RNA–Protein interactions for RNA: ENST00000317516.11

TPM1-203, Transcript of tropomyosin 1, humanhuman

TSL 1 (best) BASIC

Gene TPM1, Length 738 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-203ENST00000317516 A0A087WW49 117 aa13.72□□□□□ -0.21
TPM1-203ENST00000317516 C13orf42A0A1B0GVH6 325 aa13.72□□□□□ -0.21
TPM1-203ENST00000317516 SMIM30A4D0T7 59 aa13.72□□□□□ -0.21
TPM1-203ENST00000317516 IGLV2-23P01705 113 aa13.72□□□□□ -0.21
TPM1-203ENST00000317516 IGHV3-11P01762 117 aa13.72□□□□□ -0.21
TPM1-203ENST00000317516 SLURP1P55000 103 aa13.72□□□□□ -0.21
TPM1-203ENST00000317516 VMA21Q3ZAQ7 101 aa13.72□□□□□ -0.21
TPM1-203ENST00000317516 POC5Q8NA72 575 aa13.72□□□□□ -0.21
TPM1-203ENST00000317516 OR5T1Q8NG75 326 aa13.72□□□□□ -0.21
TPM1-203ENST00000317516 TPSG1Q9NRR2 321 aa13.72□□□□□ -0.21
TPM1-203ENST00000317516 RRP15Q9Y3B9 282 aaKnown RBP13.72□□□□□ -0.21
TPM1-203ENST00000317516 SLC22A5O76082 557 aa13.71□□□□□ -0.21
TPM1-203ENST00000317516 CRYGBP07316 175 aa13.71□□□□□ -0.21
TPM1-203ENST00000317516 TEX45Q8NA69 505 aa13.71□□□□□ -0.21
TPM1-203ENST00000317516 OR4C12Q96R67 309 aa13.71□□□□□ -0.21
TPM1-203ENST00000317516 ELOVL1Q9BW60 279 aa13.71□□□□□ -0.21
TPM1-203ENST00000317516 RANGRFQ9HD47 186 aaPredicted RBP13.71□□□□□ -0.21
TPM1-203ENST00000317516 ZP3P21754 424 aa13.7□□□□□ -0.22
TPM1-203ENST00000317516 DUTP33316 252 aaKnown RBP13.7□□□□□ -0.22
TPM1-203ENST00000317516 GNG2P59768 71 aa13.7□□□□□ -0.22
TPM1-203ENST00000317516 PJVKQ0ZLH3 352 aa13.7□□□□□ -0.22
TPM1-203ENST00000317516 ACSM6Q6P461 480 aa13.7□□□□□ -0.22
TPM1-203ENST00000317516 SFXN4Q6P4A7 337 aa13.7□□□□□ -0.22
TPM1-203ENST00000317516 CNIH2Q6PI25 160 aa13.7□□□□□ -0.22
TPM1-203ENST00000317516 ZNF773Q6PK81 442 aa13.7□□□□□ -0.22
TPM1-203ENST00000317516 OR6Q1Q8NGQ2 317 aa13.7□□□□□ -0.22
TPM1-203ENST00000317516 OSR1Q8TAX0 266 aaPredicted RBP13.7□□□□□ -0.22
TPM1-203ENST00000317516 WWC2-AS2Q96NR7 200 aa13.7□□□□□ -0.22
TPM1-203ENST00000317516 PHB2Q99623 299 aa13.7□□□□□ -0.22
TPM1-203ENST00000317516 ELF5Q9UKW6 265 aaPredicted RBP13.7□□□□□ -0.22
TPM1-203ENST00000317516 PRELID3BQ9Y3B1 194 aa13.7□□□□□ -0.22
TPM1-203ENST00000317516 OR2W1Q9Y3N9 320 aa13.7□□□□□ -0.22
TPM1-203ENST00000317516 SMAD5-AS1Q9Y6J3 95 aa13.7□□□□□ -0.22
TPM1-203ENST00000317516 IGKV1D-8A0A087WSZ0 117 aa13.69□□□□□ -0.22
TPM1-203ENST00000317516 SRRM4A7MD48 611 aaKnown RBP13.69□□□□□ -0.22
TPM1-203ENST00000317516 CREBL2O60519 120 aaPredicted RBP13.69□□□□□ -0.22
TPM1-203ENST00000317516 BRI3O95415 125 aa13.69□□□□□ -0.22
TPM1-203ENST00000317516 CRYZL1O95825 349 aa13.69□□□□□ -0.22
TPM1-203ENST00000317516 SNRPBP14678 240 aaKnown RBP13.69□□□□□ -0.22
TPM1-203ENST00000317516 SDC2P34741 201 aa13.69□□□□□ -0.22
TPM1-203ENST00000317516 SCAND1P57086 179 aa13.69□□□□□ -0.22
TPM1-203ENST00000317516 UBE2KP61086 200 aa13.69□□□□□ -0.22
TPM1-203ENST00000317516 ZNF645Q8N7E2 425 aa13.69□□□□□ -0.22
TPM1-203ENST00000317516 DDB2Q92466 427 aa13.69□□□□□ -0.22
TPM1-203ENST00000317516 DCUN1D5Q9BTE7 237 aa13.69□□□□□ -0.22
TPM1-203ENST00000317516 TMEM235A6NFC5 223 aa13.68□□□□□ -0.22
TPM1-203ENST00000317516 J3QRK9 145 aa13.68□□□□□ -0.22
TPM1-203ENST00000317516 ACTL6BO94805 426 aa13.68□□□□□ -0.22
TPM1-203ENST00000317516 CD36P16671 472 aa13.68□□□□□ -0.22
TPM1-203ENST00000317516 AADACP22760 399 aa13.68□□□□□ -0.22
TPM1-203ENST00000317516 C5orf30Q96GV9 206 aa13.68□□□□□ -0.22
TPM1-203ENST00000317516 OR51E2Q9H255 320 aa13.68□□□□□ -0.22
TPM1-203ENST00000317516 RHBDL2Q9NX52 303 aa13.68□□□□□ -0.22
TPM1-203ENST00000317516 MRPS7Q9Y2R9 242 aaKnown RBP13.68□□□□□ -0.22
TPM1-203ENST00000317516 U3KQK5 164 aa13.68□□□□□ -0.22
TPM1-203ENST00000317516 MSGN1A6NI15 193 aa13.67□□□□□ -0.22
TPM1-203ENST00000317516 LINC00473A8K010 186 aa13.67□□□□□ -0.22
TPM1-203ENST00000317516 HLA-DQB1P01920 261 aa13.67□□□□□ -0.22
TPM1-203ENST00000317516 NFYAP23511 347 aaPredicted RBP13.67□□□□□ -0.22
TPM1-203ENST00000317516 SSBP2P81877 361 aaPredicted RBP13.67□□□□□ -0.22
TPM1-203ENST00000317516 MXD1Q05195 221 aa13.67□□□□□ -0.22
TPM1-203ENST00000317516 PRSS8Q16651 343 aa13.67□□□□□ -0.22
TPM1-203ENST00000317516 LGALS14Q8TCE9 139 aa13.67□□□□□ -0.22
TPM1-203ENST00000317516 NUDCD2Q8WVJ2 157 aa13.67□□□□□ -0.22
TPM1-203ENST00000317516 USMG5Q96IX5 58 aa13.67□□□□□ -0.22
TPM1-203ENST00000317516 TINAGL1Q9GZM7 467 aaPredicted RBP13.67□□□□□ -0.22
TPM1-203ENST00000317516 ANXA10Q9UJ72 324 aa13.67□□□□□ -0.22
TPM1-203ENST00000317516 ETV7Q9Y603 341 aa13.67□□□□□ -0.22
TPM1-203ENST00000317516 LOC100506127A0A0U1RQW1 187 aa13.66□□□□□ -0.22
TPM1-203ENST00000317516 MPPED1O15442 326 aa13.66□□□□□ -0.22
TPM1-203ENST00000317516 FCGR3BO75015 233 aa13.66□□□□□ -0.22
TPM1-203ENST00000317516 TMEM127O75204 238 aa13.66□□□□□ -0.22
TPM1-203ENST00000317516 TUSC2O75896 110 aa13.66□□□□□ -0.22
TPM1-203ENST00000317516 SPNP16150 400 aa13.66□□□□□ -0.22
TPM1-203ENST00000317516 TNXAQ16473 311 aa13.66□□□□□ -0.22
TPM1-203ENST00000317516 TATDN3Q17R31 274 aa13.66□□□□□ -0.22
TPM1-203ENST00000317516 COA4Q9NYJ1 87 aa13.66□□□□□ -0.22
TPM1-203ENST00000317516 RBMX2Q9Y388 322 aaKnown RBP13.66□□□□□ -0.22
TPM1-203ENST00000317516 A0A0A6YYH2 397 aa13.65□□□□□ -0.22
TPM1-203ENST00000317516 A6NJ64 397 aa13.65□□□□□ -0.22
TPM1-203ENST00000317516 GP9P14770 177 aa13.65□□□□□ -0.22
TPM1-203ENST00000317516 IDNKQ5T6J7 187 aa13.65□□□□□ -0.22
TPM1-203ENST00000317516 KCTD9Q7L273 389 aa13.65□□□□□ -0.22
TPM1-203ENST00000317516 ANKRD13BQ86YJ7 626 aa13.65□□□□□ -0.22
TPM1-203ENST00000317516 ACOT12Q8WYK0 555 aa13.65□□□□□ -0.22
TPM1-203ENST00000317516 HSD17B10Q99714 261 aaKnown RBP13.65□□□□□ -0.22
TPM1-203ENST00000317516 SPIN2AQ99865 258 aa13.65□□□□□ -0.22
TPM1-203ENST00000317516 SPIN2BQ9BPZ2 258 aa13.65□□□□□ -0.22
TPM1-203ENST00000317516 DIABLOQ9NR28 239 aa13.65□□□□□ -0.22
TPM1-203ENST00000317516 PEF1Q9UBV8 284 aaKnown RBP13.65□□□□□ -0.22
TPM1-203ENST00000317516 TRAV18A0A075B6X5 111 aa13.64□□□□□ -0.23
TPM1-203ENST00000317516 ANKRD34BA5PLL1 514 aa13.64□□□□□ -0.23
TPM1-203ENST00000317516 OR9G9P0C7N8 305 aa13.64□□□□□ -0.23
TPM1-203ENST00000317516 ARPC4P59998 168 aa13.64□□□□□ -0.23
TPM1-203ENST00000317516 CDK10Q15131 360 aa13.64□□□□□ -0.23
TPM1-203ENST00000317516 NEDD8Q15843 81 aa13.64□□□□□ -0.23
TPM1-203ENST00000317516 KCTD21Q4G0X4 260 aa13.64□□□□□ -0.23
TPM1-203ENST00000317516 IDO2Q6ZQW0 420 aa13.64□□□□□ -0.23
TPM1-203ENST00000317516 MMD2Q8IY49 270 aa13.64□□□□□ -0.23
TPM1-203ENST00000317516 VSTM2AQ8TAG5 236 aa13.64□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 39.1 ms