RNA–Protein interactions for RNA: ENST00000376643.6

HDAC6-204, Transcript of histone deacetylase 6, humanhuman

TSL 5

Gene HDAC6, Length 907 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-204ENST00000376643 ZNF367Q7RTV3 350 aa11.32□□□□□ -0.6
HDAC6-204ENST00000376643 OR5T1Q8NG75 326 aa11.32□□□□□ -0.6
HDAC6-204ENST00000376643 OR2K2Q8NGT1 345 aa11.32□□□□□ -0.6
HDAC6-204ENST00000376643 OR10R2Q8NGX6 335 aa11.32□□□□□ -0.6
HDAC6-204ENST00000376643 OSR1Q8TAX0 266 aaPredicted RBP11.32□□□□□ -0.6
HDAC6-204ENST00000376643 ISOC1Q96CN7 298 aa11.32□□□□□ -0.6
HDAC6-204ENST00000376643 GFI1Q99684 422 aa11.32□□□□□ -0.6
HDAC6-204ENST00000376643 TM2D3Q9BRN9 247 aa11.32□□□□□ -0.6
HDAC6-204ENST00000376643 SDHAF2Q9NX18 166 aa11.32□□□□□ -0.6
HDAC6-204ENST00000376643 COA4Q9NYJ1 87 aa11.32□□□□□ -0.6
HDAC6-204ENST00000376643 SIGLEC8Q9NYZ4 499 aa11.32□□□□□ -0.6
HDAC6-204ENST00000376643 PEF1Q9UBV8 284 aaKnown RBP11.32□□□□□ -0.6
HDAC6-204ENST00000376643 TMEM272A0A1B0GTI8 110 aa11.31□□□□□ -0.6
HDAC6-204ENST00000376643 FAM223BA6NKX1 122 aa11.31□□□□□ -0.6
HDAC6-204ENST00000376643 SCGNO76038 276 aa11.31□□□□□ -0.6
HDAC6-204ENST00000376643 OR2A4O95047 310 aa11.31□□□□□ -0.6
HDAC6-204ENST00000376643 IFNA6P05013 189 aa11.31□□□□□ -0.6
HDAC6-204ENST00000376643 CTXN2P0C2S0 81 aa11.31□□□□□ -0.6
HDAC6-204ENST00000376643 HIST1H1DP16402 221 aaKnown RBP11.31□□□□□ -0.6
HDAC6-204ENST00000376643 GALP22466 123 aa11.31□□□□□ -0.6
HDAC6-204ENST00000376643 CRHBPP24387 322 aa11.31□□□□□ -0.6
HDAC6-204ENST00000376643 AQP4P55087 323 aa11.31□□□□□ -0.6
HDAC6-204ENST00000376643 CLDN12P56749 244 aa11.31□□□□□ -0.6
HDAC6-204ENST00000376643 UBE2KP61086 200 aa11.31□□□□□ -0.6
HDAC6-204ENST00000376643 FABP5Q01469 135 aa11.31□□□□□ -0.6
HDAC6-204ENST00000376643 ARFRP1Q13795 201 aa11.31□□□□□ -0.6
HDAC6-204ENST00000376643 TBCEQ15813 527 aaPredicted RBP11.31□□□□□ -0.6
HDAC6-204ENST00000376643 ZNF343Q6P1L6 599 aa11.31□□□□□ -0.6
HDAC6-204ENST00000376643 SLC25A42Q86VD7 318 aa11.31□□□□□ -0.6
HDAC6-204ENST00000376643 FAM223AQ8IWN6 122 aa11.31□□□□□ -0.6
HDAC6-204ENST00000376643 Q8N402 240 aa11.31□□□□□ -0.6
HDAC6-204ENST00000376643 SNAPC3Q92966 411 aa11.31□□□□□ -0.6
HDAC6-204ENST00000376643 SPIN2AQ99865 258 aa11.31□□□□□ -0.6
HDAC6-204ENST00000376643 SPIN2BQ9BPZ2 258 aa11.31□□□□□ -0.6
HDAC6-204ENST00000376643 SPATA25Q9BR10 227 aa11.31□□□□□ -0.6
HDAC6-204ENST00000376643 MRPS7Q9Y2R9 242 aaKnown RBP11.31□□□□□ -0.6
HDAC6-204ENST00000376643 IFITM5A6NNB3 132 aa11.3□□□□□ -0.6
HDAC6-204ENST00000376643 TUSC2O75896 110 aa11.3□□□□□ -0.6
HDAC6-204ENST00000376643 IGLV2-23P01705 113 aa11.3□□□□□ -0.6
HDAC6-204ENST00000376643 CRYGBP07316 175 aa11.3□□□□□ -0.6
HDAC6-204ENST00000376643 OR9G9P0C7N8 305 aa11.3□□□□□ -0.6
HDAC6-204ENST00000376643 CD36P16671 472 aa11.3□□□□□ -0.6
HDAC6-204ENST00000376643 DTYMKP23919 212 aa11.3□□□□□ -0.6
HDAC6-204ENST00000376643 HES5Q5TA89 166 aa11.3□□□□□ -0.6
HDAC6-204ENST00000376643 BVESQ8NE79 360 aa11.3□□□□□ -0.6
HDAC6-204ENST00000376643 PRELID3BQ9Y3B1 194 aa11.3□□□□□ -0.6
HDAC6-204ENST00000376643 ANKRD34BA5PLL1 514 aa11.29□□□□□ -0.6
HDAC6-204ENST00000376643 MFNGO00587 321 aa11.29□□□□□ -0.6
HDAC6-204ENST00000376643 GSTT2P0CG29 244 aa11.29□□□□□ -0.6
HDAC6-204ENST00000376643 GSTT2BP0CG30 244 aa11.29□□□□□ -0.6
HDAC6-204ENST00000376643 RAB3BP20337 219 aa11.29□□□□□ -0.6
HDAC6-204ENST00000376643 MAP2K4P45985 399 aa11.29□□□□□ -0.6
HDAC6-204ENST00000376643 TNXAQ16473 311 aa11.29□□□□□ -0.6
HDAC6-204ENST00000376643 PRSS8Q16651 343 aa11.29□□□□□ -0.6
HDAC6-204ENST00000376643 IGSF11Q5DX21 431 aa11.29□□□□□ -0.6
HDAC6-204ENST00000376643 LAX1Q8IWV1 398 aa11.29□□□□□ -0.6
HDAC6-204ENST00000376643 VSTM2AQ8TAG5 236 aa11.29□□□□□ -0.6
HDAC6-204ENST00000376643 TUBA4BQ9H853 241 aa11.29□□□□□ -0.6
HDAC6-204ENST00000376643 C19orf73Q9NVV2 129 aa11.29□□□□□ -0.6
HDAC6-204ENST00000376643 MSGN1A6NI15 193 aa11.28□□□□□ -0.6
HDAC6-204ENST00000376643 MRPS14O60783 128 aaKnown RBP11.28□□□□□ -0.6
HDAC6-204ENST00000376643 CRYZL1O95825 349 aa11.28□□□□□ -0.6
HDAC6-204ENST00000376643 GNB3P16520 340 aa11.28□□□□□ -0.6
HDAC6-204ENST00000376643 DUTP33316 252 aaKnown RBP11.28□□□□□ -0.6
HDAC6-204ENST00000376643 SYNJ2BPP57105 145 aa11.28□□□□□ -0.6
HDAC6-204ENST00000376643 MMD2Q8IY49 270 aa11.28□□□□□ -0.6
HDAC6-204ENST00000376643 IL17DQ8TAD2 202 aa11.28□□□□□ -0.6
HDAC6-204ENST00000376643 SRSF12Q8WXF0 261 aaKnown RBP11.28□□□□□ -0.6
HDAC6-204ENST00000376643 ACOT12Q8WYK0 555 aa11.28□□□□□ -0.6
HDAC6-204ENST00000376643 NDUFB11Q9NX14 153 aa11.28□□□□□ -0.6
HDAC6-204ENST00000376643 KCNK7Q9Y2U2 307 aa11.28□□□□□ -0.6
HDAC6-204ENST00000376643 A0A075B6Q4 140 aa11.27□□□□□ -0.61
HDAC6-204ENST00000376643 TRDV1A0A1B0GX56 115 aa11.27□□□□□ -0.61
HDAC6-204ENST00000376643 RAB27BO00194 218 aa11.27□□□□□ -0.61
HDAC6-204ENST00000376643 LINC00205P59089 165 aa11.27□□□□□ -0.61
HDAC6-204ENST00000376643 SSBP2P81877 361 aaPredicted RBP11.27□□□□□ -0.61
HDAC6-204ENST00000376643 ATP5G2Q06055 141 aa11.27□□□□□ -0.61
HDAC6-204ENST00000376643 PJVKQ0ZLH3 352 aa11.27□□□□□ -0.61
HDAC6-204ENST00000376643 CDK10Q15131 360 aa11.27□□□□□ -0.61
HDAC6-204ENST00000376643 H1FOOQ8IZA3 346 aaPredicted RBP11.27□□□□□ -0.61
HDAC6-204ENST00000376643 Q8N1Y9 231 aa11.27□□□□□ -0.61
HDAC6-204ENST00000376643 ZNF645Q8N7E2 425 aa11.27□□□□□ -0.61
HDAC6-204ENST00000376643 ADAD2Q8NCV1 583 aaKnown RBP11.27□□□□□ -0.61
HDAC6-204ENST00000376643 DDB2Q92466 427 aa11.27□□□□□ -0.61
HDAC6-204ENST00000376643 DCUN1D5Q9BTE7 237 aa11.27□□□□□ -0.61
HDAC6-204ENST00000376643 DCSTAMPQ9H295 470 aa11.27□□□□□ -0.61
HDAC6-204ENST00000376643 DHFRP00374 187 aa11.26□□□□□ -0.61
HDAC6-204ENST00000376643 DYRK1AQ13627 763 aa11.26□□□□□ -0.61
HDAC6-204ENST00000376643 NECAP1Q8NC96 275 aa11.26□□□□□ -0.61
HDAC6-204ENST00000376643 KCTD12Q96CX2 325 aaKnown RBP11.26□□□□□ -0.61
HDAC6-204ENST00000376643 AIFM2Q9BRQ8 373 aa11.26□□□□□ -0.61
HDAC6-204ENST00000376643 ATG5Q9H1Y0 275 aa11.26□□□□□ -0.61
HDAC6-204ENST00000376643 SLC2A8Q9NY64 477 aa11.26□□□□□ -0.61
HDAC6-204ENST00000376643 SHISA3A0PJX4 238 aa11.25□□□□□ -0.61
HDAC6-204ENST00000376643 SRRM4A7MD48 611 aaKnown RBP11.25□□□□□ -0.61
HDAC6-204ENST00000376643 RHOGP84095 191 aa11.25□□□□□ -0.61
HDAC6-204ENST00000376643 EXOSC2Q13868 293 aaKnown RBP11.25□□□□□ -0.61
HDAC6-204ENST00000376643 KCTD9Q7L273 389 aa11.25□□□□□ -0.61
HDAC6-204ENST00000376643 HAPLN4Q86UW8 402 aa11.25□□□□□ -0.61
HDAC6-204ENST00000376643 OR4S2Q8NH73 311 aa11.25□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms