RNA–Protein interactions for RNA: ENST00000344550.4

CEACAM3-201, Transcript of carcinoembryonic antigen related cell adhesion molecule 3, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CEACAM3, Length 1,022 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CEACAM3-201ENST00000344550 CNIH1O95406 144 aa15.54■□□□□ 0.08
CEACAM3-201ENST00000344550 LGALS1P09382 135 aaKnown RBP15.54■□□□□ 0.08
CEACAM3-201ENST00000344550 LINC00205P59089 165 aa15.54■□□□□ 0.08
CEACAM3-201ENST00000344550 MXD1Q05195 221 aa15.54■□□□□ 0.08
CEACAM3-201ENST00000344550 MSMO1Q15800 293 aa15.54■□□□□ 0.08
CEACAM3-201ENST00000344550 VMA21Q3ZAQ7 101 aa15.54■□□□□ 0.08
CEACAM3-201ENST00000344550 LFNGQ8NES3 379 aa15.54■□□□□ 0.08
CEACAM3-201ENST00000344550 DIABLOQ9NR28 239 aa15.54■□□□□ 0.08
CEACAM3-201ENST00000344550 ELF5Q9UKW6 265 aaPredicted RBP15.54■□□□□ 0.08
CEACAM3-201ENST00000344550 SPATA2Q9UM82 520 aa15.54■□□□□ 0.08
CEACAM3-201ENST00000344550 PRELID3BQ9Y3B1 194 aa15.54■□□□□ 0.08
CEACAM3-201ENST00000344550 UBE2KP61086 200 aa15.53■□□□□ 0.08
CEACAM3-201ENST00000344550 IDNKQ5T6J7 187 aa15.53■□□□□ 0.08
CEACAM3-201ENST00000344550 BVESQ8NE79 360 aa15.53■□□□□ 0.08
CEACAM3-201ENST00000344550 CLCC1Q96S66 551 aa15.53■□□□□ 0.08
CEACAM3-201ENST00000344550 A3GALT2U3KPV4 340 aa15.53■□□□□ 0.08
CEACAM3-201ENST00000344550 A0A0G2JLM5 398 aa15.52■□□□□ 0.08
CEACAM3-201ENST00000344550 LINC01619G3V211 115 aa15.52■□□□□ 0.08
CEACAM3-201ENST00000344550 TUSC2O75896 110 aa15.52■□□□□ 0.08
CEACAM3-201ENST00000344550 GNB1P62873 340 aa15.52■□□□□ 0.08
CEACAM3-201ENST00000344550 DEFB121Q5J5C9 76 aa15.52■□□□□ 0.08
CEACAM3-201ENST00000344550 OVCH2Q7RTZ1 564 aa15.52■□□□□ 0.08
CEACAM3-201ENST00000344550 ZNF429Q86V71 674 aa15.52■□□□□ 0.08
CEACAM3-201ENST00000344550 POC5Q8NA72 575 aa15.52■□□□□ 0.08
CEACAM3-201ENST00000344550 NUDCD2Q8WVJ2 157 aa15.52■□□□□ 0.08
CEACAM3-201ENST00000344550 SLC25A38Q96DW6 304 aa15.52■□□□□ 0.08
CEACAM3-201ENST00000344550 C5orf30Q96GV9 206 aa15.52■□□□□ 0.08
CEACAM3-201ENST00000344550 RHOVQ96L33 236 aa15.52■□□□□ 0.08
CEACAM3-201ENST00000344550 HSD17B10Q99714 261 aaKnown RBP15.52■□□□□ 0.08
CEACAM3-201ENST00000344550 TPSG1Q9NRR2 321 aa15.52■□□□□ 0.08
CEACAM3-201ENST00000344550 SCOCQ9UIL1 159 aa15.52■□□□□ 0.08
CEACAM3-201ENST00000344550 MRPS7Q9Y2R9 242 aaKnown RBP15.52■□□□□ 0.08
CEACAM3-201ENST00000344550 SSX5O60225 188 aa15.51■□□□□ 0.07
CEACAM3-201ENST00000344550 HSPB1P04792 205 aaKnown RBP15.51■□□□□ 0.07
CEACAM3-201ENST00000344550 CBX5P45973 191 aa15.51■□□□□ 0.07
CEACAM3-201ENST00000344550 ASPHD1Q5U4P2 390 aa15.51■□□□□ 0.07
CEACAM3-201ENST00000344550 TSPAN14Q8NG11 270 aa15.51■□□□□ 0.07
CEACAM3-201ENST00000344550 FAM103A1Q9BTL3 118 aaKnown RBP15.51■□□□□ 0.07
CEACAM3-201ENST00000344550 RBMX2Q9Y388 322 aaKnown RBP15.51■□□□□ 0.07
CEACAM3-201ENST00000344550 TRAV18A0A075B6X5 111 aa15.5■□□□□ 0.07
CEACAM3-201ENST00000344550 SRRM4A7MD48 611 aaKnown RBP15.5■□□□□ 0.07
CEACAM3-201ENST00000344550 LINC00473A8K010 186 aa15.5■□□□□ 0.07
CEACAM3-201ENST00000344550 OVOL1O14753 267 aa15.5■□□□□ 0.07
CEACAM3-201ENST00000344550 CLEC2LP0C7M8 214 aa15.5■□□□□ 0.07
CEACAM3-201ENST00000344550 AADACP22760 399 aa15.5■□□□□ 0.07
CEACAM3-201ENST00000344550 TPPP2P59282 170 aa15.5■□□□□ 0.07
CEACAM3-201ENST00000344550 SSBP2P81877 361 aaPredicted RBP15.5■□□□□ 0.07
CEACAM3-201ENST00000344550 PRSS8Q16651 343 aa15.5■□□□□ 0.07
CEACAM3-201ENST00000344550 HOGA1Q86XE5 327 aa15.5■□□□□ 0.07
CEACAM3-201ENST00000344550 BEST4Q8NFU0 473 aa15.5■□□□□ 0.07
CEACAM3-201ENST00000344550 OR5H6Q8NGV6 325 aa15.5■□□□□ 0.07
CEACAM3-201ENST00000344550 GRPEL2Q8TAA5 225 aa15.5■□□□□ 0.07
CEACAM3-201ENST00000344550 B9D2Q9BPU9 175 aa15.5■□□□□ 0.07
CEACAM3-201ENST00000344550 RNF167Q9H6Y7 350 aa15.5■□□□□ 0.07
CEACAM3-201ENST00000344550 AIREO43918 545 aa15.49■□□□□ 0.07
CEACAM3-201ENST00000344550 CRYZL1O95825 349 aa15.49■□□□□ 0.07
CEACAM3-201ENST00000344550 TRGV3P03979 118 aa15.49■□□□□ 0.07
CEACAM3-201ENST00000344550 NFYAP23511 347 aaPredicted RBP15.49■□□□□ 0.07
CEACAM3-201ENST00000344550 ZNF66Q6ZN08 573 aa15.49■□□□□ 0.07
CEACAM3-201ENST00000344550 KCTD9Q7L273 389 aa15.49■□□□□ 0.07
CEACAM3-201ENST00000344550 ZBTB34Q8NCN2 500 aa15.49■□□□□ 0.07
CEACAM3-201ENST00000344550 YIPF6Q96EC8 236 aa15.49■□□□□ 0.07
CEACAM3-201ENST00000344550 S100A16Q96FQ6 103 aaKnown RBP15.49■□□□□ 0.07
CEACAM3-201ENST00000344550 OR5B12Q96R08 314 aa15.49■□□□□ 0.07
CEACAM3-201ENST00000344550 AUNIPQ9H7T9 357 aa15.49■□□□□ 0.07
CEACAM3-201ENST00000344550 XRCC3O43542 346 aa15.48■□□□□ 0.07
CEACAM3-201ENST00000344550 ARPC4P59998 168 aa15.48■□□□□ 0.07
CEACAM3-201ENST00000344550 PJVKQ0ZLH3 352 aa15.48■□□□□ 0.07
CEACAM3-201ENST00000344550 CDK10Q15131 360 aa15.48■□□□□ 0.07
CEACAM3-201ENST00000344550 VSTM2AQ8TAG5 236 aa15.48■□□□□ 0.07
CEACAM3-201ENST00000344550 DCUN1D4Q92564 292 aa15.48■□□□□ 0.07
CEACAM3-201ENST00000344550 KCTD12Q96CX2 325 aaKnown RBP15.48■□□□□ 0.07
CEACAM3-201ENST00000344550 USMG5Q96IX5 58 aa15.48■□□□□ 0.07
CEACAM3-201ENST00000344550 AIFM2Q9BRQ8 373 aa15.48■□□□□ 0.07
CEACAM3-201ENST00000344550 RANGRFQ9HD47 186 aaPredicted RBP15.48■□□□□ 0.07
CEACAM3-201ENST00000344550 C13orf42A0A1B0GVH6 325 aa15.47■□□□□ 0.07
CEACAM3-201ENST00000344550 TRIM64CA6NLI5 447 aa15.47■□□□□ 0.07
CEACAM3-201ENST00000344550 ACTL6BO94805 426 aa15.47■□□□□ 0.07
CEACAM3-201ENST00000344550 IGLV2-14P01704 120 aa15.47■□□□□ 0.07
CEACAM3-201ENST00000344550 ZP3P21754 424 aa15.47■□□□□ 0.07
CEACAM3-201ENST00000344550 MMD2Q8IY49 270 aa15.47■□□□□ 0.07
CEACAM3-201ENST00000344550 OR4S2Q8NH73 311 aa15.47■□□□□ 0.07
CEACAM3-201ENST00000344550 BORCS5Q969J3 196 aa15.47■□□□□ 0.07
CEACAM3-201ENST00000344550 MS4A10Q96PG2 267 aa15.47■□□□□ 0.07
CEACAM3-201ENST00000344550 SPIN2AQ99865 258 aa15.47■□□□□ 0.07
CEACAM3-201ENST00000344550 SPIN2BQ9BPZ2 258 aa15.47■□□□□ 0.07
CEACAM3-201ENST00000344550 TINAGL1Q9GZM7 467 aaPredicted RBP15.47■□□□□ 0.07
CEACAM3-201ENST00000344550 ZNF256Q9Y2P7 627 aaPredicted RBP15.47■□□□□ 0.07
CEACAM3-201ENST00000344550 NHLRC4P0CG21 123 aaPredicted RBP15.46■□□□□ 0.07
CEACAM3-201ENST00000344550 ECI1P42126 302 aa15.46■□□□□ 0.07
CEACAM3-201ENST00000344550 KIR2DS2P43631 304 aa15.46■□□□□ 0.07
CEACAM3-201ENST00000344550 EIF4EBP1Q13541 118 aaPredicted RBP15.46■□□□□ 0.07
CEACAM3-201ENST00000344550 MRGPRG-AS1Q2M3A8 158 aa15.46■□□□□ 0.07
CEACAM3-201ENST00000344550 UBE2NLQ5JXB2 153 aa15.46■□□□□ 0.07
CEACAM3-201ENST00000344550 ACSM6Q6P461 480 aa15.46■□□□□ 0.07
CEACAM3-201ENST00000344550 DLX4Q92988 240 aaPredicted RBP15.46■□□□□ 0.07
CEACAM3-201ENST00000344550 ZNF355PQ9NSJ1 428 aa15.46■□□□□ 0.07
CEACAM3-201ENST00000344550 LSM4Q9Y4Z0 139 aaKnown RBP15.46■□□□□ 0.07
CEACAM3-201ENST00000344550 IGKV1D-13A0A0B4J2D9 117 aa15.45■□□□□ 0.06
CEACAM3-201ENST00000344550 MSGN1A6NI15 193 aa15.45■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 42.9 ms