RNA–Protein interactions for RNA: ENST00000378725.3

SSU72-203, Transcript of SSU72 homolog, RNA polymerase II CTD phosphatase, humanhuman

TSL 2

Gene SSU72, Length 619 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSU72-203ENST00000378725 OR4C16Q8NGL9 310 aa14.85□□□□□ -0.03
SSU72-203ENST00000378725 GPHA2Q96T91 129 aa14.85□□□□□ -0.03
SSU72-203ENST00000378725 TSNAXQ99598 290 aaKnown RBP14.85□□□□□ -0.03
SSU72-203ENST00000378725 SDHCQ99643 169 aaPredicted RBP14.85□□□□□ -0.03
SSU72-203ENST00000378725 ZNF747Q9BV97 191 aa14.85□□□□□ -0.03
SSU72-203ENST00000378725 WNT10AQ9GZT5 417 aa14.85□□□□□ -0.03
SSU72-203ENST00000378725 PTTG2Q9NZH5 202 aa14.85□□□□□ -0.03
SSU72-203ENST00000378725 COL6A5A8TX70 2615 aa14.84□□□□□ -0.03
SSU72-203ENST00000378725 SRRM4A7MD48 611 aaKnown RBP14.84□□□□□ -0.03
SSU72-203ENST00000378725 DISC1C4P0D8 188 aa14.84□□□□□ -0.03
SSU72-203ENST00000378725 GPR31O00270 319 aa14.84□□□□□ -0.03
SSU72-203ENST00000378725 TNFSF12O43508 249 aa14.84□□□□□ -0.03
SSU72-203ENST00000378725 PGLYRP1O75594 196 aaPredicted RBP14.84□□□□□ -0.03
SSU72-203ENST00000378725 SPDEFO95238 335 aa14.84□□□□□ -0.03
SSU72-203ENST00000378725 IGLV2-23P01705 113 aa14.84□□□□□ -0.03
SSU72-203ENST00000378725 CBX3Q13185 183 aa14.84□□□□□ -0.03
SSU72-203ENST00000378725 KLF9Q13886 244 aaPredicted RBP14.84□□□□□ -0.03
SSU72-203ENST00000378725 PSG5Q15238 335 aa14.84□□□□□ -0.03
SSU72-203ENST00000378725 SLC38A6Q8IZM9 456 aa14.84□□□□□ -0.03
SSU72-203ENST00000378725 TCTEX1D2Q8WW35 142 aa14.84□□□□□ -0.03
SSU72-203ENST00000378725 KIAA1456Q9P272 454 aa14.84□□□□□ -0.03
SSU72-203ENST00000378725 FCGR3BO75015 233 aa14.83□□□□□ -0.04
SSU72-203ENST00000378725 CRYGBP07316 175 aa14.83□□□□□ -0.04
SSU72-203ENST00000378725 KIR2DS2P43631 304 aa14.83□□□□□ -0.04
SSU72-203ENST00000378725 VDAC2P45880 294 aaPredicted RBP14.83□□□□□ -0.04
SSU72-203ENST00000378725 C9orf152Q5JTZ5 239 aa14.83□□□□□ -0.04
SSU72-203ENST00000378725 LIN54Q6MZP7 749 aa14.83□□□□□ -0.04
SSU72-203ENST00000378725 FAAP20Q6NZ36 180 aa14.83□□□□□ -0.04
SSU72-203ENST00000378725 CMTM1Q8IZ96 169 aa14.83□□□□□ -0.04
SSU72-203ENST00000378725 C3orf56Q8N813 242 aa14.83□□□□□ -0.04
SSU72-203ENST00000378725 OSR1Q8TAX0 266 aaPredicted RBP14.83□□□□□ -0.04
SSU72-203ENST00000378725 WFDC12Q8WWY7 111 aa14.83□□□□□ -0.04
SSU72-203ENST00000378725 DEDD2Q8WXF8 326 aa14.83□□□□□ -0.04
SSU72-203ENST00000378725 MRGPRFQ96AM1 343 aa14.83□□□□□ -0.04
SSU72-203ENST00000378725 SLC2A8Q9NY64 477 aa14.83□□□□□ -0.04
SSU72-203ENST00000378725 LINC01548A6NM66 108 aa14.82□□□□□ -0.04
SSU72-203ENST00000378725 SHOXO15266 292 aa14.82□□□□□ -0.04
SSU72-203ENST00000378725 PEX14O75381 377 aa14.82□□□□□ -0.04
SSU72-203ENST00000378725 CRYZL1O95825 349 aa14.82□□□□□ -0.04
SSU72-203ENST00000378725 HLA-DRB1P01911 266 aa14.82□□□□□ -0.04
SSU72-203ENST00000378725 AP3S2P59780 193 aa14.82□□□□□ -0.04
SSU72-203ENST00000378725 KRTAP10-3P60369 221 aa14.82□□□□□ -0.04
SSU72-203ENST00000378725 CATR1Q13166 79 aa14.82□□□□□ -0.04
SSU72-203ENST00000378725 BAK1Q16611 211 aa14.82□□□□□ -0.04
SSU72-203ENST00000378725 TOMM5Q8N4H5 51 aa14.82□□□□□ -0.04
SSU72-203ENST00000378725 WIPF2Q8TF74 440 aaPredicted RBP14.82□□□□□ -0.04
SSU72-203ENST00000378725 ZNF486Q96H40 463 aaPredicted RBP14.82□□□□□ -0.04
SSU72-203ENST00000378725 FBXL15Q9H469 300 aa14.82□□□□□ -0.04
SSU72-203ENST00000378725 AKIP1Q9NQ31 210 aa14.82□□□□□ -0.04
SSU72-203ENST00000378725 HAX1O00165 279 aa14.81□□□□□ -0.04
SSU72-203ENST00000378725 RBFOX2O43251 390 aaKnown RBP eCLIP14.81□□□□□ -0.04
SSU72-203ENST00000378725 ECI1P42126 302 aa14.81□□□□□ -0.04
SSU72-203ENST00000378725 TMEM95Q3KNT9 176 aa14.81□□□□□ -0.04
SSU72-203ENST00000378725 SCGB2B2Q4G0G5 96 aa14.81□□□□□ -0.04
SSU72-203ENST00000378725 ARSJQ5FYB0 599 aaPredicted RBP14.81□□□□□ -0.04
SSU72-203ENST00000378725 OR2B11Q5JQS5 317 aa14.81□□□□□ -0.04
SSU72-203ENST00000378725 SLC35E3Q7Z769 313 aa14.81□□□□□ -0.04
SSU72-203ENST00000378725 OR4S2Q8NH73 311 aa14.81□□□□□ -0.04
SSU72-203ENST00000378725 HARBI1Q96MB7 349 aa14.81□□□□□ -0.04
SSU72-203ENST00000378725 PRRT1Q99946 306 aa14.81□□□□□ -0.04
SSU72-203ENST00000378725 HSPB9Q9BQS6 159 aa14.81□□□□□ -0.04
SSU72-203ENST00000378725 HRASLSQ9HDD0 168 aa14.81□□□□□ -0.04
SSU72-203ENST00000378725 METTL1Q9UBP6 276 aaKnown RBP14.81□□□□□ -0.04
SSU72-203ENST00000378725 IGHV7-81A0A0B4J1V7 117 aa14.8□□□□□ -0.04
SSU72-203ENST00000378725 FCN1O00602 326 aa14.8□□□□□ -0.04
SSU72-203ENST00000378725 KCNAB3O43448 404 aa14.8□□□□□ -0.04
SSU72-203ENST00000378725 PGAM2P15259 253 aa14.8□□□□□ -0.04
SSU72-203ENST00000378725 S100GP29377 79 aa14.8□□□□□ -0.04
SSU72-203ENST00000378725 UBE2KP61086 200 aa14.8□□□□□ -0.04
SSU72-203ENST00000378725 RND3P61587 244 aa14.8□□□□□ -0.04
SSU72-203ENST00000378725 SURF2Q15527 256 aaPredicted RBP14.8□□□□□ -0.04
SSU72-203ENST00000378725 PHLDA2Q53GA4 152 aa14.8□□□□□ -0.04
SSU72-203ENST00000378725 SPAG16Q8N0X2 631 aa14.8□□□□□ -0.04
SSU72-203ENST00000378725 KLHDC1Q8N7A1 406 aa14.8□□□□□ -0.04
SSU72-203ENST00000378725 TEX45Q8NA69 505 aa14.8□□□□□ -0.04
SSU72-203ENST00000378725 OR51S1Q8NGJ8 323 aa14.8□□□□□ -0.04
SSU72-203ENST00000378725 OR13C8Q8NGS7 320 aa14.8□□□□□ -0.04
SSU72-203ENST00000378725 OR51H1Q8NH63 302 aa14.8□□□□□ -0.04
SSU72-203ENST00000378725 ZFAND1Q8TCF1 268 aa14.8□□□□□ -0.04
SSU72-203ENST00000378725 CD300LFQ8TDQ1 290 aa14.8□□□□□ -0.04
SSU72-203ENST00000378725 SLC25A17O43808 307 aa14.79□□□□□ -0.04
SSU72-203ENST00000378725 RAMP3O60896 148 aa14.79□□□□□ -0.04
SSU72-203ENST00000378725 RLN1P04808 185 aa14.79□□□□□ -0.04
SSU72-203ENST00000378725 VSIG10L2P0DP72 767 aa14.79□□□□□ -0.04
SSU72-203ENST00000378725 FAUP35544 74 aaKnown RBP14.79□□□□□ -0.04
SSU72-203ENST00000378725 SHISA2Q6UWI4 295 aa14.79□□□□□ -0.04
SSU72-203ENST00000378725 TCTEX1D1Q8N7M0 179 aa14.79□□□□□ -0.04
SSU72-203ENST00000378725 MARCH1Q8TCQ1 289 aa14.79□□□□□ -0.04
SSU72-203ENST00000378725 S100ZQ8WXG8 99 aa14.79□□□□□ -0.04
SSU72-203ENST00000378725 CITED1Q99966 193 aa14.79□□□□□ -0.04
SSU72-203ENST00000378725 SLC2A9Q9NRM0 540 aa14.79□□□□□ -0.04
SSU72-203ENST00000378725 FAM212BQ9NTI7 297 aaPredicted RBP14.79□□□□□ -0.04
SSU72-203ENST00000378725 SCP2D1Q9UJQ7 156 aa14.79□□□□□ -0.04
SSU72-203ENST00000378725 ZNF580Q9UK33 172 aa14.79□□□□□ -0.04
SSU72-203ENST00000378725 MPPED1O15442 326 aa14.78□□□□□ -0.04
SSU72-203ENST00000378725 HPRT1P00492 218 aa14.78□□□□□ -0.04
SSU72-203ENST00000378725 IGF1P05019 195 aa14.78□□□□□ -0.04
SSU72-203ENST00000378725 CTSDP07339 412 aaPredicted RBP14.78□□□□□ -0.04
SSU72-203ENST00000378725 F2RP25116 425 aa14.78□□□□□ -0.04
SSU72-203ENST00000378725 PPP5CP53041 499 aa14.78□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms