RNA–Protein interactions for RNA: ENST00000338468.7

PRKN-201, Transcript of parkin RBR E3 ubiquitin protein ligase, humanhuman

TSL 1 (best) BASIC

Gene PRKN, Length 1,276 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKN-201ENST00000338468 DEFB136Q30KP8 78 aa11.89□□□□□ -0.51
PRKN-201ENST00000338468 TMEM69Q5SWH9 247 aa11.89□□□□□ -0.51
PRKN-201ENST00000338468 ZNF562Q6V9R5 426 aa11.89□□□□□ -0.51
PRKN-201ENST00000338468 ADTRPQ96IZ2 230 aa11.89□□□□□ -0.51
PRKN-201ENST00000338468 FAM103A1Q9BTL3 118 aaKnown RBP11.89□□□□□ -0.51
PRKN-201ENST00000338468 COMMD3Q9UBI1 195 aa11.89□□□□□ -0.51
PRKN-201ENST00000338468 AADACP22760 399 aa11.88□□□□□ -0.51
PRKN-201ENST00000338468 MYCNOSP40205 109 aa11.88□□□□□ -0.51
PRKN-201ENST00000338468 CBX5P45973 191 aa11.88□□□□□ -0.51
PRKN-201ENST00000338468 BRWD1-AS2P59051 145 aa11.88□□□□□ -0.51
PRKN-201ENST00000338468 ARPC4P59998 168 aa11.88□□□□□ -0.51
PRKN-201ENST00000338468 RTL8BQ17RB0 113 aa11.88□□□□□ -0.51
PRKN-201ENST00000338468 ECSCRQ19T08 205 aa11.88□□□□□ -0.51
PRKN-201ENST00000338468 PPP1R27Q86WC6 154 aa11.88□□□□□ -0.51
PRKN-201ENST00000338468 ZNF491Q8N8L2 437 aa11.88□□□□□ -0.51
PRKN-201ENST00000338468 HARBI1Q96MB7 349 aa11.88□□□□□ -0.51
PRKN-201ENST00000338468 GNB4Q9HAV0 340 aa11.88□□□□□ -0.51
PRKN-201ENST00000338468 A3GALT2U3KPV4 340 aa11.88□□□□□ -0.51
PRKN-201ENST00000338468 CCL24O00175 119 aa11.87□□□□□ -0.51
PRKN-201ENST00000338468 SHOXO15266 292 aa11.87□□□□□ -0.51
PRKN-201ENST00000338468 HPGDSO60760 199 aa11.87□□□□□ -0.51
PRKN-201ENST00000338468 CRYZL1O95825 349 aa11.87□□□□□ -0.51
PRKN-201ENST00000338468 APOA1P02647 267 aa11.87□□□□□ -0.51
PRKN-201ENST00000338468 RRASP10301 218 aa11.87□□□□□ -0.51
PRKN-201ENST00000338468 NAT1P18440 290 aa11.87□□□□□ -0.51
PRKN-201ENST00000338468 ELK1P19419 428 aa11.87□□□□□ -0.51
PRKN-201ENST00000338468 FCGR2CP31995 323 aa11.87□□□□□ -0.51
PRKN-201ENST00000338468 RORCP51449 518 aa11.87□□□□□ -0.51
PRKN-201ENST00000338468 OVCH2Q7RTZ1 564 aa11.87□□□□□ -0.51
PRKN-201ENST00000338468 OR5AP2Q8NGF4 316 aa11.87□□□□□ -0.51
PRKN-201ENST00000338468 CASTOR1Q8WTX7 329 aa11.87□□□□□ -0.51
PRKN-201ENST00000338468 C4orf3Q8WVX3 66 aa11.87□□□□□ -0.51
PRKN-201ENST00000338468 ACOT12Q8WYK0 555 aa11.87□□□□□ -0.51
PRKN-201ENST00000338468 CMTM3Q96MX0 182 aa11.87□□□□□ -0.51
PRKN-201ENST00000338468 GPHA2Q96T91 129 aa11.87□□□□□ -0.51
PRKN-201ENST00000338468 NECAP2Q9NVZ3 263 aa11.87□□□□□ -0.51
PRKN-201ENST00000338468 FOXA2Q9Y261 457 aaPredicted RBP11.87□□□□□ -0.51
PRKN-201ENST00000338468 A0A1W2PN81 502 aa11.86□□□□□ -0.51
PRKN-201ENST00000338468 SLC22A5O76082 557 aa11.86□□□□□ -0.51
PRKN-201ENST00000338468 PPYP01298 95 aa11.86□□□□□ -0.51
PRKN-201ENST00000338468 CHRNA7P36544 502 aa11.86□□□□□ -0.51
PRKN-201ENST00000338468 RAB9AP51151 201 aa11.86□□□□□ -0.51
PRKN-201ENST00000338468 FXYD3Q14802 87 aa11.86□□□□□ -0.51
PRKN-201ENST00000338468 AKIRIN2Q53H80 203 aa11.86□□□□□ -0.51
PRKN-201ENST00000338468 FOXB2Q5VYV0 432 aa11.86□□□□□ -0.51
PRKN-201ENST00000338468 KCTD9Q7L273 389 aa11.86□□□□□ -0.51
PRKN-201ENST00000338468 LFNGQ8NES3 379 aa11.86□□□□□ -0.51
PRKN-201ENST00000338468 ABHD5Q8WTS1 349 aa11.86□□□□□ -0.51
PRKN-201ENST00000338468 ARPC1AQ92747 370 aa11.86□□□□□ -0.51
PRKN-201ENST00000338468 RCC1LQ96I51 464 aaKnown RBP11.86□□□□□ -0.51
PRKN-201ENST00000338468 UBE2E2Q96LR5 201 aa11.86□□□□□ -0.51
PRKN-201ENST00000338468 CCL28Q9NRJ3 127 aa11.86□□□□□ -0.51
PRKN-201ENST00000338468 I3L521 148 aa11.85□□□□□ -0.51
PRKN-201ENST00000338468 FCGR3BO75015 233 aa11.85□□□□□ -0.51
PRKN-201ENST00000338468 PRSS3P35030 304 aa11.85□□□□□ -0.51
PRKN-201ENST00000338468 UBE2KP61086 200 aa11.85□□□□□ -0.51
PRKN-201ENST00000338468 CBX3Q13185 183 aa11.85□□□□□ -0.51
PRKN-201ENST00000338468 FHL3Q13643 280 aa11.85□□□□□ -0.51
PRKN-201ENST00000338468 CDK10Q15131 360 aa11.85□□□□□ -0.51
PRKN-201ENST00000338468 OR2B11Q5JQS5 317 aa11.85□□□□□ -0.51
PRKN-201ENST00000338468 ASPHD1Q5U4P2 390 aa11.85□□□□□ -0.51
PRKN-201ENST00000338468 TMEM65Q6PI78 240 aa11.85□□□□□ -0.51
PRKN-201ENST00000338468 UNQ5815/PRO19632Q6UWF5 114 aa11.85□□□□□ -0.51
PRKN-201ENST00000338468 IDO2Q6ZQW0 420 aa11.85□□□□□ -0.51
PRKN-201ENST00000338468 GPR141Q7Z602 305 aa11.85□□□□□ -0.51
PRKN-201ENST00000338468 LYSMD2Q8IV50 215 aa11.85□□□□□ -0.51
PRKN-201ENST00000338468 MFSD4AQ8N468 514 aa11.85□□□□□ -0.51
PRKN-201ENST00000338468 TCTEX1D1Q8N7M0 179 aa11.85□□□□□ -0.51
PRKN-201ENST00000338468 TEX45Q8NA69 505 aa11.85□□□□□ -0.51
PRKN-201ENST00000338468 GRPEL2Q8TAA5 225 aa11.85□□□□□ -0.51
PRKN-201ENST00000338468 OSR1Q8TAX0 266 aaPredicted RBP11.85□□□□□ -0.51
PRKN-201ENST00000338468 GPX8Q8TED1 209 aa11.85□□□□□ -0.51
PRKN-201ENST00000338468 GIMAP1Q8WWP7 306 aa11.85□□□□□ -0.51
PRKN-201ENST00000338468 HSD17B10Q99714 261 aaKnown RBP11.85□□□□□ -0.51
PRKN-201ENST00000338468 IFT46Q9NQC8 304 aa11.85□□□□□ -0.51
PRKN-201ENST00000338468 TAS2R8Q9NYW2 309 aa11.85□□□□□ -0.51
PRKN-201ENST00000338468 SAA1P0DJI8 122 aaPredicted RBP11.84□□□□□ -0.51
PRKN-201ENST00000338468 ZNF182P17025 639 aaPredicted RBP11.84□□□□□ -0.51
PRKN-201ENST00000338468 RFX2P48378 723 aa11.84□□□□□ -0.51
PRKN-201ENST00000338468 GNB1P62873 340 aa11.84□□□□□ -0.51
PRKN-201ENST00000338468 RUNX1Q01196 453 aa11.84□□□□□ -0.51
PRKN-201ENST00000338468 TMEM267Q0VDI3 215 aaPredicted RBP11.84□□□□□ -0.51
PRKN-201ENST00000338468 SPCS2Q15005 226 aa11.84□□□□□ -0.51
PRKN-201ENST00000338468 MSMO1Q15800 293 aa11.84□□□□□ -0.51
PRKN-201ENST00000338468 PRSS8Q16651 343 aa11.84□□□□□ -0.51
PRKN-201ENST00000338468 ACTBL2Q562R1 376 aa11.84□□□□□ -0.51
PRKN-201ENST00000338468 VAX1Q5SQQ9 334 aa11.84□□□□□ -0.51
PRKN-201ENST00000338468 DHRS11Q6UWP2 260 aa11.84□□□□□ -0.51
PRKN-201ENST00000338468 SECTM1Q8WVN6 248 aa11.84□□□□□ -0.51
PRKN-201ENST00000338468 VSIG4Q9Y279 399 aa11.84□□□□□ -0.51
PRKN-201ENST00000338468 MRPS7Q9Y2R9 242 aaKnown RBP11.84□□□□□ -0.51
PRKN-201ENST00000338468 TNCP24821 2201 aa11.84□□□□□ -0.51
PRKN-201ENST00000338468 PMP2P02689 132 aa11.83□□□□□ -0.52
PRKN-201ENST00000338468 FXYD4P59646 89 aa11.83□□□□□ -0.52
PRKN-201ENST00000338468 KRTAP10-11P60412 298 aa11.83□□□□□ -0.52
PRKN-201ENST00000338468 DYRK1AQ13627 763 aa11.83□□□□□ -0.52
PRKN-201ENST00000338468 VMA21Q3ZAQ7 101 aa11.83□□□□□ -0.52
PRKN-201ENST00000338468 ZNF66Q6ZN08 573 aa11.83□□□□□ -0.52
PRKN-201ENST00000338468 SNX29P2Q8IUI4 249 aa11.83□□□□□ -0.52
PRKN-201ENST00000338468 OR5M8Q8NGP6 311 aa11.83□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms