RNA–Protein interactions for RNA: ENST00000367042.5

CD46-208, Transcript of CD46 molecule, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CD46, Length 3,326 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD46-208ENST00000367042 ACTL6BO94805 426 aa6.88□□□□□ -1.31
CD46-208ENST00000367042 IGLV2-14P01704 120 aa6.88□□□□□ -1.31
CD46-208ENST00000367042 HBZP02008 142 aa6.88□□□□□ -1.31
CD46-208ENST00000367042 CCKARP32238 428 aa6.88□□□□□ -1.31
CD46-208ENST00000367042 TSPAN7P41732 249 aa6.88□□□□□ -1.31
CD46-208ENST00000367042 DUSP3P51452 185 aaPredicted RBP6.88□□□□□ -1.31
CD46-208ENST00000367042 SPCS3P61009 180 aa6.88□□□□□ -1.31
CD46-208ENST00000367042 SLC35B1P78383 322 aa6.88□□□□□ -1.31
CD46-208ENST00000367042 TMEM14EPQ6UXP3 125 aa6.88□□□□□ -1.31
CD46-208ENST00000367042 LINC00596Q86U02 117 aa6.88□□□□□ -1.31
CD46-208ENST00000367042 CISD2Q8N5K1 135 aaKnown RBP6.88□□□□□ -1.31
CD46-208ENST00000367042 OR4A16Q8NH70 328 aa6.88□□□□□ -1.31
CD46-208ENST00000367042 VN1R17PQ8TDU5 208 aa6.88□□□□□ -1.31
CD46-208ENST00000367042 PRDM6Q9NQX0 595 aa6.88□□□□□ -1.31
CD46-208ENST00000367042 TMEM30CPA0ZSE6 113 aa6.88□□□□□ -1.31
CD46-208ENST00000367042 A6NNC1 897 aa6.88□□□□□ -1.31
CD46-208ENST00000367042 C12orf77C9JDV5 145 aa6.88□□□□□ -1.31
CD46-208ENST00000367042 K7ESF4 209 aa6.88□□□□□ -1.31
CD46-208ENST00000367042 SLC17A3O00476 420 aa6.88□□□□□ -1.31
CD46-208ENST00000367042 GFRA1P56159 465 aa6.88□□□□□ -1.31
CD46-208ENST00000367042 NUTF2P61970 127 aaKnown RBP6.88□□□□□ -1.31
CD46-208ENST00000367042 SRSF7Q16629 238 aaKnown RBP eCLIP6.88□□□□□ -1.31
CD46-208ENST00000367042 KRTAP27-1Q3LI81 207 aa6.88□□□□□ -1.31
CD46-208ENST00000367042 C6orf15Q6UXA7 325 aaPredicted RBP6.88□□□□□ -1.31
CD46-208ENST00000367042 ZNF645Q8N7E2 425 aa6.88□□□□□ -1.31
CD46-208ENST00000367042 WDYHV1Q96HA8 205 aa6.88□□□□□ -1.31
CD46-208ENST00000367042 FAM173AQ9BQD7 235 aa6.88□□□□□ -1.31
CD46-208ENST00000367042 SNHG12Q9BXW3 62 aa6.88□□□□□ -1.31
CD46-208ENST00000367042 TP53TG5Q9Y2B4 290 aa6.88□□□□□ -1.31
CD46-208ENST00000367042 LOXL2Q9Y4K0 774 aa6.88□□□□□ -1.31
CD46-208ENST00000367042 NCKAP5O14513 1909 aa6.88□□□□□ -1.31
CD46-208ENST00000367042 PSPNO60542 156 aa6.88□□□□□ -1.31
CD46-208ENST00000367042 CD1BP29016 333 aa6.88□□□□□ -1.31
CD46-208ENST00000367042 SRP14P37108 136 aaKnown RBP6.88□□□□□ -1.31
CD46-208ENST00000367042 FABP6P51161 128 aa6.88□□□□□ -1.31
CD46-208ENST00000367042 KRTDAPP60985 99 aa6.88□□□□□ -1.31
CD46-208ENST00000367042 GNB1P62873 340 aa6.88□□□□□ -1.31
CD46-208ENST00000367042 HTD2P86397 168 aa6.88□□□□□ -1.31
CD46-208ENST00000367042 ATP6V1FQ16864 119 aa6.88□□□□□ -1.31
CD46-208ENST00000367042 ACTL10Q5JWF8 245 aa6.88□□□□□ -1.31
CD46-208ENST00000367042 MIC13Q5XKP0 118 aa6.88□□□□□ -1.31
CD46-208ENST00000367042 ZNF497Q6ZNH5 498 aa6.88□□□□□ -1.31
CD46-208ENST00000367042 CNEP1R1Q8N9A8 125 aa6.88□□□□□ -1.31
CD46-208ENST00000367042 CIB3Q96Q77 187 aaPredicted RBP6.88□□□□□ -1.31
CD46-208ENST00000367042 DCTN5Q9BTE1 182 aa6.88□□□□□ -1.31
CD46-208ENST00000367042 QTRT1Q9BXR0 403 aaKnown RBP6.88□□□□□ -1.31
CD46-208ENST00000367042 TTTY12Q9BZ98 90 aa6.88□□□□□ -1.31
CD46-208ENST00000367042 MUC3AQ02505 3323 aa6.87□□□□□ -1.31
CD46-208ENST00000367042 MED13Q9UHV7 2174 aa6.87□□□□□ -1.31
CD46-208ENST00000367042 MARCH11A6NNE9 402 aa6.87□□□□□ -1.31
CD46-208ENST00000367042 MKRN2OSH3BPM6 223 aa6.87□□□□□ -1.31
CD46-208ENST00000367042 ARL14EPLP0DKL9 152 aa6.87□□□□□ -1.31
CD46-208ENST00000367042 LHX2P50458 406 aa6.87□□□□□ -1.31
CD46-208ENST00000367042 C21orf62-AS1Q17RA5 79 aa6.87□□□□□ -1.31
CD46-208ENST00000367042 LBHQ53QV2 105 aaPredicted RBP6.87□□□□□ -1.31
CD46-208ENST00000367042 Q6P435 159 aa6.87□□□□□ -1.31
CD46-208ENST00000367042 LINC01551Q86U37 167 aa6.87□□□□□ -1.31
CD46-208ENST00000367042 ZNF114Q8NC26 417 aa6.87□□□□□ -1.31
CD46-208ENST00000367042 Q8NFD4 153 aa6.87□□□□□ -1.31
CD46-208ENST00000367042 SLC25A40Q8TBP6 338 aa6.87□□□□□ -1.31
CD46-208ENST00000367042 SERTAD4Q9NUC0 356 aa6.87□□□□□ -1.31
CD46-208ENST00000367042 COL6A3P12111 3177 aa6.87□□□□□ -1.31
CD46-208ENST00000367042 TMEM265A0A087WTH1 108 aa6.87□□□□□ -1.31
CD46-208ENST00000367042 SCO2A0A1W2PP80 73 aa6.87□□□□□ -1.31
CD46-208ENST00000367042 FCN1O00602 326 aa6.87□□□□□ -1.31
CD46-208ENST00000367042 NUPR1O60356 82 aa6.87□□□□□ -1.31
CD46-208ENST00000367042 CRISP2P16562 243 aa6.87□□□□□ -1.31
CD46-208ENST00000367042 HOXC12P31275 282 aa6.87□□□□□ -1.31
CD46-208ENST00000367042 ADMP35318 185 aa6.87□□□□□ -1.31
CD46-208ENST00000367042 IER3P46695 156 aa6.87□□□□□ -1.31
CD46-208ENST00000367042 GPR12P47775 334 aa6.87□□□□□ -1.31
CD46-208ENST00000367042 TCL1AP56279 114 aa6.87□□□□□ -1.31
CD46-208ENST00000367042 DBX2Q6ZNG2 339 aa6.87□□□□□ -1.31
CD46-208ENST00000367042 GBGT1Q8N5D6 347 aa6.87□□□□□ -1.31
CD46-208ENST00000367042 TMEM251Q8N6I4 163 aa6.87□□□□□ -1.31
CD46-208ENST00000367042 RNASEH2CQ8TDP1 164 aaKnown RBP6.87□□□□□ -1.31
CD46-208ENST00000367042 R3HDM4Q96D70 268 aa6.87□□□□□ -1.31
CD46-208ENST00000367042 SFRP2Q96HF1 295 aa6.87□□□□□ -1.31
CD46-208ENST00000367042 HSPB9Q9BQS6 159 aa6.87□□□□□ -1.31
CD46-208ENST00000367042 IER2Q9BTL4 223 aa6.87□□□□□ -1.31
CD46-208ENST00000367042 MRPL37Q9BZE1 423 aaKnown RBP6.87□□□□□ -1.31
CD46-208ENST00000367042 TUBG2Q9NRH3 451 aa6.87□□□□□ -1.31
CD46-208ENST00000367042 HSPB7Q9UBY9 170 aa6.87□□□□□ -1.31
CD46-208ENST00000367042 HEATR1Q9H583 2144 aaKnown RBP6.87□□□□□ -1.31
CD46-208ENST00000367042 FAM90A26D6RGX4 464 aa6.86□□□□□ -1.31
CD46-208ENST00000367042 TIMM8AO60220 97 aaPredicted RBP6.86□□□□□ -1.31
CD46-208ENST00000367042 NPPCP23582 126 aa6.86□□□□□ -1.31
CD46-208ENST00000367042 OR10J1P30954 320 aa6.86□□□□□ -1.31
CD46-208ENST00000367042 CLDN18P56856 261 aa6.86□□□□□ -1.31
CD46-208ENST00000367042 ERVFC1-1P60608 527 aa6.86□□□□□ -1.31
CD46-208ENST00000367042 ERVK-16P61578 105 aa6.86□□□□□ -1.31
CD46-208ENST00000367042 SP5Q6BEB4 398 aaPredicted RBP6.86□□□□□ -1.31
CD46-208ENST00000367042 TIPARPQ7Z3E1 657 aaKnown RBP6.86□□□□□ -1.31
CD46-208ENST00000367042 OR10G8Q8NGN5 311 aa6.86□□□□□ -1.31
CD46-208ENST00000367042 AGMATQ9BSE5 352 aa6.86□□□□□ -1.31
CD46-208ENST00000367042 PKIBQ9C010 78 aa6.86□□□□□ -1.31
CD46-208ENST00000367042 HIPK2Q9H2X6 1198 aa6.86□□□□□ -1.31
CD46-208ENST00000367042 ZNF703Q9H7S9 590 aaPredicted RBP6.86□□□□□ -1.31
CD46-208ENST00000367042 TIMM9Q9Y5J7 89 aa6.86□□□□□ -1.31
CD46-208ENST00000367042 DSPP15924 2871 aaKnown RBP6.86□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 44.1 ms