RNA–Protein interactions for RNA: ENST00000339701.7

CSMD3-202, Transcript of CUB and Sushi multiple domains 3, humanhuman

TSL 1 (best)

Gene CSMD3, Length 10,773 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD3-202ENST00000339701 ZNF511Q8NB15 262 aa2.86□□□□□ -1.95
CSMD3-202ENST00000339701 OR52I1Q8NGK6 324 aa2.86□□□□□ -1.95
CSMD3-202ENST00000339701 TM4SF19Q96DZ7 209 aa2.86□□□□□ -1.95
CSMD3-202ENST00000339701 ZMAT3Q9HA38 289 aaKnown RBP2.86□□□□□ -1.95
CSMD3-202ENST00000339701 RPRMQ9NS64 109 aa2.86□□□□□ -1.95
CSMD3-202ENST00000339701 TRAV20A0A0B4J274 112 aa2.86□□□□□ -1.95
CSMD3-202ENST00000339701 A0A1B0GWA3 101 aa2.86□□□□□ -1.95
CSMD3-202ENST00000339701 CDIPTO14735 213 aa2.86□□□□□ -1.95
CSMD3-202ENST00000339701 MMP23AO75900 390 aa2.86□□□□□ -1.95
CSMD3-202ENST00000339701 NKX2-2O95096 273 aa2.86□□□□□ -1.95
CSMD3-202ENST00000339701 TMEM11P17152 192 aa2.86□□□□□ -1.95
CSMD3-202ENST00000339701 HRH1P35367 487 aa2.86□□□□□ -1.95
CSMD3-202ENST00000339701 VDAC2P45880 294 aaPredicted RBP2.86□□□□□ -1.95
CSMD3-202ENST00000339701 IL15RAQ13261 267 aa2.86□□□□□ -1.95
CSMD3-202ENST00000339701 TMEM78Q5T7P6 136 aa2.86□□□□□ -1.95
CSMD3-202ENST00000339701 AMER3Q8N944 861 aa2.86□□□□□ -1.95
CSMD3-202ENST00000339701 RPP25Q9BUL9 199 aaKnown RBP2.86□□□□□ -1.95
CSMD3-202ENST00000339701 PLAC1Q9HBJ0 212 aa2.86□□□□□ -1.95
CSMD3-202ENST00000339701 MTCH1Q9NZJ7 389 aa2.86□□□□□ -1.95
CSMD3-202ENST00000339701 BDP1A6H8Y1 2624 aa2.86□□□□□ -1.95
CSMD3-202ENST00000339701 OOSP1A8MZH6 123 aa2.86□□□□□ -1.95
CSMD3-202ENST00000339701 TMEM238C9JI98 176 aa2.86□□□□□ -1.95
CSMD3-202ENST00000339701 MOSPD3O75425 235 aa2.86□□□□□ -1.95
CSMD3-202ENST00000339701 LGALS1P09382 135 aaKnown RBP2.86□□□□□ -1.95
CSMD3-202ENST00000339701 OR9G9P0C7N8 305 aa2.86□□□□□ -1.95
CSMD3-202ENST00000339701 AGAP20933 346 aa2.86□□□□□ -1.95
CSMD3-202ENST00000339701 TUSC1Q2TAM9 212 aa2.86□□□□□ -1.95
CSMD3-202ENST00000339701 MOB3CQ70IA8 216 aa2.86□□□□□ -1.95
CSMD3-202ENST00000339701 TUSC5Q8IXB3 177 aa2.86□□□□□ -1.95
CSMD3-202ENST00000339701 DEFB108BQ8NET1 73 aa2.86□□□□□ -1.95
CSMD3-202ENST00000339701 FDCSPQ8NFU4 85 aa2.86□□□□□ -1.95
CSMD3-202ENST00000339701 NEIL2Q969S2 332 aa2.86□□□□□ -1.95
CSMD3-202ENST00000339701 C7orf69Q9H7B7 122 aa2.86□□□□□ -1.95
CSMD3-202ENST00000339701 NOTCH2Q04721 2471 aa2.85□□□□□ -1.95
CSMD3-202ENST00000339701 TRAV9-2A0A087WT02 112 aa2.85□□□□□ -1.95
CSMD3-202ENST00000339701 hCG_38984A0A1B0GV85 526 aa2.85□□□□□ -1.95
CSMD3-202ENST00000339701 EML2O95834 649 aa2.85□□□□□ -1.95
CSMD3-202ENST00000339701 CA2P00918 260 aa2.85□□□□□ -1.95
CSMD3-202ENST00000339701 SFTA3P0C7M3 94 aa2.85□□□□□ -1.95
CSMD3-202ENST00000339701 MUC1P15941 1255 aaPredicted RBP2.85□□□□□ -1.95
CSMD3-202ENST00000339701 PMS2P11Q13670 270 aa2.85□□□□□ -1.95
CSMD3-202ENST00000339701 RHBDD2Q6NTF9 364 aa2.85□□□□□ -1.95
CSMD3-202ENST00000339701 STAC2Q6ZMT1 411 aa2.85□□□□□ -1.95
CSMD3-202ENST00000339701 VKORC1L1Q8N0U8 176 aa2.85□□□□□ -1.95
CSMD3-202ENST00000339701 OR10V1Q8NGI7 309 aa2.85□□□□□ -1.95
CSMD3-202ENST00000339701 SNX22Q96L94 193 aa2.85□□□□□ -1.95
CSMD3-202ENST00000339701 PRSS22Q9GZN4 317 aa2.85□□□□□ -1.95
CSMD3-202ENST00000339701 TBC1D29Q9UFV1 150 aa2.85□□□□□ -1.95
CSMD3-202ENST00000339701 AUP1Q9Y679 476 aa2.85□□□□□ -1.95
CSMD3-202ENST00000339701 TRBV5-4A0A0C4DH59 114 aa2.85□□□□□ -1.95
CSMD3-202ENST00000339701 C11orf94C9JXX5 98 aa2.85□□□□□ -1.95
CSMD3-202ENST00000339701 UTS2O95399 124 aa2.85□□□□□ -1.95
CSMD3-202ENST00000339701 IFITM3Q01628 133 aa2.85□□□□□ -1.95
CSMD3-202ENST00000339701 SLC38A11Q08AI6 406 aa2.85□□□□□ -1.95
CSMD3-202ENST00000339701 GPNMBQ14956 572 aa2.85□□□□□ -1.95
CSMD3-202ENST00000339701 GAB4Q2WGN9 574 aa2.85□□□□□ -1.95
CSMD3-202ENST00000339701 Q6ZVH6 145 aa2.85□□□□□ -1.95
CSMD3-202ENST00000339701 SAP25Q8TEE9 199 aa2.85□□□□□ -1.95
CSMD3-202ENST00000339701 Q96MF0 132 aa2.85□□□□□ -1.95
CSMD3-202ENST00000339701 MED29Q9NX70 200 aa2.85□□□□□ -1.95
CSMD3-202ENST00000339701 C2CD3Q4AC94 2353 aa2.85□□□□□ -1.95
CSMD3-202ENST00000339701 IGHA1P01876 353 aa2.85□□□□□ -1.95
CSMD3-202ENST00000339701 IGHA2P01877 340 aa2.85□□□□□ -1.95
CSMD3-202ENST00000339701 HLA-DQB1P01920 261 aa2.85□□□□□ -1.95
CSMD3-202ENST00000339701 CD74P04233 296 aa2.85□□□□□ -1.95
CSMD3-202ENST00000339701 ERVK11-1P61568 191 aa2.85□□□□□ -1.95
CSMD3-202ENST00000339701 DLEU7Q6UYE1 221 aa2.85□□□□□ -1.95
CSMD3-202ENST00000339701 LINC01356Q8N9X3 169 aa2.85□□□□□ -1.95
CSMD3-202ENST00000339701 OR9Q2Q8NGE9 314 aa2.85□□□□□ -1.95
CSMD3-202ENST00000339701 FYTTD1Q96QD9 318 aaKnown RBP2.85□□□□□ -1.95
CSMD3-202ENST00000339701 IGLV3-27P01718 113 aa2.85□□□□□ -1.95
CSMD3-202ENST00000339701 IGHV3-9P01782 118 aa2.85□□□□□ -1.95
CSMD3-202ENST00000339701 FAM157BP0CG42 384 aa2.85□□□□□ -1.95
CSMD3-202ENST00000339701 HKR1P10072 659 aa2.85□□□□□ -1.95
CSMD3-202ENST00000339701 PDE6GP18545 87 aa2.85□□□□□ -1.95
CSMD3-202ENST00000339701 FNDC7Q5VTL7 733 aa2.85□□□□□ -1.95
CSMD3-202ENST00000339701 LHFPL4Q7Z7J7 247 aa2.85□□□□□ -1.95
CSMD3-202ENST00000339701 NIT1Q86X76 327 aa2.85□□□□□ -1.95
CSMD3-202ENST00000339701 LURAP1LQ8IV03 231 aa2.85□□□□□ -1.95
CSMD3-202ENST00000339701 Q8NFD4 153 aa2.85□□□□□ -1.95
CSMD3-202ENST00000339701 OR4A5Q8NH83 315 aa2.85□□□□□ -1.95
CSMD3-202ENST00000339701 RNASEH2CQ8TDP1 164 aaKnown RBP2.85□□□□□ -1.95
CSMD3-202ENST00000339701 ZFYVE26Q68DK2 2539 aa2.85□□□□□ -1.95
CSMD3-202ENST00000339701 TMEM229AB2RXF0 380 aa2.85□□□□□ -1.95
CSMD3-202ENST00000339701 DHHO43323 396 aa2.85□□□□□ -1.95
CSMD3-202ENST00000339701 SFT2D2O95562 160 aa2.85□□□□□ -1.95
CSMD3-202ENST00000339701 ARG1P05089 322 aa2.85□□□□□ -1.95
CSMD3-202ENST00000339701 ERGP11308 486 aa2.85□□□□□ -1.95
CSMD3-202ENST00000339701 SNRPD3P62318 126 aaKnown RBP2.85□□□□□ -1.95
CSMD3-202ENST00000339701 EXOSC7Q15024 291 aaKnown RBP2.85□□□□□ -1.95
CSMD3-202ENST00000339701 TEX37Q96LM6 180 aa2.85□□□□□ -1.95
CSMD3-202ENST00000339701 MBNL1Q9NR56 388 aaKnown RBP2.85□□□□□ -1.95
CSMD3-202ENST00000339701 CYSLTR1Q9Y271 337 aa2.85□□□□□ -1.95
CSMD3-202ENST00000339701 MRPS18CQ9Y3D5 142 aaKnown RBP2.85□□□□□ -1.95
CSMD3-202ENST00000339701 J3QR06 171 aa2.85□□□□□ -1.95
CSMD3-202ENST00000339701 GNG7O60262 68 aa2.85□□□□□ -1.95
CSMD3-202ENST00000339701 ALOX5APP20292 161 aa2.85□□□□□ -1.95
CSMD3-202ENST00000339701 IGFBP6P24592 240 aaPredicted RBP2.85□□□□□ -1.95
CSMD3-202ENST00000339701 DDTP30046 118 aa2.85□□□□□ -1.95
CSMD3-202ENST00000339701 C3orf36Q3SXR2 165 aa2.85□□□□□ -1.95
Retrieved 100 of 20,778 RNA–protein pairs in 74.9 ms