RNA–Protein interactions for RNA: ENST00000368436.1

CKS1B-202, Transcript of CDC28 protein kinase regulatory subunit 1B, humanhuman

TSL 2 BASIC

Gene CKS1B, Length 820 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKS1B-202ENST00000368436 MRPS15P82914 257 aaKnown RBP12.21□□□□□ -0.45
CKS1B-202ENST00000368436 DYRK1AQ13627 763 aa12.21□□□□□ -0.45
CKS1B-202ENST00000368436 PRSS48Q7RTY5 328 aa12.21□□□□□ -0.45
CKS1B-202ENST00000368436 TEX45Q8NA69 505 aa12.21□□□□□ -0.45
CKS1B-202ENST00000368436 OR10R2Q8NGX6 335 aa12.21□□□□□ -0.45
CKS1B-202ENST00000368436 DDB2Q92466 427 aa12.21□□□□□ -0.45
CKS1B-202ENST00000368436 USMG5Q96IX5 58 aa12.21□□□□□ -0.45
CKS1B-202ENST00000368436 THAP7Q9BT49 309 aaPredicted RBP12.21□□□□□ -0.45
CKS1B-202ENST00000368436 SIGLEC8Q9NYZ4 499 aa12.21□□□□□ -0.45
CKS1B-202ENST00000368436 TNCP24821 2201 aa12.21□□□□□ -0.46
CKS1B-202ENST00000368436 RAB27BO00194 218 aa12.2□□□□□ -0.46
CKS1B-202ENST00000368436 CSN3P07498 182 aa12.2□□□□□ -0.46
CKS1B-202ENST00000368436 CRHBPP24387 322 aa12.2□□□□□ -0.46
CKS1B-202ENST00000368436 SYNJ2BPP57105 145 aa12.2□□□□□ -0.46
CKS1B-202ENST00000368436 CBX3Q13185 183 aa12.2□□□□□ -0.46
CKS1B-202ENST00000368436 RTL8BQ17RB0 113 aa12.2□□□□□ -0.46
CKS1B-202ENST00000368436 Q6ZS49 121 aa12.2□□□□□ -0.46
CKS1B-202ENST00000368436 ADAD2Q8NCV1 583 aaKnown RBP12.2□□□□□ -0.46
CKS1B-202ENST00000368436 NRG4Q8WWG1 115 aa12.2□□□□□ -0.46
CKS1B-202ENST00000368436 PALMDQ9NP74 551 aa12.2□□□□□ -0.46
CKS1B-202ENST00000368436 ADAM30Q9UKF2 790 aa12.2□□□□□ -0.46
CKS1B-202ENST00000368436 CSMD3Q7Z407 3707 aa12.19□□□□□ -0.46
CKS1B-202ENST00000368436 TRAV1-2A0A0B4J238 106 aa12.19□□□□□ -0.46
CKS1B-202ENST00000368436 LCE6AA0A183 80 aa12.19□□□□□ -0.46
CKS1B-202ENST00000368436 MSGN1A6NI15 193 aa12.19□□□□□ -0.46
CKS1B-202ENST00000368436 PDCD5O14737 125 aa12.19□□□□□ -0.46
CKS1B-202ENST00000368436 RBMXL2O75526 392 aaKnown RBP12.19□□□□□ -0.46
CKS1B-202ENST00000368436 TRBV12-3P01733 135 aa12.19□□□□□ -0.46
CKS1B-202ENST00000368436 GNB3P16520 340 aa12.19□□□□□ -0.46
CKS1B-202ENST00000368436 RAB6AP20340 208 aa12.19□□□□□ -0.46
CKS1B-202ENST00000368436 GADD45AP24522 165 aa12.19□□□□□ -0.46
CKS1B-202ENST00000368436 DUTP33316 252 aaKnown RBP12.19□□□□□ -0.46
CKS1B-202ENST00000368436 MAP2K4P45985 399 aa12.19□□□□□ -0.46
CKS1B-202ENST00000368436 MECP2P51608 486 aaKnown RBP12.19□□□□□ -0.46
CKS1B-202ENST00000368436 UBE2KP61086 200 aa12.19□□□□□ -0.46
CKS1B-202ENST00000368436 DEFA5Q01523 94 aa12.19□□□□□ -0.46
CKS1B-202ENST00000368436 PRSS8Q16651 343 aa12.19□□□□□ -0.46
CKS1B-202ENST00000368436 TATDN3Q17R31 274 aa12.19□□□□□ -0.46
CKS1B-202ENST00000368436 MAFIPQ8WZ33 124 aa12.19□□□□□ -0.46
CKS1B-202ENST00000368436 ADTRPQ96IZ2 230 aa12.19□□□□□ -0.46
CKS1B-202ENST00000368436 CENPOQ9BU64 300 aa12.19□□□□□ -0.46
CKS1B-202ENST00000368436 CCDC90BQ9GZT6 254 aa12.19□□□□□ -0.46
CKS1B-202ENST00000368436 COA4Q9NYJ1 87 aa12.19□□□□□ -0.46
CKS1B-202ENST00000368436 ZNF230Q9UIE0 474 aaPredicted RBP12.19□□□□□ -0.46
CKS1B-202ENST00000368436 SHISA3A0PJX4 238 aa12.18□□□□□ -0.46
CKS1B-202ENST00000368436 ERICH4A6NGS2 130 aa12.18□□□□□ -0.46
CKS1B-202ENST00000368436 IFITM5A6NNB3 132 aa12.18□□□□□ -0.46
CKS1B-202ENST00000368436 OR9G9P0C7N8 305 aa12.18□□□□□ -0.46
CKS1B-202ENST00000368436 HIST1H1DP16402 221 aaKnown RBP12.18□□□□□ -0.46
CKS1B-202ENST00000368436 OR10A3P58181 314 aa12.18□□□□□ -0.46
CKS1B-202ENST00000368436 HAGHQ16775 308 aa12.18□□□□□ -0.46
CKS1B-202ENST00000368436 VMA21Q3ZAQ7 101 aa12.18□□□□□ -0.46
CKS1B-202ENST00000368436 H1FOOQ8IZA3 346 aaPredicted RBP12.18□□□□□ -0.46
CKS1B-202ENST00000368436 ISOC1Q96CN7 298 aa12.18□□□□□ -0.46
CKS1B-202ENST00000368436 PHB2Q99623 299 aa12.18□□□□□ -0.46
CKS1B-202ENST00000368436 SPATA25Q9BR10 227 aa12.18□□□□□ -0.46
CKS1B-202ENST00000368436 IGKV1D-8A0A087WSZ0 117 aa12.17□□□□□ -0.46
CKS1B-202ENST00000368436 LINC00473A8K010 186 aa12.17□□□□□ -0.46
CKS1B-202ENST00000368436 ANKRD65E5RJM6 399 aa12.17□□□□□ -0.46
CKS1B-202ENST00000368436 OR2A4O95047 310 aa12.17□□□□□ -0.46
CKS1B-202ENST00000368436 APELAP0DMC3 54 aa12.17□□□□□ -0.46
CKS1B-202ENST00000368436 SSX1Q16384 188 aa12.17□□□□□ -0.46
CKS1B-202ENST00000368436 TNXAQ16473 311 aa12.17□□□□□ -0.46
CKS1B-202ENST00000368436 RPEL1Q2QD12 228 aa12.17□□□□□ -0.46
CKS1B-202ENST00000368436 ZFAND6Q6FIF0 208 aa12.17□□□□□ -0.46
CKS1B-202ENST00000368436 LCN12Q6JVE5 192 aa12.17□□□□□ -0.46
CKS1B-202ENST00000368436 Q8N402 240 aa12.17□□□□□ -0.46
CKS1B-202ENST00000368436 OSR1Q8TAX0 266 aaPredicted RBP12.17□□□□□ -0.46
CKS1B-202ENST00000368436 SRSF12Q8WXF0 261 aaKnown RBP12.17□□□□□ -0.46
CKS1B-202ENST00000368436 SNAPC3Q92966 411 aa12.17□□□□□ -0.46
CKS1B-202ENST00000368436 GINS4Q9BRT9 223 aa12.17□□□□□ -0.46
CKS1B-202ENST00000368436 RBM7Q9Y580 266 aaKnown RBP12.17□□□□□ -0.46
CKS1B-202ENST00000368436 DNAH1Q9P2D7 4330 aa12.17□□□□□ -0.46
CKS1B-202ENST00000368436 STARD9Q9P2P6 4700 aa12.17□□□□□ -0.46
CKS1B-202ENST00000368436 LYSTQ99698 3801 aa12.17□□□□□ -0.46
CKS1B-202ENST00000368436 A0A075B6Q4 140 aa12.16□□□□□ -0.46
CKS1B-202ENST00000368436 TRBV9A0A0B4J1U6 114 aa12.16□□□□□ -0.46
CKS1B-202ENST00000368436 IZUMO1RA6ND01 250 aa12.16□□□□□ -0.46
CKS1B-202ENST00000368436 CRYZL1O95825 349 aa12.16□□□□□ -0.46
CKS1B-202ENST00000368436 ZNF45Q02386 682 aa12.16□□□□□ -0.46
CKS1B-202ENST00000368436 ARFRP1Q13795 201 aa12.16□□□□□ -0.46
CKS1B-202ENST00000368436 TBCEQ15813 527 aaPredicted RBP12.16□□□□□ -0.46
CKS1B-202ENST00000368436 IDO2Q6ZQW0 420 aa12.16□□□□□ -0.46
CKS1B-202ENST00000368436 GTSCR1Q86UQ5 136 aa12.16□□□□□ -0.46
CKS1B-202ENST00000368436 OR2K2Q8NGT1 345 aa12.16□□□□□ -0.46
CKS1B-202ENST00000368436 AKIP1Q9NQ31 210 aa12.16□□□□□ -0.46
CKS1B-202ENST00000368436 GAR1Q9NY12 217 aaKnown RBP12.16□□□□□ -0.46
CKS1B-202ENST00000368436 TRDV1A0A1B0GX56 115 aa12.15□□□□□ -0.46
CKS1B-202ENST00000368436 METTL21EPA6NDL7 271 aa12.15□□□□□ -0.46
CKS1B-202ENST00000368436 FAM223BA6NKX1 122 aa12.15□□□□□ -0.46
CKS1B-202ENST00000368436 AIREO43918 545 aa12.15□□□□□ -0.46
CKS1B-202ENST00000368436 TALDO1P37837 337 aa12.15□□□□□ -0.46
CKS1B-202ENST00000368436 ZNF367Q7RTV3 350 aa12.15□□□□□ -0.46
CKS1B-202ENST00000368436 FAM223AQ8IWN6 122 aa12.15□□□□□ -0.46
CKS1B-202ENST00000368436 ACOT12Q8WYK0 555 aa12.15□□□□□ -0.46
CKS1B-202ENST00000368436 ZNF430Q9H8G1 570 aaPredicted RBP12.15□□□□□ -0.46
CKS1B-202ENST00000368436 NDUFB11Q9NX14 153 aa12.15□□□□□ -0.46
CKS1B-202ENST00000368436 PEMTQ9UBM1 199 aa12.15□□□□□ -0.46
CKS1B-202ENST00000368436 A0A0B4J203 849 aa12.14□□□□□ -0.47
CKS1B-202ENST00000368436 BMPR1BO00238 502 aa12.14□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms