RNA–Protein interactions for RNA: ENST00000378778.5

PTPRR-203, Transcript of protein tyrosine phosphatase, receptor type R, humanhuman

TSL 1 (best) BASIC

Gene PTPRR, Length 2,632 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRR-203ENST00000378778 PRSS8Q16651 343 aa6.89□□□□□ -1.31
PTPRR-203ENST00000378778 PET117Q6UWS5 81 aa6.89□□□□□ -1.31
PTPRR-203ENST00000378778 CPEB3Q8NE35 698 aaKnown RBP6.89□□□□□ -1.31
PTPRR-203ENST00000378778 OR1L6Q8NGR2 347 aa6.89□□□□□ -1.31
PTPRR-203ENST00000378778 C22orf15Q8WYQ4 148 aa6.89□□□□□ -1.31
PTPRR-203ENST00000378778 CORO2AQ92828 525 aa6.89□□□□□ -1.31
PTPRR-203ENST00000378778 GPHA2Q96T91 129 aa6.89□□□□□ -1.31
PTPRR-203ENST00000378778 HSD17B10Q99714 261 aaKnown RBP6.89□□□□□ -1.31
PTPRR-203ENST00000378778 DUSP23Q9BVJ7 150 aa6.89□□□□□ -1.31
PTPRR-203ENST00000378778 RTL8AQ9BWD3 113 aa6.89□□□□□ -1.31
PTPRR-203ENST00000378778 ZNF552Q9H707 407 aaPredicted RBP6.89□□□□□ -1.31
PTPRR-203ENST00000378778 BET1LQ9NYM9 111 aa6.89□□□□□ -1.31
PTPRR-203ENST00000378778 OR1A1Q9P1Q5 309 aa6.89□□□□□ -1.31
PTPRR-203ENST00000378778 SLC25A10Q9UBX3 287 aaPredicted RBP6.89□□□□□ -1.31
PTPRR-203ENST00000378778 TRAPPC2LQ9UL33 140 aa6.89□□□□□ -1.31
PTPRR-203ENST00000378778 LAMTOR2Q9Y2Q5 125 aa6.89□□□□□ -1.31
PTPRR-203ENST00000378778 TBL2Q9Y4P3 447 aaKnown RBP6.89□□□□□ -1.31
PTPRR-203ENST00000378778 FCN1O00602 326 aa6.89□□□□□ -1.31
PTPRR-203ENST00000378778 SH2D1BO14796 132 aa6.89□□□□□ -1.31
PTPRR-203ENST00000378778 C1QTNF9P0C862 333 aa6.89□□□□□ -1.31
PTPRR-203ENST00000378778 IGLC2P0DOY2 106 aa6.89□□□□□ -1.31
PTPRR-203ENST00000378778 IGLC3P0DOY3 106 aa6.89□□□□□ -1.31
PTPRR-203ENST00000378778 WNT5AP41221 380 aa6.89□□□□□ -1.31
PTPRR-203ENST00000378778 HNRNPA3P51991 378 aaKnown RBP6.89□□□□□ -1.31
PTPRR-203ENST00000378778 PLP2Q04941 152 aa6.89□□□□□ -1.31
PTPRR-203ENST00000378778 UBE2V1Q13404 147 aa6.89□□□□□ -1.31
PTPRR-203ENST00000378778 ZNF718Q3SXZ3 478 aa6.89□□□□□ -1.31
PTPRR-203ENST00000378778 FBXO46Q6PJ61 603 aaPredicted RBP6.89□□□□□ -1.31
PTPRR-203ENST00000378778 H2BFWTQ7Z2G1 175 aa6.89□□□□□ -1.31
PTPRR-203ENST00000378778 ZNF738Q8NE65 137 aa6.89□□□□□ -1.31
PTPRR-203ENST00000378778 VN1R17PQ8TDU5 208 aa6.89□□□□□ -1.31
PTPRR-203ENST00000378778 GATAD1Q8WUU5 269 aa6.89□□□□□ -1.31
PTPRR-203ENST00000378778 ALKBH3Q96Q83 286 aaPredicted RBP6.89□□□□□ -1.31
PTPRR-203ENST00000378778 SLC35D1Q9NTN3 355 aa6.89□□□□□ -1.31
PTPRR-203ENST00000378778 PAM16Q9Y3D7 125 aa6.89□□□□□ -1.31
PTPRR-203ENST00000378778 EML6Q6ZMW3 1958 aa6.89□□□□□ -1.31
PTPRR-203ENST00000378778 TMEM30CPA0ZSE6 113 aa6.88□□□□□ -1.31
PTPRR-203ENST00000378778 SYNGR1O43759 233 aa6.88□□□□□ -1.31
PTPRR-203ENST00000378778 PF4P02776 101 aa6.88□□□□□ -1.31
PTPRR-203ENST00000378778 P04436 131 aa6.88□□□□□ -1.31
PTPRR-203ENST00000378778 SELEP16581 610 aa6.88□□□□□ -1.31
PTPRR-203ENST00000378778 UBE2G2P60604 165 aa6.88□□□□□ -1.31
PTPRR-203ENST00000378778 ERVK11-1P61568 191 aa6.88□□□□□ -1.31
PTPRR-203ENST00000378778 CX3CL1P78423 397 aa6.88□□□□□ -1.31
PTPRR-203ENST00000378778 HTD2P86397 168 aa6.88□□□□□ -1.31
PTPRR-203ENST00000378778 TFF3Q07654 80 aa6.88□□□□□ -1.31
PTPRR-203ENST00000378778 SPATA45Q537H7 98 aa6.88□□□□□ -1.31
PTPRR-203ENST00000378778 SLC35E4Q6ICL7 350 aa6.88□□□□□ -1.31
PTPRR-203ENST00000378778 LRP11Q86VZ4 500 aa6.88□□□□□ -1.31
PTPRR-203ENST00000378778 Q8N7P7 452 aa6.88□□□□□ -1.31
PTPRR-203ENST00000378778 Q8N976 141 aa6.88□□□□□ -1.31
PTPRR-203ENST00000378778 FGFBP3Q8TAT2 258 aa6.88□□□□□ -1.31
PTPRR-203ENST00000378778 THOC3Q96J01 351 aaKnown RBP6.88□□□□□ -1.31
PTPRR-203ENST00000378778 OOEPA6NGQ2 149 aa6.88□□□□□ -1.31
PTPRR-203ENST00000378778 RBFOX2O43251 390 aaKnown RBP eCLIP6.88□□□□□ -1.31
PTPRR-203ENST00000378778 S1PR2O95136 353 aa6.88□□□□□ -1.31
PTPRR-203ENST00000378778 ATP5G3P48201 142 aa6.88□□□□□ -1.31
PTPRR-203ENST00000378778 ATP5IP56385 69 aaPredicted RBP6.88□□□□□ -1.31
PTPRR-203ENST00000378778 PMP22Q01453 160 aa6.88□□□□□ -1.31
PTPRR-203ENST00000378778 RAB31Q13636 194 aa6.88□□□□□ -1.31
PTPRR-203ENST00000378778 GABRA6Q16445 453 aa6.88□□□□□ -1.31
PTPRR-203ENST00000378778 IZUMO4Q1ZYL8 232 aa6.88□□□□□ -1.31
PTPRR-203ENST00000378778 CLEC12BQ2HXU8 276 aa6.88□□□□□ -1.31
PTPRR-203ENST00000378778 OR1K1Q8NGR3 316 aa6.88□□□□□ -1.31
PTPRR-203ENST00000378778 OR1L1Q8NH94 360 aa6.88□□□□□ -1.31
PTPRR-203ENST00000378778 OCC1Q8TAD7 63 aa6.88□□□□□ -1.31
PTPRR-203ENST00000378778 MRGPRDQ8TDS7 321 aa6.88□□□□□ -1.31
PTPRR-203ENST00000378778 WIPF2Q8TF74 440 aaPredicted RBP6.88□□□□□ -1.31
PTPRR-203ENST00000378778 IL1F10Q8WWZ1 152 aa6.88□□□□□ -1.31
PTPRR-203ENST00000378778 GALMQ96C23 342 aa6.88□□□□□ -1.31
PTPRR-203ENST00000378778 STARD4Q96DR4 205 aa6.88□□□□□ -1.31
PTPRR-203ENST00000378778 C19orf24Q9BVV8 132 aa6.88□□□□□ -1.31
PTPRR-203ENST00000378778 TMEM167BQ9NRX6 74 aa6.88□□□□□ -1.31
PTPRR-203ENST00000378778 A6NNC1 897 aa6.87□□□□□ -1.31
PTPRR-203ENST00000378778 C15orf62A8K5M9 175 aa6.87□□□□□ -1.31
PTPRR-203ENST00000378778 HMGB3O15347 200 aaKnown RBP6.87□□□□□ -1.31
PTPRR-203ENST00000378778 CXCL13O43927 109 aa6.87□□□□□ -1.31
PTPRR-203ENST00000378778 WDR1O75083 606 aa6.87□□□□□ -1.31
PTPRR-203ENST00000378778 MRPL33O75394 65 aaKnown RBP6.87□□□□□ -1.31
PTPRR-203ENST00000378778 AMY1AP04745 511 aa6.87□□□□□ -1.31
PTPRR-203ENST00000378778 COX6A1P12074 109 aa6.87□□□□□ -1.31
PTPRR-203ENST00000378778 KIR2DS2P43631 304 aa6.87□□□□□ -1.31
PTPRR-203ENST00000378778 RSPO4Q2I0M5 234 aaPredicted RBP6.87□□□□□ -1.31
PTPRR-203ENST00000378778 MMD2Q8IY49 270 aa6.87□□□□□ -1.31
PTPRR-203ENST00000378778 OR4P4Q8NGL7 312 aa6.87□□□□□ -1.31
PTPRR-203ENST00000378778 OR10D3Q8NH80 312 aa6.87□□□□□ -1.31
PTPRR-203ENST00000378778 POM121L2Q96KW2 1035 aa6.87□□□□□ -1.31
PTPRR-203ENST00000378778 LRFN3Q9BTN0 628 aa6.87□□□□□ -1.31
PTPRR-203ENST00000378778 NRN1Q9NPD7 142 aa6.87□□□□□ -1.31
PTPRR-203ENST00000378778 OCIAD1Q9NX40 245 aa6.87□□□□□ -1.31
PTPRR-203ENST00000378778 C1RLQ9NZP8 487 aa6.87□□□□□ -1.31
PTPRR-203ENST00000378778 KMT2EQ8IZD2 1858 aa6.87□□□□□ -1.31
PTPRR-203ENST00000378778 ISLRO14498 428 aa6.87□□□□□ -1.31
PTPRR-203ENST00000378778 TCF21O43680 179 aa6.87□□□□□ -1.31
PTPRR-203ENST00000378778 ZNF324O75467 553 aaPredicted RBP6.87□□□□□ -1.31
PTPRR-203ENST00000378778 PATE4P0C8F1 98 aa6.87□□□□□ -1.31
PTPRR-203ENST00000378778 NTF4P34130 210 aa6.87□□□□□ -1.31
PTPRR-203ENST00000378778 PTTG1IPP53801 180 aa6.87□□□□□ -1.31
PTPRR-203ENST00000378778 ARF1P84077 181 aaKnown RBP6.87□□□□□ -1.31
PTPRR-203ENST00000378778 RAB30Q15771 203 aa6.87□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 43.5 ms