RNA–Protein interactions for RNA: ENST00000339998.10

MBD1-203, Transcript of methyl-CpG binding domain protein 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene MBD1, Length 2,956 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MBD1-203ENST00000339998 PPIAL4EA0A075B759 164 aa12.72□□□□□ -0.37
MBD1-203ENST00000339998 PPIAL4DF5H284 164 aa12.72□□□□□ -0.37
MBD1-203ENST00000339998 TSPAN4O14817 238 aa12.72□□□□□ -0.37
MBD1-203ENST00000339998 TSPAN15O95858 294 aa12.72□□□□□ -0.37
MBD1-203ENST00000339998 CD3EP07766 207 aa12.72□□□□□ -0.37
MBD1-203ENST00000339998 PPIAL4FP0DN26 164 aa12.72□□□□□ -0.37
MBD1-203ENST00000339998 TEX36Q5VZQ5 186 aa12.72□□□□□ -0.37
MBD1-203ENST00000339998 SLC25A24Q6NUK1 477 aa12.72□□□□□ -0.37
MBD1-203ENST00000339998 TMEM88Q6PEY1 159 aa12.72□□□□□ -0.37
MBD1-203ENST00000339998 PUSL1Q8N0Z8 303 aaKnown RBP12.72□□□□□ -0.37
MBD1-203ENST00000339998 OR4C12Q96R67 309 aa12.72□□□□□ -0.37
MBD1-203ENST00000339998 TSNAXQ99598 290 aaKnown RBP12.72□□□□□ -0.37
MBD1-203ENST00000339998 HSD17B10Q99714 261 aaKnown RBP12.72□□□□□ -0.37
MBD1-203ENST00000339998 PARP11Q9NR21 331 aa12.72□□□□□ -0.37
MBD1-203ENST00000339998 PPIAL4AQ9Y536 164 aa12.72□□□□□ -0.37
MBD1-203ENST00000339998 WSB1Q9Y6I7 421 aa12.72□□□□□ -0.37
MBD1-203ENST00000339998 IGSF10Q6WRI0 2623 aa12.72□□□□□ -0.37
MBD1-203ENST00000339998 RNASEK-C17orf49H0YIS7 233 aa12.72□□□□□ -0.37
MBD1-203ENST00000339998 SLC25A6P12236 298 aa12.72□□□□□ -0.37
MBD1-203ENST00000339998 RPL31P62899 125 aaKnown RBP12.72□□□□□ -0.37
MBD1-203ENST00000339998 ZNF266Q14584 549 aa12.72□□□□□ -0.37
MBD1-203ENST00000339998 ZFHX3Q15911 3703 aa12.71□□□□□ -0.37
MBD1-203ENST00000339998 REG1BP48304 166 aa12.71□□□□□ -0.37
MBD1-203ENST00000339998 F2RL1P55085 397 aa12.71□□□□□ -0.37
MBD1-203ENST00000339998 AKIRIN2Q53H80 203 aa12.71□□□□□ -0.37
MBD1-203ENST00000339998 TRAT1Q6PIZ9 186 aa12.71□□□□□ -0.37
MBD1-203ENST00000339998 CA5BP1Q8WTZ4 195 aa12.71□□□□□ -0.37
MBD1-203ENST00000339998 ATP5SQ99766 215 aa12.71□□□□□ -0.37
MBD1-203ENST00000339998 COL8A2P25067 703 aa12.71□□□□□ -0.38
MBD1-203ENST00000339998 ST6GALNAC3Q8NDV1 305 aa12.71□□□□□ -0.38
MBD1-203ENST00000339998 ZCCHC14Q8WYQ9 949 aaKnown RBP12.71□□□□□ -0.38
MBD1-203ENST00000339998 RARRES2Q99969 163 aa12.71□□□□□ -0.38
MBD1-203ENST00000339998 ZNF251Q9BRH9 671 aa12.71□□□□□ -0.38
MBD1-203ENST00000339998 UTP20O75691 2785 aaKnown RBP12.7□□□□□ -0.38
MBD1-203ENST00000339998 CHRNB4P30926 498 aa12.7□□□□□ -0.38
MBD1-203ENST00000339998 PPT1P50897 306 aa12.7□□□□□ -0.38
MBD1-203ENST00000339998 DIAPH2-AS1Q14236 149 aa12.7□□□□□ -0.38
MBD1-203ENST00000339998 ZNF66Q6ZN08 573 aa12.7□□□□□ -0.38
MBD1-203ENST00000339998 ETV3LQ6ZN32 361 aa12.7□□□□□ -0.38
MBD1-203ENST00000339998 EGLN1Q9GZT9 426 aa12.7□□□□□ -0.38
MBD1-203ENST00000339998 NGBQ9NPG2 151 aa12.7□□□□□ -0.38
MBD1-203ENST00000339998 CTNNBIP1Q9NSA3 81 aaPredicted RBP12.7□□□□□ -0.38
MBD1-203ENST00000339998 HSPB7Q9UBY9 170 aa12.7□□□□□ -0.38
MBD1-203ENST00000339998 CRYBG3Q68DQ2 2970 aa12.7□□□□□ -0.38
MBD1-203ENST00000339998 ATG12O94817 140 aa12.7□□□□□ -0.38
MBD1-203ENST00000339998 OPN1MWP04001 364 aa12.7□□□□□ -0.38
MBD1-203ENST00000339998 OPN1MW2P0DN77 364 aa12.7□□□□□ -0.38
MBD1-203ENST00000339998 OPN1MW3P0DN78 364 aa12.7□□□□□ -0.38
MBD1-203ENST00000339998 TMEM200BQ69YZ2 307 aa12.7□□□□□ -0.38
MBD1-203ENST00000339998 LILRB2Q8N423 598 aa12.7□□□□□ -0.38
MBD1-203ENST00000339998 ZNF525Q8N782 197 aa12.7□□□□□ -0.38
MBD1-203ENST00000339998 ZNF383Q8NA42 475 aa12.7□□□□□ -0.38
MBD1-203ENST00000339998 SPG11Q96JI7 2443 aa12.7□□□□□ -0.38
MBD1-203ENST00000339998 TRAV38-1A0A0B4J264 116 aa12.69□□□□□ -0.38
MBD1-203ENST00000339998 UBE2L5PA0A1B0GUS4 154 aa12.69□□□□□ -0.38
MBD1-203ENST00000339998 CEBPZOSA8MTT3 80 aa12.69□□□□□ -0.38
MBD1-203ENST00000339998 SFTA3P0C7M3 94 aa12.69□□□□□ -0.38
MBD1-203ENST00000339998 DEFA4P12838 97 aa12.69□□□□□ -0.38
MBD1-203ENST00000339998 APOBEC3AP31941 199 aaPredicted RBP12.69□□□□□ -0.38
MBD1-203ENST00000339998 MRPS11P82912 194 aaKnown RBP12.69□□□□□ -0.38
MBD1-203ENST00000339998 IL34Q6ZMJ4 242 aa12.69□□□□□ -0.38
MBD1-203ENST00000339998 EIF5A2Q9GZV4 153 aaKnown RBP12.69□□□□□ -0.38
MBD1-203ENST00000339998 NDRG3Q9UGV2 375 aa12.69□□□□□ -0.38
MBD1-203ENST00000339998 ABCA1O95477 2261 aa12.69□□□□□ -0.38
MBD1-203ENST00000339998 DVL1O14640 695 aa12.69□□□□□ -0.38
MBD1-203ENST00000339998 IFNA17P01571 189 aa12.69□□□□□ -0.38
MBD1-203ENST00000339998 MMP9P14780 707 aa12.69□□□□□ -0.38
MBD1-203ENST00000339998 UQCRFS1P47985 274 aa12.69□□□□□ -0.38
MBD1-203ENST00000339998 BAXQ07812 192 aa12.69□□□□□ -0.38
MBD1-203ENST00000339998 UNQ6494/PRO21346Q6UXR6 183 aa12.69□□□□□ -0.38
MBD1-203ENST00000339998 DTD1Q8TEA8 209 aa12.69□□□□□ -0.38
MBD1-203ENST00000339998 IDI2-AS1Q9NZ38 188 aa12.69□□□□□ -0.38
MBD1-203ENST00000339998 IGKV1-16P04430 117 aa12.69□□□□□ -0.38
MBD1-203ENST00000339998 SNCAP37840 140 aa12.69□□□□□ -0.38
MBD1-203ENST00000339998 AKR1C3P42330 323 aa12.69□□□□□ -0.38
MBD1-203ENST00000339998 NPBWR1P48145 328 aa12.69□□□□□ -0.38
MBD1-203ENST00000339998 AVPI1Q5T686 147 aa12.69□□□□□ -0.38
MBD1-203ENST00000339998 MUC15Q8N387 334 aa12.69□□□□□ -0.38
MBD1-203ENST00000339998 S1PR3Q99500 378 aa12.69□□□□□ -0.38
MBD1-203ENST00000339998 SCRT1Q9BWW7 348 aa12.69□□□□□ -0.38
MBD1-203ENST00000339998 CELSR1Q9NYQ6 3014 aa12.68□□□□□ -0.38
MBD1-203ENST00000339998 ELLP55199 621 aaPredicted RBP12.68□□□□□ -0.38
MBD1-203ENST00000339998 MSMO1Q15800 293 aa12.68□□□□□ -0.38
MBD1-203ENST00000339998 UQCC3Q6UW78 93 aa12.68□□□□□ -0.38
MBD1-203ENST00000339998 ZNF439Q8NDP4 499 aa12.68□□□□□ -0.38
MBD1-203ENST00000339998 HMGB3O15347 200 aaKnown RBP12.68□□□□□ -0.38
MBD1-203ENST00000339998 SSX7Q7RTT5 188 aa12.68□□□□□ -0.38
MBD1-203ENST00000339998 LYPD6BQ8NI32 183 aa12.68□□□□□ -0.38
MBD1-203ENST00000339998 IGHV1-69-2A0A0G2JMI3 117 aa12.67□□□□□ -0.38
MBD1-203ENST00000339998 NKX6-3A6NJ46 265 aa12.67□□□□□ -0.38
MBD1-203ENST00000339998 RAB29O14966 203 aa12.67□□□□□ -0.38
MBD1-203ENST00000339998 CD5P06127 495 aa12.67□□□□□ -0.38
MBD1-203ENST00000339998 FBP1P09467 338 aa12.67□□□□□ -0.38
MBD1-203ENST00000339998 SLC38A11Q08AI6 406 aa12.67□□□□□ -0.38
MBD1-203ENST00000339998 GUK1Q16774 197 aa12.67□□□□□ -0.38
MBD1-203ENST00000339998 CBLN2Q8IUK8 224 aa12.67□□□□□ -0.38
MBD1-203ENST00000339998 SFT2D1Q8WV19 159 aa12.67□□□□□ -0.38
MBD1-203ENST00000339998 NKX6-2Q9C056 277 aaPredicted RBP12.67□□□□□ -0.38
MBD1-203ENST00000339998 NAV3Q8IVL0 2385 aa12.67□□□□□ -0.38
MBD1-203ENST00000339998 CSMD2Q7Z408 3487 aa12.67□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 73.3 ms