RNA–Protein interactions for RNA: ENST00000354497.4

RTN3-204, Transcript of reticulon 3, humanhuman

TSL 2 BASIC

Gene RTN3, Length 1,407 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN3-204ENST00000354497 DFFBO76075 338 aa8.93□□□□□ -0.98
RTN3-204ENST00000354497 FCGR3AP08637 254 aa8.93□□□□□ -0.98
RTN3-204ENST00000354497 FAUP35544 74 aaKnown RBP8.93□□□□□ -0.98
RTN3-204ENST00000354497 IFNGR2P38484 337 aa8.93□□□□□ -0.98
RTN3-204ENST00000354497 CEBPDP49716 269 aaPredicted RBP8.93□□□□□ -0.98
RTN3-204ENST00000354497 CLDN12P56749 244 aa8.93□□□□□ -0.98
RTN3-204ENST00000354497 KHDC3LQ587J8 217 aa8.93□□□□□ -0.98
RTN3-204ENST00000354497 ZFAND6Q6FIF0 208 aa8.93□□□□□ -0.98
RTN3-204ENST00000354497 ZNF770Q6IQ21 691 aaPredicted RBP8.93□□□□□ -0.98
RTN3-204ENST00000354497 SAMD12Q8N8I0 201 aa8.93□□□□□ -0.98
RTN3-204ENST00000354497 OR51L1Q8NGJ5 315 aa8.93□□□□□ -0.98
RTN3-204ENST00000354497 OR10R2Q8NGX6 335 aa8.93□□□□□ -0.98
RTN3-204ENST00000354497 PIGCQ92535 297 aa8.93□□□□□ -0.98
RTN3-204ENST00000354497 TXN2Q99757 166 aa8.93□□□□□ -0.98
RTN3-204ENST00000354497 URM1Q9BTM9 101 aaKnown RBP8.93□□□□□ -0.98
RTN3-204ENST00000354497 CSTL1Q9H114 145 aa8.93□□□□□ -0.98
RTN3-204ENST00000354497 OR52D1Q9H346 318 aa8.93□□□□□ -0.98
RTN3-204ENST00000354497 PLEKHA2Q9HB19 425 aa8.93□□□□□ -0.98
RTN3-204ENST00000354497 RHOFQ9HBH0 211 aa8.93□□□□□ -0.98
RTN3-204ENST00000354497 TRBV6-7A0A0A0MS04 114 aa8.92□□□□□ -0.98
RTN3-204ENST00000354497 TRAV14DV4A0A0A6YYC5 116 aa8.92□□□□□ -0.98
RTN3-204ENST00000354497 TRAV1-2A0A0B4J238 106 aa8.92□□□□□ -0.98
RTN3-204ENST00000354497 A0A1B0GW64 132 aa8.92□□□□□ -0.98
RTN3-204ENST00000354497 ADAP1O75689 374 aa8.92□□□□□ -0.98
RTN3-204ENST00000354497 YIF1AO95070 293 aa8.92□□□□□ -0.98
RTN3-204ENST00000354497 IFNA21P01568 189 aa8.92□□□□□ -0.98
RTN3-204ENST00000354497 PMP2P02689 132 aa8.92□□□□□ -0.98
RTN3-204ENST00000354497 SFTA3P0C7M3 94 aa8.92□□□□□ -0.98
RTN3-204ENST00000354497 GPM6AP51674 278 aa8.92□□□□□ -0.98
RTN3-204ENST00000354497 H2BFSP57053 126 aa8.92□□□□□ -0.98
RTN3-204ENST00000354497 ATP6V1FQ16864 119 aa8.92□□□□□ -0.98
RTN3-204ENST00000354497 ABCA11PQ4W5N1 156 aa8.92□□□□□ -0.98
RTN3-204ENST00000354497 C1orf194Q5T5A4 169 aa8.92□□□□□ -0.98
RTN3-204ENST00000354497 THNSL2Q86YJ6 484 aa8.92□□□□□ -0.98
RTN3-204ENST00000354497 C11orf42Q8N5U0 333 aa8.92□□□□□ -0.98
RTN3-204ENST00000354497 OR52J3Q8NH60 311 aa8.92□□□□□ -0.98
RTN3-204ENST00000354497 OR5P3Q8WZ94 311 aa8.92□□□□□ -0.98
RTN3-204ENST00000354497 RNFT2Q96EX2 444 aa8.92□□□□□ -0.98
RTN3-204ENST00000354497 PGAM5Q96HS1 289 aa8.92□□□□□ -0.98
RTN3-204ENST00000354497 HIST1H2AAQ96QV6 131 aa8.92□□□□□ -0.98
RTN3-204ENST00000354497 OR10A2Q9H208 303 aa8.92□□□□□ -0.98
RTN3-204ENST00000354497 GNG8Q9UK08 70 aa8.92□□□□□ -0.98
RTN3-204ENST00000354497 LRP12Q9Y561 859 aa8.92□□□□□ -0.98
RTN3-204ENST00000354497 MPC1Q9Y5U8 109 aa8.92□□□□□ -0.98
RTN3-204ENST00000354497 ENPP4Q9Y6X5 453 aa8.92□□□□□ -0.98
RTN3-204ENST00000354497 LYSTQ99698 3801 aa8.91□□□□□ -0.98
RTN3-204ENST00000354497 TRBV4-1A0A0J9YWV2 114 aa8.91□□□□□ -0.98
RTN3-204ENST00000354497 TEX13DA0A0J9YY54 714 aaPredicted RBP8.91□□□□□ -0.98
RTN3-204ENST00000354497 ODF3BA8MYP8 253 aa8.91□□□□□ -0.98
RTN3-204ENST00000354497 ARPC3O15145 178 aa8.91□□□□□ -0.98
RTN3-204ENST00000354497 RAMP3O60896 148 aa8.91□□□□□ -0.98
RTN3-204ENST00000354497 TK1P04183 234 aa8.91□□□□□ -0.98
RTN3-204ENST00000354497 IL6RP08887 468 aaPredicted RBP8.91□□□□□ -0.98
RTN3-204ENST00000354497 GZMBP10144 247 aa8.91□□□□□ -0.98
RTN3-204ENST00000354497 CD24P25063 80 aa8.91□□□□□ -0.98
RTN3-204ENST00000354497 THBS3P49746 956 aa8.91□□□□□ -0.98
RTN3-204ENST00000354497 LUMP51884 338 aaPredicted RBP8.91□□□□□ -0.98
RTN3-204ENST00000354497 GRB2P62993 217 aaKnown RBP8.91□□□□□ -0.98
RTN3-204ENST00000354497 SSBP1Q04837 148 aaKnown RBP8.91□□□□□ -0.98
RTN3-204ENST00000354497 EIF2B1Q14232 305 aaKnown RBP8.91□□□□□ -0.98
RTN3-204ENST00000354497 ACTBL2Q562R1 376 aa8.91□□□□□ -0.98
RTN3-204ENST00000354497 LDLRAD2Q5SZI1 272 aa8.91□□□□□ -0.98
RTN3-204ENST00000354497 CDPF1Q6NVV7 123 aa8.91□□□□□ -0.98
RTN3-204ENST00000354497 SFXN4Q6P4A7 337 aa8.91□□□□□ -0.98
RTN3-204ENST00000354497 C8orf86Q6ZUL3 223 aa8.91□□□□□ -0.98
RTN3-204ENST00000354497 LRRTM1Q86UE6 522 aa8.91□□□□□ -0.98
RTN3-204ENST00000354497 ZDHHC23Q8IYP9 409 aa8.91□□□□□ -0.98
RTN3-204ENST00000354497 RNASE8Q8TDE3 154 aaKnown RBP8.91□□□□□ -0.98
RTN3-204ENST00000354497 CCDC107Q8WV48 283 aa8.91□□□□□ -0.98
RTN3-204ENST00000354497 ZNRF4Q8WWF5 429 aa8.91□□□□□ -0.98
RTN3-204ENST00000354497 PHYHIPQ92561 330 aa8.91□□□□□ -0.98
RTN3-204ENST00000354497 SMIM12Q96EX1 92 aa8.91□□□□□ -0.98
RTN3-204ENST00000354497 SDSLQ96GA7 329 aa8.91□□□□□ -0.98
RTN3-204ENST00000354497 AKR1E2Q96JD6 320 aa8.91□□□□□ -0.98
RTN3-204ENST00000354497 INTS14Q96SY0 518 aa8.91□□□□□ -0.98
RTN3-204ENST00000354497 NIPSNAP1Q9BPW8 284 aa8.91□□□□□ -0.98
RTN3-204ENST00000354497 FGF23Q9GZV9 251 aaPredicted RBP8.91□□□□□ -0.98
RTN3-204ENST00000354497 PRO1933Q9H354 126 aa8.91□□□□□ -0.98
RTN3-204ENST00000354497 RPS10P5Q9NQ39 176 aa8.91□□□□□ -0.98
RTN3-204ENST00000354497 PARP11Q9NR21 331 aa8.91□□□□□ -0.98
RTN3-204ENST00000354497 TAS2R8Q9NYW2 309 aa8.91□□□□□ -0.98
RTN3-204ENST00000354497 RPH3ALQ9UNE2 315 aa8.91□□□□□ -0.98
RTN3-204ENST00000354497 LSM4Q9Y4Z0 139 aaKnown RBP8.91□□□□□ -0.98
RTN3-204ENST00000354497 HUWE1Q7Z6Z7 4374 aaKnown RBP8.91□□□□□ -0.98
RTN3-204ENST00000354497 ARPC1BO15143 372 aaKnown RBP8.9□□□□□ -0.98
RTN3-204ENST00000354497 DIRAS1O95057 198 aa8.9□□□□□ -0.98
RTN3-204ENST00000354497 SNRPCP09234 159 aaKnown RBP8.9□□□□□ -0.98
RTN3-204ENST00000354497 ECI1P42126 302 aa8.9□□□□□ -0.98
RTN3-204ENST00000354497 DYNLT3P51808 116 aa8.9□□□□□ -0.98
RTN3-204ENST00000354497 ZNF121P58317 390 aaPredicted RBP8.9□□□□□ -0.98
RTN3-204ENST00000354497 TAS2R19P59542 299 aa8.9□□□□□ -0.98
RTN3-204ENST00000354497 UBE2V2Q15819 145 aa8.9□□□□□ -0.98
RTN3-204ENST00000354497 TMEM268Q5VZI3 342 aa8.9□□□□□ -0.98
RTN3-204ENST00000354497 WDR73Q6P4I2 378 aa8.9□□□□□ -0.98
RTN3-204ENST00000354497 C18orf65Q6ZTR6 163 aa8.9□□□□□ -0.98
RTN3-204ENST00000354497 SSX7Q7RTT5 188 aa8.9□□□□□ -0.98
RTN3-204ENST00000354497 TCF24Q7RTU0 167 aa8.9□□□□□ -0.98
RTN3-204ENST00000354497 CD177Q8N6Q3 437 aa8.9□□□□□ -0.98
RTN3-204ENST00000354497 OR5AP2Q8NGF4 316 aa8.9□□□□□ -0.98
RTN3-204ENST00000354497 KIRREL1Q96J84 757 aa8.9□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 41 ms