RNA–Protein interactions for RNA: ENST00000354880.9

CTSA-202, Transcript of cathepsin A, humanhuman

TSL 2 BASIC

Gene CTSA, Length 1,820 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSA-202ENST00000354880 RNASEK-C17orf49H0YIS7 233 aa12.65□□□□□ -0.38
CTSA-202ENST00000354880 MPC2O95563 127 aa12.65□□□□□ -0.38
CTSA-202ENST00000354880 CRYZL1O95825 349 aa12.65□□□□□ -0.38
CTSA-202ENST00000354880 G6PCP35575 357 aa12.65□□□□□ -0.38
CTSA-202ENST00000354880 TAGLNQ01995 201 aaKnown RBP12.65□□□□□ -0.38
CTSA-202ENST00000354880 LOXL1Q08397 574 aaPredicted RBP12.65□□□□□ -0.38
CTSA-202ENST00000354880 RTL8BQ17RB0 113 aa12.65□□□□□ -0.38
CTSA-202ENST00000354880 FAM219AQ8IW50 185 aa12.65□□□□□ -0.38
CTSA-202ENST00000354880 PDZD9Q8IXQ8 264 aa12.65□□□□□ -0.38
CTSA-202ENST00000354880 OR5AN1Q8NGI8 311 aa12.65□□□□□ -0.38
CTSA-202ENST00000354880 SLC35D1Q9NTN3 355 aa12.65□□□□□ -0.38
CTSA-202ENST00000354880 MMP24Q9Y5R2 645 aa12.65□□□□□ -0.38
CTSA-202ENST00000354880 CELSR1Q9NYQ6 3014 aa12.65□□□□□ -0.38
CTSA-202ENST00000354880 A0A1B0GU03 582 aa12.65□□□□□ -0.39
CTSA-202ENST00000354880 MARCH11A6NNE9 402 aa12.65□□□□□ -0.39
CTSA-202ENST00000354880 RNF223E7ERA6 249 aa12.65□□□□□ -0.39
CTSA-202ENST00000354880 LY6LH3BQJ8 138 aa12.65□□□□□ -0.39
CTSA-202ENST00000354880 APOA2P02652 100 aa12.65□□□□□ -0.39
CTSA-202ENST00000354880 SLC25A6P12236 298 aa12.65□□□□□ -0.39
CTSA-202ENST00000354880 EPHA1P21709 976 aa12.65□□□□□ -0.39
CTSA-202ENST00000354880 HTR1DP28221 377 aa12.65□□□□□ -0.39
CTSA-202ENST00000354880 RAB32Q13637 225 aa12.65□□□□□ -0.39
CTSA-202ENST00000354880 DHRS7BQ6IAN0 325 aaPredicted RBP12.65□□□□□ -0.39
CTSA-202ENST00000354880 KRTAP1-3Q8IUG1 177 aa12.65□□□□□ -0.39
CTSA-202ENST00000354880 RPEQ96AT9 228 aa12.65□□□□□ -0.39
CTSA-202ENST00000354880 R3HDM4Q96D70 268 aa12.65□□□□□ -0.39
CTSA-202ENST00000354880 C1orf159Q96HA4 380 aa12.65□□□□□ -0.39
CTSA-202ENST00000354880 REG4Q9BYZ8 158 aa12.65□□□□□ -0.39
CTSA-202ENST00000354880 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP12.64□□□□□ -0.391e-7■■■□□ 17.5
CTSA-202ENST00000354880 LEUTXA8MZ59 168 aa12.64□□□□□ -0.39
CTSA-202ENST00000354880 H0YJW9 148 aa12.64□□□□□ -0.39
CTSA-202ENST00000354880 TXNL1O43396 289 aa12.64□□□□□ -0.39
CTSA-202ENST00000354880 GAPDHP04406 335 aaKnown RBP12.64□□□□□ -0.39
CTSA-202ENST00000354880 RRASP10301 218 aa12.64□□□□□ -0.39
CTSA-202ENST00000354880 NQO2P16083 231 aa12.64□□□□□ -0.39
CTSA-202ENST00000354880 IZUMO4Q1ZYL8 232 aa12.64□□□□□ -0.39
CTSA-202ENST00000354880 C11orf87Q6NUJ2 197 aa12.64□□□□□ -0.39
CTSA-202ENST00000354880 OR4D5Q8NGN0 318 aa12.64□□□□□ -0.39
CTSA-202ENST00000354880 Q96MF0 132 aa12.64□□□□□ -0.39
CTSA-202ENST00000354880 DPM3Q9P2X0 92 aa12.64□□□□□ -0.39
CTSA-202ENST00000354880 FXYD6-FXYD2A0A087WZ82 144 aa12.63□□□□□ -0.39
CTSA-202ENST00000354880 H7C2Y5 167 aa12.63□□□□□ -0.39
CTSA-202ENST00000354880 SCGB1D2O95969 90 aa12.63□□□□□ -0.39
CTSA-202ENST00000354880 IGKV1-16P04430 117 aa12.63□□□□□ -0.39
CTSA-202ENST00000354880 P0C879 139 aa12.63□□□□□ -0.39
CTSA-202ENST00000354880 PET100P0DJ07 73 aa12.63□□□□□ -0.39
CTSA-202ENST00000354880 CEACAM3P40198 252 aa12.63□□□□□ -0.39
CTSA-202ENST00000354880 UBE2E1P51965 193 aa12.63□□□□□ -0.39
CTSA-202ENST00000354880 S100A10P60903 97 aa12.63□□□□□ -0.39
CTSA-202ENST00000354880 SMCO1Q147U7 214 aa12.63□□□□□ -0.39
CTSA-202ENST00000354880 LDLRAD2Q5SZI1 272 aa12.63□□□□□ -0.39
CTSA-202ENST00000354880 Q6ZRM9 215 aa12.63□□□□□ -0.39
CTSA-202ENST00000354880 H2BFWTQ7Z2G1 175 aa12.63□□□□□ -0.39
CTSA-202ENST00000354880 DMBX1Q8NFW5 382 aa12.63□□□□□ -0.39
CTSA-202ENST00000354880 GRPEL2Q8TAA5 225 aa12.63□□□□□ -0.39
CTSA-202ENST00000354880 THAP6Q8TBB0 222 aa12.63□□□□□ -0.39
CTSA-202ENST00000354880 LHX4Q969G2 390 aa12.63□□□□□ -0.39
CTSA-202ENST00000354880 CACNG5Q9UF02 275 aa12.63□□□□□ -0.39
CTSA-202ENST00000354880 AKAP9Q99996 3911 aa12.63□□□□□ -0.39
CTSA-202ENST00000354880 CCDC168Q8NDH2 2452 aa12.63□□□□□ -0.39
CTSA-202ENST00000354880 ZANQ9Y493 2812 aa12.63□□□□□ -0.39
CTSA-202ENST00000354880 IGHV1-3A0A0C4DH29 117 aa12.62□□□□□ -0.39
CTSA-202ENST00000354880 A0A1W2PRD5 423 aa12.62□□□□□ -0.39
CTSA-202ENST00000354880 A0A1W2PRF3 423 aa12.62□□□□□ -0.39
CTSA-202ENST00000354880 A0A1W2PRM7 423 aa12.62□□□□□ -0.39
CTSA-202ENST00000354880 MBPP02686 304 aaPredicted RBP12.62□□□□□ -0.39
CTSA-202ENST00000354880 SLC25A4P12235 298 aa12.62□□□□□ -0.39
CTSA-202ENST00000354880 MC5RP33032 325 aa12.62□□□□□ -0.39
CTSA-202ENST00000354880 LGALS4P56470 323 aa12.62□□□□□ -0.39
CTSA-202ENST00000354880 ERVK-16P61578 105 aa12.62□□□□□ -0.39
CTSA-202ENST00000354880 TPTE2P1Q5T6R2 138 aa12.62□□□□□ -0.39
CTSA-202ENST00000354880 PDPNQ86YL7 162 aa12.62□□□□□ -0.39
CTSA-202ENST00000354880 LINC01356Q8N9X3 169 aa12.62□□□□□ -0.39
CTSA-202ENST00000354880 OR1S1Q8NH92 325 aa12.62□□□□□ -0.39
CTSA-202ENST00000354880 ZFP57Q9NU63 452 aa12.62□□□□□ -0.39
CTSA-202ENST00000354880 HIF1ANQ9NWT6 349 aa12.62□□□□□ -0.39
CTSA-202ENST00000354880 CREBBPQ92793 2442 aa12.62□□□□□ -0.39
CTSA-202ENST00000354880 ZNF469Q96JG9 3925 aaPredicted RBP12.62□□□□□ -0.39
CTSA-202ENST00000354880 TRAV20A0A0B4J274 112 aa12.62□□□□□ -0.39
CTSA-202ENST00000354880 HMSDA8MTL9 139 aa12.62□□□□□ -0.39
CTSA-202ENST00000354880 PITX3O75364 302 aa12.62□□□□□ -0.39
CTSA-202ENST00000354880 HRASP01112 189 aa12.62□□□□□ -0.39
CTSA-202ENST00000354880 NKX2-1P43699 371 aaPredicted RBP12.62□□□□□ -0.39
CTSA-202ENST00000354880 RAB13P51153 203 aa12.62□□□□□ -0.39
CTSA-202ENST00000354880 LHFPL4Q7Z7J7 247 aa12.62□□□□□ -0.39
CTSA-202ENST00000354880 FOXRED2Q8IWF2 684 aa12.62□□□□□ -0.39
CTSA-202ENST00000354880 MAPK1IP1LQ8NDC0 245 aa12.62□□□□□ -0.39
CTSA-202ENST00000354880 COA4Q9NYJ1 87 aa12.62□□□□□ -0.39
CTSA-202ENST00000354880 MBD2Q9UBB5 411 aa12.62□□□□□ -0.39
CTSA-202ENST00000354880 WASHC3Q9Y3C0 194 aa12.62□□□□□ -0.39
CTSA-202ENST00000354880 H0YIZ8 118 aa12.61□□□□□ -0.39
CTSA-202ENST00000354880 RLN2P04090 185 aa12.61□□□□□ -0.39
CTSA-202ENST00000354880 GATA3P23771 443 aa12.61□□□□□ -0.39
CTSA-202ENST00000354880 MINOS1Q5TGZ0 78 aa12.61□□□□□ -0.39
CTSA-202ENST00000354880 PRSS54Q6PEW0 395 aa12.61□□□□□ -0.39
CTSA-202ENST00000354880 SSX9Q7RTT3 188 aa12.61□□□□□ -0.39
CTSA-202ENST00000354880 MOB3BQ86TA1 216 aa12.61□□□□□ -0.39
CTSA-202ENST00000354880 ZNF546Q86UE3 836 aa12.61□□□□□ -0.39
CTSA-202ENST00000354880 VKORC1L1Q8N0U8 176 aa12.61□□□□□ -0.39
CTSA-202ENST00000354880 OR4C13Q8NGP0 309 aa12.61□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms