RNA–Protein interactions for RNA: ENST00000395246.5

CDC42SE2-202, Transcript of CDC42 small effector 2, humanhuman

APPRIS P1 TSL 5 BASIC

Gene CDC42SE2, Length 3,485 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42SE2-202ENST00000395246 ODF3BA8MYP8 253 aa11.57□□□□□ -0.56
CDC42SE2-202ENST00000395246 DVL1O14640 695 aa11.57□□□□□ -0.56
CDC42SE2-202ENST00000395246 TPRX1Q8N7U7 411 aa11.57□□□□□ -0.56
CDC42SE2-202ENST00000395246 NDUFB3O43676 98 aa11.57□□□□□ -0.56
CDC42SE2-202ENST00000395246 IGHV1-8P0DP01 117 aa11.57□□□□□ -0.56
CDC42SE2-202ENST00000395246 F2RL1P55085 397 aa11.57□□□□□ -0.56
CDC42SE2-202ENST00000395246 SERF2P84101 59 aa11.57□□□□□ -0.56
CDC42SE2-202ENST00000395246 PJVKQ0ZLH3 352 aa11.57□□□□□ -0.56
CDC42SE2-202ENST00000395246 PDPNQ86YL7 162 aa11.57□□□□□ -0.56
CDC42SE2-202ENST00000395246 MBD3L1Q8WWY6 194 aa11.57□□□□□ -0.56
CDC42SE2-202ENST00000395246 GPHA2Q96T91 129 aa11.57□□□□□ -0.56
CDC42SE2-202ENST00000395246 RNF150Q9ULK6 438 aa11.57□□□□□ -0.56
CDC42SE2-202ENST00000395246 IGLV2-23P01705 113 aa11.56□□□□□ -0.56
CDC42SE2-202ENST00000395246 CHODLQ9H9P2 273 aa11.56□□□□□ -0.56
CDC42SE2-202ENST00000395246 RALYQ9UKM9 306 aaKnown RBP11.56□□□□□ -0.56
CDC42SE2-202ENST00000395246 J3QR06 171 aa11.56□□□□□ -0.56
CDC42SE2-202ENST00000395246 HFEQ30201 348 aa11.56□□□□□ -0.56
CDC42SE2-202ENST00000395246 ZNF114Q8NC26 417 aa11.56□□□□□ -0.56
CDC42SE2-202ENST00000395246 R3HDM4Q96D70 268 aa11.56□□□□□ -0.56
CDC42SE2-202ENST00000395246 A0A1W2PPR1 153 aa11.56□□□□□ -0.56
CDC42SE2-202ENST00000395246 FAM24AA6NFZ4 105 aa11.56□□□□□ -0.56
CDC42SE2-202ENST00000395246 H0YJW9 148 aa11.56□□□□□ -0.56
CDC42SE2-202ENST00000395246 SSSCA1O60232 199 aa11.56□□□□□ -0.56
CDC42SE2-202ENST00000395246 OR9G9P0C7N8 305 aa11.56□□□□□ -0.56
CDC42SE2-202ENST00000395246 OR4C12Q96R67 309 aa11.56□□□□□ -0.56
CDC42SE2-202ENST00000395246 PRELID3BQ9Y3B1 194 aa11.56□□□□□ -0.56
CDC42SE2-202ENST00000395246 EPHA1P21709 976 aa11.55□□□□□ -0.56
CDC42SE2-202ENST00000395246 RPL31P62899 125 aaKnown RBP11.55□□□□□ -0.56
CDC42SE2-202ENST00000395246 TLE4Q04727 773 aa11.55□□□□□ -0.56
CDC42SE2-202ENST00000395246 SSX2Q16385 188 aa11.55□□□□□ -0.56
CDC42SE2-202ENST00000395246 RAB1BQ9H0U4 201 aa11.55□□□□□ -0.56
CDC42SE2-202ENST00000395246 F12P00748 615 aaPredicted RBP11.55□□□□□ -0.56
CDC42SE2-202ENST00000395246 COL8A2P25067 703 aa11.55□□□□□ -0.56
CDC42SE2-202ENST00000395246 ARL16Q0P5N6 197 aa11.55□□□□□ -0.56
CDC42SE2-202ENST00000395246 OR1S2Q8NGQ3 325 aa11.55□□□□□ -0.56
CDC42SE2-202ENST00000395246 IGHV3-64DA0A0J9YX35 117 aa11.55□□□□□ -0.56
CDC42SE2-202ENST00000395246 FAM90A27PA6NNH2 459 aa11.55□□□□□ -0.56
CDC42SE2-202ENST00000395246 C15orf62A8K5M9 175 aa11.55□□□□□ -0.56
CDC42SE2-202ENST00000395246 SNCAP37840 140 aa11.55□□□□□ -0.56
CDC42SE2-202ENST00000395246 DYNLT3P51808 116 aa11.55□□□□□ -0.56
CDC42SE2-202ENST00000395246 LY6DQ14210 128 aa11.55□□□□□ -0.56
CDC42SE2-202ENST00000395246 TCTEX1D2Q8WW35 142 aa11.55□□□□□ -0.56
CDC42SE2-202ENST00000395246 HRNRQ86YZ3 2850 aaPredicted RBP11.55□□□□□ -0.56
CDC42SE2-202ENST00000395246 SPSB3Q6PJ21 355 aa11.54□□□□□ -0.56
CDC42SE2-202ENST00000395246 LFNGQ8NES3 379 aa11.54□□□□□ -0.56
CDC42SE2-202ENST00000395246 OR9G1Q8NH87 305 aa11.54□□□□□ -0.56
CDC42SE2-202ENST00000395246 TMEM170AQ8WVE7 144 aa11.54□□□□□ -0.56
CDC42SE2-202ENST00000395246 NABP2Q9BQ15 211 aa11.54□□□□□ -0.56
CDC42SE2-202ENST00000395246 WDR61Q9GZS3 305 aaKnown RBP11.54□□□□□ -0.56
CDC42SE2-202ENST00000395246 TMEM133Q9H2Q1 129 aa11.54□□□□□ -0.56
CDC42SE2-202ENST00000395246 KCNS2Q9ULS6 477 aa11.54□□□□□ -0.56
CDC42SE2-202ENST00000395246 TET2Q6N021 2002 aaPredicted RBP11.54□□□□□ -0.56
CDC42SE2-202ENST00000395246 TMPRSS2O15393 492 aa11.54□□□□□ -0.56
CDC42SE2-202ENST00000395246 FBXO24O75426 580 aa11.54□□□□□ -0.56
CDC42SE2-202ENST00000395246 H2AFB1P0C5Y9 115 aa11.54□□□□□ -0.56
CDC42SE2-202ENST00000395246 EDDM3AQ14507 147 aa11.54□□□□□ -0.56
CDC42SE2-202ENST00000395246 UPK2O00526 184 aa11.54□□□□□ -0.56
CDC42SE2-202ENST00000395246 G6PCP35575 357 aa11.54□□□□□ -0.56
CDC42SE2-202ENST00000395246 RPL39P5Q59GN2 51 aa11.54□□□□□ -0.56
CDC42SE2-202ENST00000395246 TMEM167AQ8TBQ9 72 aa11.54□□□□□ -0.56
CDC42SE2-202ENST00000395246 TMED6Q8WW62 240 aa11.54□□□□□ -0.56
CDC42SE2-202ENST00000395246 SEC11CQ9BY50 192 aa11.54□□□□□ -0.56
CDC42SE2-202ENST00000395246 PATZ1Q9HBE1 687 aaKnown RBP11.54□□□□□ -0.56
CDC42SE2-202ENST00000395246 GNG12Q9UBI6 72 aa11.54□□□□□ -0.56
CDC42SE2-202ENST00000395246 LSM4Q9Y4Z0 139 aaKnown RBP11.54□□□□□ -0.56
CDC42SE2-202ENST00000395246 SMG1Q96Q15 3661 aaKnown RBP11.53□□□□□ -0.56
CDC42SE2-202ENST00000395246 PAX6P26367 422 aa11.53□□□□□ -0.56
CDC42SE2-202ENST00000395246 S1PR3Q99500 378 aa11.53□□□□□ -0.56
CDC42SE2-202ENST00000395246 SRSF8Q9BRL6 282 aaKnown RBP11.53□□□□□ -0.56
CDC42SE2-202ENST00000395246 PSENENQ9NZ42 101 aa11.53□□□□□ -0.56
CDC42SE2-202ENST00000395246 VWC2LB2RUY7 222 aa11.53□□□□□ -0.56
CDC42SE2-202ENST00000395246 FAM74A1Q5RGS3 127 aa11.53□□□□□ -0.56
CDC42SE2-202ENST00000395246 HCP5Q6MZN7 132 aa11.53□□□□□ -0.56
CDC42SE2-202ENST00000395246 STX12Q86Y82 276 aa11.53□□□□□ -0.56
CDC42SE2-202ENST00000395246 PNKDQ8N490 385 aa11.53□□□□□ -0.56
CDC42SE2-202ENST00000395246 PRR18Q8N4B5 295 aa11.53□□□□□ -0.56
CDC42SE2-202ENST00000395246 OR5C1Q8NGR4 320 aa11.53□□□□□ -0.56
CDC42SE2-202ENST00000395246 A0A1W2PPH5 198 aa11.52□□□□□ -0.56
CDC42SE2-202ENST00000395246 MPDU1O75352 247 aa11.52□□□□□ -0.56
CDC42SE2-202ENST00000395246 SOD3P08294 240 aa11.52□□□□□ -0.56
CDC42SE2-202ENST00000395246 ATP6V0CP27449 155 aa11.52□□□□□ -0.56
CDC42SE2-202ENST00000395246 HBG1P69891 147 aa11.52□□□□□ -0.56
CDC42SE2-202ENST00000395246 HBG2P69892 147 aa11.52□□□□□ -0.56
CDC42SE2-202ENST00000395246 PRCDQ00LT1 54 aa11.52□□□□□ -0.56
CDC42SE2-202ENST00000395246 PXDC1Q5TGL8 231 aa11.52□□□□□ -0.56
CDC42SE2-202ENST00000395246 ZGRF1Q86YA3 2104 aa11.52□□□□□ -0.56
CDC42SE2-202ENST00000395246 FAM122AQ96E09 287 aa11.52□□□□□ -0.56
CDC42SE2-202ENST00000395246 NEIL1Q96FI4 390 aaPredicted RBP11.52□□□□□ -0.56
CDC42SE2-202ENST00000395246 DYNLRB1Q9NP97 96 aa11.52□□□□□ -0.56
CDC42SE2-202ENST00000395246 HRASP01112 189 aa11.52□□□□□ -0.57
CDC42SE2-202ENST00000395246 DLK1P80370 383 aa11.52□□□□□ -0.57
CDC42SE2-202ENST00000395246 PRAMEF5Q5TYX0 476 aa11.52□□□□□ -0.57
CDC42SE2-202ENST00000395246 H2BFWTQ7Z2G1 175 aa11.52□□□□□ -0.57
CDC42SE2-202ENST00000395246 OR5B3Q8NH48 314 aa11.52□□□□□ -0.57
CDC42SE2-202ENST00000395246 RAB1CQ92928 201 aa11.52□□□□□ -0.57
CDC42SE2-202ENST00000395246 FKBP11Q9NYL4 201 aa11.52□□□□□ -0.57
CDC42SE2-202ENST00000395246 SH3BGRL2Q9UJC5 107 aa11.52□□□□□ -0.57
CDC42SE2-202ENST00000395246 PRNDQ9UKY0 176 aa11.52□□□□□ -0.57
CDC42SE2-202ENST00000395246 IGHV3-43A0A0B4J1X8 118 aa11.52□□□□□ -0.57
CDC42SE2-202ENST00000395246 TMEM218A2RU14 115 aa11.52□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 35.3 ms