□□ -0.67
SEC13-204ENST00000397099 CRYZL1O95825 349 aa10.84□□□□□ -0.67
SEC13-204ENST00000397099 CRYGBP07316 175 aa10.84□□□□□ -0.67
SEC13-204ENST00000397099 LGALS1P09382 135 aaKnown RBP10.84□□□□□ -0.67
SEC13-204ENST00000397099 AADACP22760 399 aa10.84□□□□□ -0.67
SEC13-204ENST00000397099 NFYAP23511 347 aaPredicted RBP10.84□□□□□ -0.67
SEC13-204ENST00000397099 HOXD3P31249 432 aaPredicted RBP10.84□□□□□ -0.67
SEC13-204ENST00000397099 RPS19P39019 145 aaKnown RBP10.84□□□□□ -0.67
SEC13-204ENST00000397099 LINC00205P59089 165 aa10.84□□□□□ -0.67
SEC13-204ENST00000397099 DGCR2P98153 550 aa10.84□□□□□ -0.67
SEC13-204ENST00000397099 DEFB121Q5J5C9 76 aa10.84□□□□□ -0.67
SEC13-204ENST00000397099 TMEM69Q5SWH9 247 aa10.84□□□□□ -0.67
SEC13-204ENST00000397099 OR4S2Q8NH73 311 aa10.84□□□□□ -0.67
SEC13-204ENST00000397099 RBMXL1Q96E39 390 aaKnown RBP10.84□□□□□ -0.67
SEC13-204ENST00000397099 FBXO7Q9Y3I1 522 aa10.84□□□□□ -0.67
SEC13-204ENST00000397099 A3GALT2U3KPV4 340 aa10.84□□□□□ -0.67
SEC13-204ENST00000397099 LINC00473A8K010 186 aa10.83□□□□□ -0.68
SEC13-204ENST00000397099 DEFB136Q30KP8 78 aa10.83□□□□□ -0.68
SEC13-204ENST00000397099 POC5Q8NA72 575 aa10.83□□□□□ -0.68
SEC13-204ENST00000397099 OR5AP2Q8NGF4 316 aa10.83□□□□□ -0.68
SEC13-204ENST00000397099 GRPEL2Q8TAA5 225 aa10.83□□□□□ -0.68
SEC13-204ENST00000397099 DCUN1D5Q9BTE7 237 aa10.83□□□□□ -0.68
SEC13-204ENST00000397099 GNB4Q9HAV0 340 aa10.83□□□□□ -0.68
SEC13-204ENST00000397099 IFT46Q9NQC8 304 aa10.83□□□□□ -0.68
SEC13-204ENST00000397099 LINC01619G3V211 115 aa10.82□□□□□ -0.68
SEC13-204ENST00000397099 SOX15O60248 233 aa10.82□□□□□ -0.68
SEC13-204ENST00000397099 HRASP01112 189 aa10.82□□□□□ -0.68
SEC13-204ENST00000397099 APOA1P02647 267 aa10.82□□□□□ -0.68
SEC13-204ENST00000397099 FCGR2CP31995 323 aa10.82□□□□□ -0.68
SEC13-204ENST00000397099 TPPP2P59282 170 aa10.82□□□□□ -0.68
SEC13-204ENST00000397099 TAS2R46P59540 309 aa10.82□□□□□ -0.68
SEC13-204ENST00000397099 KRTAP10-11P60412 298 aa10.82□□□□□ -0.68
SEC13-204ENST00000397099 GNB1P62873 340 aa10.82□□□□□ -0.68
SEC13-204ENST00000397099 CDK10Q15131 360 aa10.82□□□□□ -0.68
SEC13-204ENST00000397099 ZNF429Q86V71 674 aa10.82□□□□□ -0.68
SEC13-204ENST00000397099 MMD2Q8IY49 270 aa10.82□□□□□ -0.68
SEC13-204ENST00000397099 SAMD12Q8N8I0 201 aa10.82□□□□□ -0.68
SEC13-204ENST00000397099 OR13F1Q8NGS4 319 aa10.82□□□□□ -0.68
SEC13-204ENST00000397099 GIMAP1Q8WWP7 306 aa10.82□□□□□ -0.68
SEC13-204ENST00000397099 AP3S1Q92572 193 aa10.82□□□□□ -0.68
SEC13-204ENST00000397099 C5orf30Q96GV9 206 aa10.82□□□□□ -0.68
SEC13-204ENST00000397099 USMG5Q96IX5 58 aa10.82□□□□□ -0.68
SEC13-204ENST00000397099 DUX3Q96PT4 197 aa10.82□□□□□ -0.68
SEC13-204ENST00000397099 SPIN2AQ99865 258 aa10.82□□□□□ -0.68
SEC13-204ENST00000397099 SPIN2BQ9BPZ2 258 aa10.82□□□□□ -0.68
SEC13-204ENST00000397099 FAM103A1Q9BTL3 118 aaKnown RBP10.82□□□□□ -0.68
SEC13-204ENST00000397099 FUNDC2Q9BWH2 189 aa10.82□□□□□ -0.68
SEC13-204ENST00000397099 C13orf42A0A1B0GVH6 325 aa10.81□□□□□ -0.68
SEC13-204ENST00000397099 WI2-2373I1.2A0A1W2PRP0 233 aa10.81□□□□□ -0.68
SEC13-204ENST00000397099 SRRM4A7MD48 611 aaKnown RBP10.81□□□□□ -0.68
SEC13-204ENST00000397099 SEC14L6B5MCN3 397 aa10.81□□□□□ -0.68
SEC13-204ENST00000397099 K7EIL1 84 aa10.81□□□□□ -0.68
SEC13-204ENST00000397099 RBFOX2O43251 390 aaKnown RBP eCLIP10.81□□□□□ -0.68
SEC13-204ENST00000397099 FCGR3BO75015 233 aa10.81□□□□□ -0.68
SEC13-204ENST00000397099 PPYP01298 95 aa10.81□□□□□ -0.68
SEC13-204ENST00000397099 TRGV3P03979 118 aa10.81□□□□□ -0.68
SEC13-204ENST00000397099 HSPB1P04792 205 aaKnown RBP10.81□□□□□ -0.68
SEC13-204ENST00000397099 MAS1LP35410 378 aa10.81□□□□□ -0.68
SEC13-204ENST00000397099 RORCP51449 518 aa10.81□□□□□ -0.68
SEC13-204ENST00000397099 LSM3P62310 102 aaKnown RBP10.81□□□□□ -0.68
SEC13-204ENST00000397099 CATR1Q13166 79 aa10.81□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms