RNA–Protein interactions for RNA: ENST00000348962.6

PTPRO-202, Transcript of protein tyrosine phosphatase, receptor type O, humanhuman

TSL 1 (best) BASIC

Gene PTPRO, Length 5,061 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRO-202ENST00000348962 FAM181BA6NEQ2 426 aa13.18□□□□□ -0.3
PTPRO-202ENST00000348962 A8MWL6 223 aa13.18□□□□□ -0.3
PTPRO-202ENST00000348962 NPBWR2P48146 333 aa13.18□□□□□ -0.3
PTPRO-202ENST00000348962 ATP5IP56385 69 aaPredicted RBP13.18□□□□□ -0.3
PTPRO-202ENST00000348962 SCGB1D4Q6XE38 83 aa13.18□□□□□ -0.3
PTPRO-202ENST00000348962 C9orf106Q8NAJ2 232 aa13.18□□□□□ -0.3
PTPRO-202ENST00000348962 OR5AU1Q8NGC0 362 aa13.18□□□□□ -0.3
PTPRO-202ENST00000348962 DUX5Q96PT3 197 aa13.18□□□□□ -0.3
PTPRO-202ENST00000348962 PARD6AQ9NPB6 346 aa13.18□□□□□ -0.3
PTPRO-202ENST00000348962 TMEM189A5PLL7 270 aa13.18□□□□□ -0.3
PTPRO-202ENST00000348962 UNQ9370/PRO34162Q6UXP9 181 aa13.18□□□□□ -0.3
PTPRO-202ENST00000348962 AQP3Q92482 292 aa13.18□□□□□ -0.3
PTPRO-202ENST00000348962 ESPL1Q14674 2120 aa13.18□□□□□ -0.3
PTPRO-202ENST00000348962 M0R2Z0 102 aa13.17□□□□□ -0.3
PTPRO-202ENST00000348962 TM4SF5O14894 197 aa13.17□□□□□ -0.3
PTPRO-202ENST00000348962 SNRNP200O75643 2136 aaKnown RBP13.17□□□□□ -0.3
PTPRO-202ENST00000348962 SNRPD3P62318 126 aaKnown RBP13.17□□□□□ -0.3
PTPRO-202ENST00000348962 MYOZ3Q8TDC0 251 aa13.17□□□□□ -0.3
PTPRO-202ENST00000348962 MYOFQ9NZM1 2061 aa13.17□□□□□ -0.3
PTPRO-202ENST00000348962 NPIPB9F8W1W9 429 aa13.17□□□□□ -0.3
PTPRO-202ENST00000348962 KCNAB3O43448 404 aa13.17□□□□□ -0.3
PTPRO-202ENST00000348962 ACAA1P09110 424 aaPredicted RBP13.17□□□□□ -0.3
PTPRO-202ENST00000348962 CRYBA2P53672 197 aa13.17□□□□□ -0.3
PTPRO-202ENST00000348962 DLX1P56177 255 aa13.17□□□□□ -0.3
PTPRO-202ENST00000348962 HLA-DRB5Q30154 266 aa13.17□□□□□ -0.3
PTPRO-202ENST00000348962 LGALSLQ3ZCW2 172 aaPredicted RBP13.17□□□□□ -0.3
PTPRO-202ENST00000348962 OR4X2Q8NGF9 303 aa13.17□□□□□ -0.3
PTPRO-202ENST00000348962 A0A0G2JLM5 398 aa13.17□□□□□ -0.3
PTPRO-202ENST00000348962 NTN3O00634 580 aaPredicted RBP13.17□□□□□ -0.3
PTPRO-202ENST00000348962 LYRM7Q5U5X0 104 aa13.17□□□□□ -0.3
PTPRO-202ENST00000348962 AMMECR1LQ6DCA0 310 aa13.17□□□□□ -0.3
PTPRO-202ENST00000348962 RBKSQ9H477 322 aa13.17□□□□□ -0.3
PTPRO-202ENST00000348962 C17orf100A8MU93 164 aa13.17□□□□□ -0.3
PTPRO-202ENST00000348962 TCF19Q9Y242 345 aa13.17□□□□□ -0.3
PTPRO-202ENST00000348962 A0A0G2JMM0 328 aa13.16□□□□□ -0.3
PTPRO-202ENST00000348962 A0A1W2PPB8 328 aa13.16□□□□□ -0.3
PTPRO-202ENST00000348962 A0A1W2PRS3 328 aa13.16□□□□□ -0.3
PTPRO-202ENST00000348962 KIR3DP1A8MWS1 328 aa13.16□□□□□ -0.3
PTPRO-202ENST00000348962 LYRM2Q9NU23 88 aaPredicted RBP13.16□□□□□ -0.3
PTPRO-202ENST00000348962 CRXO43186 299 aaPredicted RBP13.16□□□□□ -0.3
PTPRO-202ENST00000348962 IGHV1-2P23083 117 aa13.16□□□□□ -0.3
PTPRO-202ENST00000348962 ZNF345Q14585 488 aa13.16□□□□□ -0.3
PTPRO-202ENST00000348962 ZNF79Q15937 498 aa13.16□□□□□ -0.3
PTPRO-202ENST00000348962 PPP1R3EQ9H7J1 279 aa13.16□□□□□ -0.3
PTPRO-202ENST00000348962 AP5S1Q9NUS5 200 aa13.16□□□□□ -0.3
PTPRO-202ENST00000348962 TUBD1Q9UJT1 453 aa13.16□□□□□ -0.3
PTPRO-202ENST00000348962 SIAH2O43255 324 aa13.16□□□□□ -0.3
PTPRO-202ENST00000348962 PLAUP00749 431 aa13.16□□□□□ -0.3
PTPRO-202ENST00000348962 TRGV3P03979 118 aa13.16□□□□□ -0.3
PTPRO-202ENST00000348962 ACP7Q6ZNF0 438 aa13.16□□□□□ -0.3
PTPRO-202ENST00000348962 GSX1Q9H4S2 264 aaPredicted RBP13.16□□□□□ -0.3
PTPRO-202ENST00000348962 PGPA6NDG6 321 aa13.16□□□□□ -0.3
PTPRO-202ENST00000348962 SNRPCP09234 159 aaKnown RBP13.16□□□□□ -0.3
PTPRO-202ENST00000348962 NUTF2P61970 127 aaKnown RBP13.16□□□□□ -0.3
PTPRO-202ENST00000348962 PSG9Q00887 426 aa13.16□□□□□ -0.3
PTPRO-202ENST00000348962 GPR146Q96CH1 333 aa13.16□□□□□ -0.3
PTPRO-202ENST00000348962 DNAJC4Q9NNZ3 241 aa13.16□□□□□ -0.3
PTPRO-202ENST00000348962 HSPB7Q9UBY9 170 aa13.16□□□□□ -0.3
PTPRO-202ENST00000348962 SSTR5P35346 364 aa13.15□□□□□ -0.3
PTPRO-202ENST00000348962 ELOBQ15370 118 aa13.15□□□□□ -0.3
PTPRO-202ENST00000348962 RTN4RL2Q86UN3 420 aa13.15□□□□□ -0.3
PTPRO-202ENST00000348962 IL22RA2Q969J5 263 aa13.15□□□□□ -0.3
PTPRO-202ENST00000348962 GPR179Q6PRD1 2367 aa13.15□□□□□ -0.3
PTPRO-202ENST00000348962 COL6A6A6NMZ7 2263 aa13.15□□□□□ -0.3
PTPRO-202ENST00000348962 PARP14Q460N5 1801 aa13.15□□□□□ -0.3
PTPRO-202ENST00000348962 CLDN18P56856 261 aa13.15□□□□□ -0.3
PTPRO-202ENST00000348962 MEF2CQ06413 473 aaPredicted RBP13.15□□□□□ -0.3
PTPRO-202ENST00000348962 TUBA4BQ9H853 241 aa13.15□□□□□ -0.3
PTPRO-202ENST00000348962 CCDC88CQ9P219 2028 aa13.15□□□□□ -0.3
PTPRO-202ENST00000348962 TGFBR3LH3BV60 316 aa13.15□□□□□ -0.3
PTPRO-202ENST00000348962 MEOX2P50222 304 aa13.15□□□□□ -0.3
PTPRO-202ENST00000348962 LRP11Q86VZ4 500 aa13.15□□□□□ -0.3
PTPRO-202ENST00000348962 CBLN4Q9NTU7 201 aa13.15□□□□□ -0.3
PTPRO-202ENST00000348962 MIA3Q5JRA6 1907 aa13.15□□□□□ -0.3
PTPRO-202ENST00000348962 CGB1A6NKQ9 187 aa13.15□□□□□ -0.3
PTPRO-202ENST00000348962 CFHR1Q03591 330 aa13.15□□□□□ -0.3
PTPRO-202ENST00000348962 AWAT1Q58HT5 328 aa13.15□□□□□ -0.3
PTPRO-202ENST00000348962 OR51G1Q8NGK1 321 aa13.15□□□□□ -0.3
PTPRO-202ENST00000348962 NBASA2RRP1 2371 aa13.15□□□□□ -0.3
PTPRO-202ENST00000348962 EFEMP2O95967 443 aa13.14□□□□□ -0.31
PTPRO-202ENST00000348962 PMS2P11Q13670 270 aa13.14□□□□□ -0.31
PTPRO-202ENST00000348962 C19orf54Q5BKX5 351 aa13.14□□□□□ -0.31
PTPRO-202ENST00000348962 MYO16Q9Y6X6 1858 aa13.14□□□□□ -0.31
PTPRO-202ENST00000348962 TMEM218A2RU14 115 aa13.14□□□□□ -0.31
PTPRO-202ENST00000348962 CDKN1AP38936 164 aa13.14□□□□□ -0.31
PTPRO-202ENST00000348962 TNFRSF9Q07011 255 aa13.14□□□□□ -0.31
PTPRO-202ENST00000348962 GTF2H5Q6ZYL4 71 aa13.14□□□□□ -0.31
PTPRO-202ENST00000348962 OSR1Q8TAX0 266 aaPredicted RBP13.14□□□□□ -0.31
PTPRO-202ENST00000348962 ST6GAL2Q96JF0 529 aa13.14□□□□□ -0.31
PTPRO-202ENST00000348962 MAP1LC3CQ9BXW4 147 aa13.14□□□□□ -0.31
PTPRO-202ENST00000348962 UBE2L6O14933 153 aa13.14□□□□□ -0.31
PTPRO-202ENST00000348962 DLK1P80370 383 aa13.14□□□□□ -0.31
PTPRO-202ENST00000348962 PSG7Q13046 419 aa13.14□□□□□ -0.31
PTPRO-202ENST00000348962 TMEM183BQ1AE95 376 aa13.14□□□□□ -0.31
PTPRO-202ENST00000348962 SLC16A13Q7RTY0 426 aa13.14□□□□□ -0.31
PTPRO-202ENST00000348962 OR11H7Q8NGC8 314 aa13.14□□□□□ -0.31
PTPRO-202ENST00000348962 OR10D4PQ8NGN7 298 aa13.14□□□□□ -0.31
PTPRO-202ENST00000348962 ARFGEF1Q9Y6D6 1849 aa13.14□□□□□ -0.31
PTPRO-202ENST00000348962 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP13.14□□□□□ -0.31
PTPRO-202ENST00000348962 RUNX1Q01196 453 aa13.14□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms