RNA–Protein interactions for RNA: ENST00000361804.4

SMC3-201, Transcript of structural maintenance of chromosomes 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMC3, Length 4,114 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC3-201ENST00000361804 TRA2AQ13595 282 aaKnown RBP eCLIP8.84□□□□□ -0.995e-6■■□□□ 11.4
SMC3-201ENST00000361804 DCAF10Q5QP82 559 aa8.84□□□□□ -0.99
SMC3-201ENST00000361804 ASPHD1Q5U4P2 390 aa8.84□□□□□ -0.99
SMC3-201ENST00000361804 COQ2Q96H96 371 aa8.84□□□□□ -0.99
SMC3-201ENST00000361804 QTRT1Q9BXR0 403 aaKnown RBP8.84□□□□□ -0.99
SMC3-201ENST00000361804 NPCDR1Q9BY65 106 aa8.84□□□□□ -0.99
SMC3-201ENST00000361804 GP6Q9HCN6 339 aa8.84□□□□□ -0.99
SMC3-201ENST00000361804 CRYBG3Q68DQ2 2970 aa8.84□□□□□ -0.99
SMC3-201ENST00000361804 LRRC30A6NM36 301 aa8.84□□□□□ -0.99
SMC3-201ENST00000361804 MLNRO43193 412 aa8.84□□□□□ -0.99
SMC3-201ENST00000361804 FRMD6-AS1P0C7T7 363 aa8.84□□□□□ -0.99
SMC3-201ENST00000361804 ARG2P78540 354 aa8.84□□□□□ -0.99
SMC3-201ENST00000361804 USF2Q15853 346 aaPredicted RBP8.84□□□□□ -0.99
SMC3-201ENST00000361804 SSX2Q16385 188 aa8.84□□□□□ -0.99
SMC3-201ENST00000361804 TMEM256Q8N2U0 113 aa8.84□□□□□ -0.99
SMC3-201ENST00000361804 BCL2L2Q92843 193 aaPredicted RBP8.84□□□□□ -0.99
SMC3-201ENST00000361804 LEAP2Q969E1 77 aa8.84□□□□□ -0.99
SMC3-201ENST00000361804 PITPNC1Q9UKF7 332 aa8.84□□□□□ -0.99
SMC3-201ENST00000361804 TET2Q6N021 2002 aaPredicted RBP8.84□□□□□ -0.99
SMC3-201ENST00000361804 SP9P0CG40 484 aa8.84□□□□□ -0.99
SMC3-201ENST00000361804 THBS3P49746 956 aa8.84□□□□□ -0.99
SMC3-201ENST00000361804 NUBP1P53384 320 aa8.84□□□□□ -0.99
SMC3-201ENST00000361804 ERVK11-1P61568 191 aa8.84□□□□□ -0.99
SMC3-201ENST00000361804 OR13A1Q8NGR1 328 aa8.84□□□□□ -0.99
SMC3-201ENST00000361804 RTL8AQ9BWD3 113 aa8.84□□□□□ -0.99
SMC3-201ENST00000361804 SRD5A3Q9H8P0 318 aa8.84□□□□□ -0.99
SMC3-201ENST00000361804 B4GALT7Q9UBV7 327 aa8.84□□□□□ -0.99
SMC3-201ENST00000361804 NDUFB4O95168 129 aa8.83□□□□□ -1
SMC3-201ENST00000361804 SLC25A6P12236 298 aa8.83□□□□□ -1
SMC3-201ENST00000361804 GTF3AQ92664 365 aaKnown RBP8.83□□□□□ -1
SMC3-201ENST00000361804 HSPB7Q9UBY9 170 aa8.83□□□□□ -1
SMC3-201ENST00000361804 INTS1Q8N201 2190 aaKnown RBP8.83□□□□□ -1
SMC3-201ENST00000361804 TRAV3A0A0B4J244 114 aa8.83□□□□□ -1
SMC3-201ENST00000361804 GRIFINA4D1Z8 144 aa8.83□□□□□ -1
SMC3-201ENST00000361804 B4E171 279 aa8.83□□□□□ -1
SMC3-201ENST00000361804 C11orf94C9JXX5 98 aa8.83□□□□□ -1
SMC3-201ENST00000361804 SELLP14151 372 aa8.83□□□□□ -1
SMC3-201ENST00000361804 TSPAN7P41732 249 aa8.83□□□□□ -1
SMC3-201ENST00000361804 FABP6P51161 128 aa8.83□□□□□ -1
SMC3-201ENST00000361804 PKIAP61925 76 aa8.83□□□□□ -1
SMC3-201ENST00000361804 NRN1LQ496H8 165 aa8.83□□□□□ -1
SMC3-201ENST00000361804 EREGO14944 169 aa8.83□□□□□ -1
SMC3-201ENST00000361804 LAMTOR5O43504 91 aa8.83□□□□□ -1
SMC3-201ENST00000361804 IFNA1P01562 189 aa8.83□□□□□ -1
SMC3-201ENST00000361804 OR9G9P0C7N8 305 aa8.83□□□□□ -1
SMC3-201ENST00000361804 DUSP3P51452 185 aaPredicted RBP8.83□□□□□ -1
SMC3-201ENST00000361804 GNB1P62873 340 aa8.83□□□□□ -1
SMC3-201ENST00000361804 GALMQ96C23 342 aa8.83□□□□□ -1
SMC3-201ENST00000361804 OR5B12Q96R08 314 aa8.83□□□□□ -1
SMC3-201ENST00000361804 HIPK2Q9H2X6 1198 aa8.83□□□□□ -1
SMC3-201ENST00000361804 MBNL3Q9NUK0 354 aaKnown RBP8.83□□□□□ -1
SMC3-201ENST00000361804 TMEM242Q9NWH2 141 aa8.83□□□□□ -1
SMC3-201ENST00000361804 CELSR2Q9HCU4 2923 aa8.82□□□□□ -1
SMC3-201ENST00000361804 TSTD3H0UI37 97 aa8.82□□□□□ -1
SMC3-201ENST00000361804 SH2D1BO14796 132 aa8.82□□□□□ -1
SMC3-201ENST00000361804 YKT6O15498 198 aa8.82□□□□□ -1
SMC3-201ENST00000361804 COX5BP10606 129 aa8.82□□□□□ -1
SMC3-201ENST00000361804 MYOD1P15172 320 aa8.82□□□□□ -1
SMC3-201ENST00000361804 REC114Q7Z4M0 266 aa8.82□□□□□ -1
SMC3-201ENST00000361804 OR10P1Q8NGE3 313 aa8.82□□□□□ -1
SMC3-201ENST00000361804 P2RX4Q99571 388 aa8.82□□□□□ -1
SMC3-201ENST00000361804 PKIBQ9C010 78 aa8.82□□□□□ -1
SMC3-201ENST00000361804 TRBV20OR9-2A0A075B6H5 130 aa8.82□□□□□ -1
SMC3-201ENST00000361804 RBFOX2O43251 390 aaKnown RBP eCLIP8.82□□□□□ -1
SMC3-201ENST00000361804 CER1O95813 267 aa8.82□□□□□ -1
SMC3-201ENST00000361804 FBXW9Q5XUX1 488 aa8.82□□□□□ -1
SMC3-201ENST00000361804 ZNF645Q8N7E2 425 aa8.82□□□□□ -1
SMC3-201ENST00000361804 IMMP2LQ96T52 175 aa8.82□□□□□ -1
SMC3-201ENST00000361804 ARRDC1-AS1Q9H2J1 176 aa8.82□□□□□ -1
SMC3-201ENST00000361804 PLCE1Q9P212 2302 aa8.82□□□□□ -1
SMC3-201ENST00000361804 CTXND1A0A1B0GTU2 59 aa8.82□□□□□ -1
SMC3-201ENST00000361804 PROP1O75360 226 aa8.82□□□□□ -1
SMC3-201ENST00000361804 JOSD1Q15040 202 aaPredicted RBP8.82□□□□□ -1
SMC3-201ENST00000361804 Q8N7P7 452 aa8.82□□□□□ -1
SMC3-201ENST00000361804 SSMEM1Q8WWF3 244 aa8.82□□□□□ -1
SMC3-201ENST00000361804 PINX1Q96BK5 328 aaKnown RBP8.82□□□□□ -1
SMC3-201ENST00000361804 FAM122AQ96E09 287 aa8.82□□□□□ -1
SMC3-201ENST00000361804 RAC2P15153 192 aa8.82□□□□□ -1
SMC3-201ENST00000361804 IGHV1-2P23083 117 aa8.82□□□□□ -1
SMC3-201ENST00000361804 IL3RAP26951 378 aa8.82□□□□□ -1
SMC3-201ENST00000361804 TBC1D28Q2M2D7 210 aa8.82□□□□□ -1
SMC3-201ENST00000361804 SPRNQ5BIV9 151 aa8.82□□□□□ -1
SMC3-201ENST00000361804 H2BFWTQ7Z2G1 175 aa8.82□□□□□ -1
SMC3-201ENST00000361804 MRPL41Q8IXM3 137 aaKnown RBP8.82□□□□□ -1
SMC3-201ENST00000361804 C11orf53Q8IXP5 236 aa8.82□□□□□ -1
SMC3-201ENST00000361804 CNEP1R1Q8N9A8 125 aa8.82□□□□□ -1
SMC3-201ENST00000361804 TMEM147Q9BVK8 224 aa8.82□□□□□ -1
SMC3-201ENST00000361804 MRPS18CQ9Y3D5 142 aaKnown RBP8.82□□□□□ -1
SMC3-201ENST00000361804 RRHO14718 337 aa8.81□□□□□ -1
SMC3-201ENST00000361804 HRASP01112 189 aa8.81□□□□□ -1
SMC3-201ENST00000361804 WT1P19544 449 aaPredicted RBP8.81□□□□□ -1
SMC3-201ENST00000361804 CD82P27701 267 aa8.81□□□□□ -1
SMC3-201ENST00000361804 RPL39P5Q59GN2 51 aa8.81□□□□□ -1
SMC3-201ENST00000361804 CYB5R2Q6BCY4 276 aa8.81□□□□□ -1
SMC3-201ENST00000361804 LINC00596Q86U02 117 aa8.81□□□□□ -1
SMC3-201ENST00000361804 ABHD12Q8N2K0 398 aa8.81□□□□□ -1
SMC3-201ENST00000361804 OR2T10Q8NGZ9 312 aa8.81□□□□□ -1
SMC3-201ENST00000361804 Q8TCH9 128 aa8.81□□□□□ -1
SMC3-201ENST00000361804 KLF14Q8TD94 323 aaPredicted RBP8.81□□□□□ -1
SMC3-201ENST00000361804 SPTBN2O15020 2390 aa8.81□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 35.8 ms