RNA–Protein interactions for RNA: ENST00000375315.6

C9orf3-203, Transcript of chromosome 9 open reading frame 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene C9orf3, Length 3,136 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-203ENST00000375315 TOX4O94842 621 aa10.29□□□□□ -0.76
C9orf3-203ENST00000375315 HOXC12P31275 282 aa10.29□□□□□ -0.76
C9orf3-203ENST00000375315 RSPO4Q2I0M5 234 aaPredicted RBP10.29□□□□□ -0.76
C9orf3-203ENST00000375315 C20orf196Q8IYI0 205 aa10.29□□□□□ -0.76
C9orf3-203ENST00000375315 RPP25LQ8N5L8 163 aaKnown RBP10.29□□□□□ -0.76
C9orf3-203ENST00000375315 ZNF596Q8TC21 504 aa10.29□□□□□ -0.76
C9orf3-203ENST00000375315 WDR61Q9GZS3 305 aaKnown RBP10.29□□□□□ -0.76
C9orf3-203ENST00000375315 ZNF430Q9H8G1 570 aaPredicted RBP10.29□□□□□ -0.76
C9orf3-203ENST00000375315 TBL2Q9Y4P3 447 aaKnown RBP10.29□□□□□ -0.76
C9orf3-203ENST00000375315 AQP7P3A6NL99 342 aa10.29□□□□□ -0.76
C9orf3-203ENST00000375315 KLK10O43240 276 aa10.29□□□□□ -0.76
C9orf3-203ENST00000375315 C16orf54Q6UWD8 224 aa10.29□□□□□ -0.76
C9orf3-203ENST00000375315 PNPLA5Q7Z6Z6 429 aaPredicted RBP10.29□□□□□ -0.76
C9orf3-203ENST00000375315 SAXO1Q8IYX7 474 aa10.29□□□□□ -0.76
C9orf3-203ENST00000375315 SGCZQ96LD1 299 aa10.29□□□□□ -0.76
C9orf3-203ENST00000375315 NRN1Q9NPD7 142 aa10.29□□□□□ -0.76
C9orf3-203ENST00000375315 CPAMD8Q8IZJ3 1885 aa10.28□□□□□ -0.76
C9orf3-203ENST00000375315 HMGB3O15347 200 aaKnown RBP10.28□□□□□ -0.76
C9orf3-203ENST00000375315 FAHP16930 419 aa10.28□□□□□ -0.76
C9orf3-203ENST00000375315 KITLGP21583 273 aa10.28□□□□□ -0.76
C9orf3-203ENST00000375315 CBLN1P23435 193 aa10.28□□□□□ -0.76
C9orf3-203ENST00000375315 AMTP48728 403 aa10.28□□□□□ -0.76
C9orf3-203ENST00000375315 CLRN1P58418 232 aa10.28□□□□□ -0.76
C9orf3-203ENST00000375315 GRB2P62993 217 aaKnown RBP10.28□□□□□ -0.76
C9orf3-203ENST00000375315 OR8B8Q15620 311 aa10.28□□□□□ -0.76
C9orf3-203ENST00000375315 SNAI3Q3KNW1 292 aa10.28□□□□□ -0.76
C9orf3-203ENST00000375315 SLC25A22Q9H936 323 aa10.28□□□□□ -0.76
C9orf3-203ENST00000375315 TAAR3PQ9P1P4 343 aa10.28□□□□□ -0.76
C9orf3-203ENST00000375315 PIGBOS1A0A0B4J2F0 54 aa10.28□□□□□ -0.76
C9orf3-203ENST00000375315 SH2D1BO14796 132 aa10.28□□□□□ -0.76
C9orf3-203ENST00000375315 PAGE4O60829 102 aa10.28□□□□□ -0.76
C9orf3-203ENST00000375315 NEURL1O76050 574 aa10.28□□□□□ -0.76
C9orf3-203ENST00000375315 WISP2O76076 250 aa10.28□□□□□ -0.76
C9orf3-203ENST00000375315 MRPL27Q9P0M9 148 aaKnown RBP10.28□□□□□ -0.76
C9orf3-203ENST00000375315 SH3BGRL2Q9UJC5 107 aa10.28□□□□□ -0.76
C9orf3-203ENST00000375315 TRAV9-1A0A075B6T8 112 aa10.27□□□□□ -0.76
C9orf3-203ENST00000375315 IGLC7A0M8Q6 106 aa10.27□□□□□ -0.76
C9orf3-203ENST00000375315 TMPRSS2O15393 492 aa10.27□□□□□ -0.76
C9orf3-203ENST00000375315 DHRS3O75911 302 aa10.27□□□□□ -0.76
C9orf3-203ENST00000375315 NBEAP1P0C6P0 100 aa10.27□□□□□ -0.76
C9orf3-203ENST00000375315 PSG1P11464 419 aa10.27□□□□□ -0.76
C9orf3-203ENST00000375315 DSCR4P56555 118 aaPredicted RBP10.27□□□□□ -0.76
C9orf3-203ENST00000375315 FDCSPQ8NFU4 85 aa10.27□□□□□ -0.76
C9orf3-203ENST00000375315 TAF15Q92804 592 aaKnown RBP eCLIP10.27□□□□□ -0.761e-6■■■■□ 22
C9orf3-203ENST00000375315 SFRP2Q96HF1 295 aa10.27□□□□□ -0.76
C9orf3-203ENST00000375315 GMPPAQ96IJ6 420 aaPredicted RBP10.27□□□□□ -0.76
C9orf3-203ENST00000375315 PSENENQ9NZ42 101 aa10.27□□□□□ -0.76
C9orf3-203ENST00000375315 ABI3Q9P2A4 366 aa10.27□□□□□ -0.76
C9orf3-203ENST00000375315 COL6A6A6NMZ7 2263 aa10.27□□□□□ -0.77
C9orf3-203ENST00000375315 DPRXA6NFQ7 191 aa10.27□□□□□ -0.77
C9orf3-203ENST00000375315 C1QTNF9BB2RNN3 333 aa10.27□□□□□ -0.77
C9orf3-203ENST00000375315 RER1O15258 196 aa10.27□□□□□ -0.77
C9orf3-203ENST00000375315 TRAF3IP2O43734 574 aaPredicted RBP10.27□□□□□ -0.77
C9orf3-203ENST00000375315 NBL1P41271 181 aa10.27□□□□□ -0.77
C9orf3-203ENST00000375315 ARF6P62330 175 aa10.27□□□□□ -0.77
C9orf3-203ENST00000375315 ZNF90Q03938 601 aa10.27□□□□□ -0.77
C9orf3-203ENST00000375315 OR4A47Q6IF82 309 aa10.27□□□□□ -0.77
C9orf3-203ENST00000375315 NIT1Q86X76 327 aa10.27□□□□□ -0.77
C9orf3-203ENST00000375315 FER1L6-AS2Q96M78 137 aa10.27□□□□□ -0.77
C9orf3-203ENST00000375315 SRXN1Q9BYN0 137 aa10.27□□□□□ -0.77
C9orf3-203ENST00000375315 RNF114Q9Y508 228 aa10.27□□□□□ -0.77
C9orf3-203ENST00000375315 TIMM9Q9Y5J7 89 aa10.27□□□□□ -0.77
C9orf3-203ENST00000375315 TLN1Q9Y490 2541 aaKnown RBP10.27□□□□□ -0.77
C9orf3-203ENST00000375315 PRR14LQ5THK1 2151 aa10.27□□□□□ -0.77
C9orf3-203ENST00000375315 C11orf94C9JXX5 98 aa10.27□□□□□ -0.77
C9orf3-203ENST00000375315 NPIPA2E9PIF3 369 aa10.27□□□□□ -0.77
C9orf3-203ENST00000375315 NPIPA3F8WFD2 350 aa10.27□□□□□ -0.77
C9orf3-203ENST00000375315 LHFPL4Q7Z7J7 247 aa10.27□□□□□ -0.77
C9orf3-203ENST00000375315 FADS6Q8N9I5 356 aa10.27□□□□□ -0.77
C9orf3-203ENST00000375315 OR5D13Q8NGL4 314 aa10.27□□□□□ -0.77
C9orf3-203ENST00000375315 GATAD1Q8WUU5 269 aa10.27□□□□□ -0.77
C9orf3-203ENST00000375315 OR5P3Q8WZ94 311 aa10.27□□□□□ -0.77
C9orf3-203ENST00000375315 SLC7A10Q9NS82 523 aa10.27□□□□□ -0.77
C9orf3-203ENST00000375315 PIGLQ9Y2B2 252 aa10.27□□□□□ -0.77
C9orf3-203ENST00000375315 SPENQ96T58 3664 aaKnown RBP10.26□□□□□ -0.77
C9orf3-203ENST00000375315 FCN1O00602 326 aa10.26□□□□□ -0.77
C9orf3-203ENST00000375315 ANGPTL7O43827 346 aa10.26□□□□□ -0.77
C9orf3-203ENST00000375315 C1QTNF9P0C862 333 aa10.26□□□□□ -0.77
C9orf3-203ENST00000375315 ANOS1P23352 680 aa10.26□□□□□ -0.77
C9orf3-203ENST00000375315 SUMO3P55854 103 aaPredicted RBP10.26□□□□□ -0.77
C9orf3-203ENST00000375315 CLDN18P56856 261 aa10.26□□□□□ -0.77
C9orf3-203ENST00000375315 HLA-DRB5Q30154 266 aa10.26□□□□□ -0.77
C9orf3-203ENST00000375315 LRRC10Q5BKY1 277 aa10.26□□□□□ -0.77
C9orf3-203ENST00000375315 OR4C12Q96R67 309 aa10.26□□□□□ -0.77
C9orf3-203ENST00000375315 ZZEF1O43149 2961 aa10.26□□□□□ -0.77
C9orf3-203ENST00000375315 PDE6DO43924 150 aa10.26□□□□□ -0.77
C9orf3-203ENST00000375315 IGKV1D-33P01593 117 aa10.26□□□□□ -0.77
C9orf3-203ENST00000375315 IGKV1-33P01594 117 aa10.26□□□□□ -0.77
C9orf3-203ENST00000375315 PRSS12P56730 875 aa10.26□□□□□ -0.77
C9orf3-203ENST00000375315 ARL16Q0P5N6 197 aa10.26□□□□□ -0.77
C9orf3-203ENST00000375315 PMCHL1Q16048 86 aa10.26□□□□□ -0.77
C9orf3-203ENST00000375315 BRICD5Q6PL45 260 aa10.26□□□□□ -0.77
C9orf3-203ENST00000375315 GAPTQ8N292 157 aa10.26□□□□□ -0.77
C9orf3-203ENST00000375315 OR2M7Q8NG81 312 aa10.26□□□□□ -0.77
C9orf3-203ENST00000375315 LYZL4Q96KX0 146 aa10.26□□□□□ -0.77
C9orf3-203ENST00000375315 SHANK1Q9Y566 2161 aa10.25□□□□□ -0.77
C9orf3-203ENST00000375315 UBE2L5PA0A1B0GUS4 154 aa10.25□□□□□ -0.77
C9orf3-203ENST00000375315 ZNF891A8MT65 544 aaPredicted RBP10.25□□□□□ -0.77
C9orf3-203ENST00000375315 SYNGR2O43760 224 aa10.25□□□□□ -0.77
C9orf3-203ENST00000375315 PATE4P0C8F1 98 aa10.25□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms