RNA–Protein interactions for RNA: ENST00000338399.8

CDK5RAP3-201, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDK5RAP3, Length 1,866 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-201ENST00000338399 S100A10P60903 97 aa11.97□□□□□ -0.49
CDK5RAP3-201ENST00000338399 C11orf87Q6NUJ2 197 aa11.97□□□□□ -0.49
CDK5RAP3-201ENST00000338399 Q6ZRM9 215 aa11.97□□□□□ -0.49
CDK5RAP3-201ENST00000338399 TGIF2LXQ8IUE1 241 aa11.97□□□□□ -0.49
CDK5RAP3-201ENST00000338399 OR4S2Q8NH73 311 aa11.97□□□□□ -0.49
CDK5RAP3-201ENST00000338399 TBX15Q96SF7 602 aa11.97□□□□□ -0.49
CDK5RAP3-201ENST00000338399 NABP2Q9BQ15 211 aa11.97□□□□□ -0.49
CDK5RAP3-201ENST00000338399 PLEKHA2Q9HB19 425 aa11.97□□□□□ -0.49
CDK5RAP3-201ENST00000338399 SLC35D1Q9NTN3 355 aa11.97□□□□□ -0.49
CDK5RAP3-201ENST00000338399 AMMECR1Q9Y4X0 333 aaPredicted RBP11.97□□□□□ -0.49
CDK5RAP3-201ENST00000338399 APCP25054 2843 aa11.97□□□□□ -0.49
CDK5RAP3-201ENST00000338399 A0A096LNT2 108 aa11.96□□□□□ -0.49
CDK5RAP3-201ENST00000338399 RNASEK-C17orf49H0YIS7 233 aa11.96□□□□□ -0.49
CDK5RAP3-201ENST00000338399 ATG12O94817 140 aa11.96□□□□□ -0.49
CDK5RAP3-201ENST00000338399 SLC7A5P1Q8MH63 180 aa11.96□□□□□ -0.49
CDK5RAP3-201ENST00000338399 OR4D5Q8NGN0 318 aa11.96□□□□□ -0.49
CDK5RAP3-201ENST00000338399 THAP6Q8TBB0 222 aa11.96□□□□□ -0.49
CDK5RAP3-201ENST00000338399 R3HDM4Q96D70 268 aa11.96□□□□□ -0.49
CDK5RAP3-201ENST00000338399 MBD2Q9UBB5 411 aa11.96□□□□□ -0.49
CDK5RAP3-201ENST00000338399 BOLA1Q9Y3E2 137 aa11.96□□□□□ -0.49
CDK5RAP3-201ENST00000338399 MMP24Q9Y5R2 645 aa11.96□□□□□ -0.49
CDK5RAP3-201ENST00000338399 A0A1B0GU03 582 aa11.95□□□□□ -0.5
CDK5RAP3-201ENST00000338399 MARCH11A6NNE9 402 aa11.95□□□□□ -0.5
CDK5RAP3-201ENST00000338399 H0YIZ8 118 aa11.95□□□□□ -0.5
CDK5RAP3-201ENST00000338399 H0YJW9 148 aa11.95□□□□□ -0.5
CDK5RAP3-201ENST00000338399 MBPP02686 304 aaPredicted RBP11.95□□□□□ -0.5
CDK5RAP3-201ENST00000338399 IFITM2Q01629 132 aa11.95□□□□□ -0.5
CDK5RAP3-201ENST00000338399 LDLRAD2Q5SZI1 272 aa11.95□□□□□ -0.5
CDK5RAP3-201ENST00000338399 LAMTOR1Q6IAA8 161 aa11.95□□□□□ -0.5
CDK5RAP3-201ENST00000338399 OR5AN1Q8NGI8 311 aa11.95□□□□□ -0.5
CDK5RAP3-201ENST00000338399 RNF126Q9BV68 326 aa11.95□□□□□ -0.5
CDK5RAP3-201ENST00000338399 CACNG5Q9UF02 275 aa11.95□□□□□ -0.5
CDK5RAP3-201ENST00000338399 LSM5Q9Y4Y9 91 aaKnown RBP11.95□□□□□ -0.5
CDK5RAP3-201ENST00000338399 ODF3BA8MYP8 253 aa11.95□□□□□ -0.5
CDK5RAP3-201ENST00000338399 RNF223E7ERA6 249 aa11.95□□□□□ -0.5
CDK5RAP3-201ENST00000338399 LY6LH3BQJ8 138 aa11.95□□□□□ -0.5
CDK5RAP3-201ENST00000338399 H7C2Y5 167 aa11.95□□□□□ -0.5
CDK5RAP3-201ENST00000338399 NXPH3O95157 252 aa11.95□□□□□ -0.5
CDK5RAP3-201ENST00000338399 APOA2P02652 100 aa11.95□□□□□ -0.5
CDK5RAP3-201ENST00000338399 IGKV1-16P04430 117 aa11.95□□□□□ -0.5
CDK5RAP3-201ENST00000338399 MSMBP08118 114 aa11.95□□□□□ -0.5
CDK5RAP3-201ENST00000338399 SLC25A4P12235 298 aa11.95□□□□□ -0.5
CDK5RAP3-201ENST00000338399 SLC25A6P12236 298 aa11.95□□□□□ -0.5
CDK5RAP3-201ENST00000338399 HTR1DP28221 377 aa11.95□□□□□ -0.5
CDK5RAP3-201ENST00000338399 PAX8Q06710 450 aa11.95□□□□□ -0.5
CDK5RAP3-201ENST00000338399 SMCO1Q147U7 214 aa11.95□□□□□ -0.5
CDK5RAP3-201ENST00000338399 RTL8BQ17RB0 113 aa11.95□□□□□ -0.5
CDK5RAP3-201ENST00000338399 SSX9Q7RTT3 188 aa11.95□□□□□ -0.5
CDK5RAP3-201ENST00000338399 H2BFWTQ7Z2G1 175 aa11.95□□□□□ -0.5
CDK5RAP3-201ENST00000338399 VKORC1L1Q8N0U8 176 aa11.95□□□□□ -0.5
CDK5RAP3-201ENST00000338399 C9orf62Q8N4C0 152 aa11.95□□□□□ -0.5
CDK5RAP3-201ENST00000338399 DMBX1Q8NFW5 382 aa11.95□□□□□ -0.5
CDK5RAP3-201ENST00000338399 OR1S1Q8NH92 325 aa11.95□□□□□ -0.5
CDK5RAP3-201ENST00000338399 C17orf50Q8WW18 174 aa11.95□□□□□ -0.5
CDK5RAP3-201ENST00000338399 LHX4Q969G2 390 aa11.95□□□□□ -0.5
CDK5RAP3-201ENST00000338399 RPEQ96AT9 228 aa11.95□□□□□ -0.5
CDK5RAP3-201ENST00000338399 PLSCR3Q9NRY6 295 aa11.95□□□□□ -0.5
CDK5RAP3-201ENST00000338399 OR5AC2Q9NZP5 309 aa11.95□□□□□ -0.5
CDK5RAP3-201ENST00000338399 ARPC5O15511 151 aa11.94□□□□□ -0.5
CDK5RAP3-201ENST00000338399 GAPDHP04406 335 aaKnown RBP11.94□□□□□ -0.5
CDK5RAP3-201ENST00000338399 P0C879 139 aa11.94□□□□□ -0.5
CDK5RAP3-201ENST00000338399 NQO2P16083 231 aa11.94□□□□□ -0.5
CDK5RAP3-201ENST00000338399 NKX2-1P43699 371 aaPredicted RBP11.94□□□□□ -0.5
CDK5RAP3-201ENST00000338399 LGALSLQ3ZCW2 172 aaPredicted RBP11.94□□□□□ -0.5
CDK5RAP3-201ENST00000338399 CXorf66Q5JRM2 361 aaPredicted RBP11.94□□□□□ -0.5
CDK5RAP3-201ENST00000338399 LHFPL4Q7Z7J7 247 aa11.94□□□□□ -0.5
CDK5RAP3-201ENST00000338399 ZNF546Q86UE3 836 aa11.94□□□□□ -0.5
CDK5RAP3-201ENST00000338399 MAPK1IP1LQ8NDC0 245 aa11.94□□□□□ -0.5
CDK5RAP3-201ENST00000338399 DPM3Q9P2X0 92 aa11.94□□□□□ -0.5
CDK5RAP3-201ENST00000338399 HSPB11Q9Y547 144 aa11.94□□□□□ -0.5
CDK5RAP3-201ENST00000338399 NAV2Q8IVL1 2488 aa11.94□□□□□ -0.5
CDK5RAP3-201ENST00000338399 HMSDA8MTL9 139 aa11.93□□□□□ -0.5
CDK5RAP3-201ENST00000338399 LEUTXA8MZ59 168 aa11.93□□□□□ -0.5
CDK5RAP3-201ENST00000338399 B4DSR2 109 aa11.93□□□□□ -0.5
CDK5RAP3-201ENST00000338399 K7EPK0 472 aa11.93□□□□□ -0.5
CDK5RAP3-201ENST00000338399 PITX3O75364 302 aa11.93□□□□□ -0.5
CDK5RAP3-201ENST00000338399 ERVK-16P61578 105 aa11.93□□□□□ -0.5
CDK5RAP3-201ENST00000338399 TAGLNQ01995 201 aaKnown RBP11.93□□□□□ -0.5
CDK5RAP3-201ENST00000338399 TPTE2P1Q5T6R2 138 aa11.93□□□□□ -0.5
CDK5RAP3-201ENST00000338399 DHRS7BQ6IAN0 325 aaPredicted RBP11.93□□□□□ -0.5
CDK5RAP3-201ENST00000338399 PRSS54Q6PEW0 395 aa11.93□□□□□ -0.5
CDK5RAP3-201ENST00000338399 PRSS57Q6UWY2 283 aa11.93□□□□□ -0.5
CDK5RAP3-201ENST00000338399 KRTAP1-3Q8IUG1 177 aa11.93□□□□□ -0.5
CDK5RAP3-201ENST00000338399 FAM71E2Q8N5Q1 922 aa11.93□□□□□ -0.5
CDK5RAP3-201ENST00000338399 DCUN1D4Q92564 292 aa11.93□□□□□ -0.5
CDK5RAP3-201ENST00000338399 Q96MF0 132 aa11.93□□□□□ -0.5
CDK5RAP3-201ENST00000338399 REG4Q9BYZ8 158 aa11.93□□□□□ -0.5
CDK5RAP3-201ENST00000338399 FASNP49327 2511 aaKnown RBP11.93□□□□□ -0.5
CDK5RAP3-201ENST00000338399 IGHV3-72A0A0B4J1Y9 119 aa11.93□□□□□ -0.5
CDK5RAP3-201ENST00000338399 IGHV1-3A0A0C4DH29 117 aa11.93□□□□□ -0.5
CDK5RAP3-201ENST00000338399 ST8SIA3O43173 380 aa11.93□□□□□ -0.5
CDK5RAP3-201ENST00000338399 KCNAB3O43448 404 aa11.93□□□□□ -0.5
CDK5RAP3-201ENST00000338399 RLN2P04090 185 aa11.93□□□□□ -0.5
CDK5RAP3-201ENST00000338399 PET100P0DJ07 73 aa11.93□□□□□ -0.5
CDK5RAP3-201ENST00000338399 RRASP10301 218 aa11.93□□□□□ -0.5
CDK5RAP3-201ENST00000338399 CXCL2P19875 107 aa11.93□□□□□ -0.5
CDK5RAP3-201ENST00000338399 LOXL1Q08397 574 aaPredicted RBP11.93□□□□□ -0.5
CDK5RAP3-201ENST00000338399 MIDNQ504T8 468 aa11.93□□□□□ -0.5
CDK5RAP3-201ENST00000338399 MOB3BQ86TA1 216 aa11.93□□□□□ -0.5
CDK5RAP3-201ENST00000338399 C1orf159Q96HA4 380 aa11.93□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 37.7 ms