RNA–Protein interactions for RNA: ENST00000305481.10

USP47-201, Transcript of ubiquitin specific peptidase 47, humanhuman

TSL 1 (best)

Gene USP47, Length 3,577 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP47-201ENST00000305481 PPIAL4DF5H284 164 aa5.39□□□□□ -1.55
USP47-201ENST00000305481 RAB29O14966 203 aa5.39□□□□□ -1.55
USP47-201ENST00000305481 CD3EP07766 207 aa5.39□□□□□ -1.55
USP47-201ENST00000305481 SAA2P0DJI9 122 aaPredicted RBP5.39□□□□□ -1.55
USP47-201ENST00000305481 PPIAL4FP0DN26 164 aa5.39□□□□□ -1.55
USP47-201ENST00000305481 NFYBP25208 207 aa5.39□□□□□ -1.55
USP47-201ENST00000305481 ZNF273Q14593 569 aa5.39□□□□□ -1.55
USP47-201ENST00000305481 EFNB3Q15768 340 aa5.39□□□□□ -1.55
USP47-201ENST00000305481 SPANXN5Q5MJ07 72 aa5.39□□□□□ -1.55
USP47-201ENST00000305481 PRAMEF5Q5TYX0 476 aa5.39□□□□□ -1.55
USP47-201ENST00000305481 H2BFWTQ7Z2G1 175 aa5.39□□□□□ -1.55
USP47-201ENST00000305481 STX12Q86Y82 276 aa5.39□□□□□ -1.55
USP47-201ENST00000305481 VKORC1L1Q8N0U8 176 aa5.39□□□□□ -1.55
USP47-201ENST00000305481 OR2G3Q8NGZ4 309 aa5.39□□□□□ -1.55
USP47-201ENST00000305481 ZDHHC16Q969W1 377 aa5.39□□□□□ -1.55
USP47-201ENST00000305481 PRORYQ9H606 182 aa5.39□□□□□ -1.55
USP47-201ENST00000305481 UQCC1Q9NVA1 299 aa5.39□□□□□ -1.55
USP47-201ENST00000305481 SLC25A10Q9UBX3 287 aaPredicted RBP5.39□□□□□ -1.55
USP47-201ENST00000305481 GAB2Q9UQC2 676 aa5.39□□□□□ -1.55
USP47-201ENST00000305481 PPIAL4AQ9Y536 164 aa5.39□□□□□ -1.55
USP47-201ENST00000305481 ZNF729A6NN14 1252 aaPredicted RBP5.38□□□□□ -1.55
USP47-201ENST00000305481 VSTM5A8MXK1 200 aa5.38□□□□□ -1.55
USP47-201ENST00000305481 TSPAN4O14817 238 aa5.38□□□□□ -1.55
USP47-201ENST00000305481 ATG12O94817 140 aa5.38□□□□□ -1.55
USP47-201ENST00000305481 S100A6P06703 90 aa5.38□□□□□ -1.55
USP47-201ENST00000305481 OR9G9P0C7N8 305 aa5.38□□□□□ -1.55
USP47-201ENST00000305481 RNF224P0DH78 156 aa5.38□□□□□ -1.55
USP47-201ENST00000305481 NDUFB7P17568 137 aa5.38□□□□□ -1.55
USP47-201ENST00000305481 LOXP28300 417 aaPredicted RBP5.38□□□□□ -1.55
USP47-201ENST00000305481 SNCAP37840 140 aa5.38□□□□□ -1.55
USP47-201ENST00000305481 CAMLGP49069 296 aa5.38□□□□□ -1.55
USP47-201ENST00000305481 RELQ04864 619 aaPredicted RBP5.38□□□□□ -1.55
USP47-201ENST00000305481 ZNF616Q08AN1 781 aa5.38□□□□□ -1.55
USP47-201ENST00000305481 BTN1A1Q13410 526 aa5.38□□□□□ -1.55
USP47-201ENST00000305481 GUCA2BQ16661 112 aa5.38□□□□□ -1.55
USP47-201ENST00000305481 SP5Q6BEB4 398 aaPredicted RBP5.38□□□□□ -1.55
USP47-201ENST00000305481 TMEM14EPQ6UXP3 125 aa5.38□□□□□ -1.55
USP47-201ENST00000305481 ZNF525Q8N782 197 aa5.38□□□□□ -1.55
USP47-201ENST00000305481 CD300LFQ8TDQ1 290 aa5.38□□□□□ -1.55
USP47-201ENST00000305481 R3HDM4Q96D70 268 aa5.38□□□□□ -1.55
USP47-201ENST00000305481 LRRC46Q96FV0 321 aa5.38□□□□□ -1.55
USP47-201ENST00000305481 OR4C12Q96R67 309 aa5.38□□□□□ -1.55
USP47-201ENST00000305481 IDI2-AS1Q9NZ38 188 aa5.38□□□□□ -1.55
USP47-201ENST00000305481 CISD1Q9NZ45 108 aaKnown RBP5.38□□□□□ -1.55
USP47-201ENST00000305481 RNASEK-C17orf49H0YIS7 233 aa5.38□□□□□ -1.55
USP47-201ENST00000305481 ZG16O60844 167 aa5.38□□□□□ -1.55
USP47-201ENST00000305481 SFTPCP11686 197 aa5.38□□□□□ -1.55
USP47-201ENST00000305481 RAB5CP51148 216 aa5.38□□□□□ -1.55
USP47-201ENST00000305481 DEFA5Q01523 94 aa5.38□□□□□ -1.55
USP47-201ENST00000305481 AARDQ4LEZ3 155 aa5.38□□□□□ -1.55
USP47-201ENST00000305481 SPINK9Q5DT21 86 aa5.38□□□□□ -1.55
USP47-201ENST00000305481 TMEM200BQ69YZ2 307 aa5.38□□□□□ -1.55
USP47-201ENST00000305481 FAM213BQ8TBF2 198 aa5.38□□□□□ -1.55
USP47-201ENST00000305481 QTRT1Q9BXR0 403 aaKnown RBP5.38□□□□□ -1.55
USP47-201ENST00000305481 MS4A5Q9H3V2 200 aa5.38□□□□□ -1.55
USP47-201ENST00000305481 DYNLRB1Q9NP97 96 aa5.38□□□□□ -1.55
USP47-201ENST00000305481 TREM1Q9NP99 234 aa5.38□□□□□ -1.55
USP47-201ENST00000305481 CTSZQ9UBR2 303 aa5.38□□□□□ -1.55
USP47-201ENST00000305481 NDRG3Q9UGV2 375 aa5.38□□□□□ -1.55
USP47-201ENST00000305481 RPUSD1Q9UJJ7 312 aaKnown RBP5.38□□□□□ -1.55
USP47-201ENST00000305481 LINC00312Q9Y6C7 94 aa5.38□□□□□ -1.55
USP47-201ENST00000305481 DOCK11Q5JSL3 2073 aa5.38□□□□□ -1.55
USP47-201ENST00000305481 YLPM1P49750 1951 aaKnown RBP5.38□□□□□ -1.55
USP47-201ENST00000305481 ABCA4P78363 2273 aa5.37□□□□□ -1.55
USP47-201ENST00000305481 TRAV3A0A0B4J244 114 aa5.37□□□□□ -1.55
USP47-201ENST00000305481 NKX6-3A6NJ46 265 aa5.37□□□□□ -1.55
USP47-201ENST00000305481 PMS2P5A8MQ11 134 aa5.37□□□□□ -1.55
USP47-201ENST00000305481 B9A039 149 aa5.37□□□□□ -1.55
USP47-201ENST00000305481 DLL1O00548 723 aa5.37□□□□□ -1.55
USP47-201ENST00000305481 HPRT1P00492 218 aa5.37□□□□□ -1.55
USP47-201ENST00000305481 PRH1P02810 166 aa5.37□□□□□ -1.55
USP47-201ENST00000305481 CCL3L1P16619 93 aa5.37□□□□□ -1.55
USP47-201ENST00000305481 GNG10P50151 68 aa5.37□□□□□ -1.55
USP47-201ENST00000305481 RAB7AP51149 207 aa5.37□□□□□ -1.55
USP47-201ENST00000305481 RPL31P62899 125 aaKnown RBP5.37□□□□□ -1.55
USP47-201ENST00000305481 C1orf87Q8N0U7 546 aa5.37□□□□□ -1.55
USP47-201ENST00000305481 ZNF383Q8NA42 475 aa5.37□□□□□ -1.55
USP47-201ENST00000305481 LAMP3Q9UQV4 416 aa5.37□□□□□ -1.55
USP47-201ENST00000305481 STRAPQ9Y3F4 350 aaKnown RBP5.37□□□□□ -1.55
USP47-201ENST00000305481 HCFC1P51610 2035 aa5.37□□□□□ -1.55
USP47-201ENST00000305481 hADV38S2A0JD32 116 aa5.37□□□□□ -1.55
USP47-201ENST00000305481 RBFOX2O43251 390 aaKnown RBP eCLIP5.37□□□□□ -1.55
USP47-201ENST00000305481 PPIHO43447 177 aaKnown RBP5.37□□□□□ -1.55
USP47-201ENST00000305481 DFFBO76075 338 aa5.37□□□□□ -1.55
USP47-201ENST00000305481 TSPAN15O95858 294 aa5.37□□□□□ -1.55
USP47-201ENST00000305481 F12P00748 615 aaPredicted RBP5.37□□□□□ -1.55
USP47-201ENST00000305481 OR2B8PP59922 312 aa5.37□□□□□ -1.55
USP47-201ENST00000305481 CCL20P78556 96 aa5.37□□□□□ -1.55
USP47-201ENST00000305481 TFF3Q07654 80 aa5.37□□□□□ -1.55
USP47-201ENST00000305481 UNQ6494/PRO21346Q6UXR6 183 aa5.37□□□□□ -1.55
USP47-201ENST00000305481 SLC25A48Q6ZT89 311 aaKnown RBP5.37□□□□□ -1.55
USP47-201ENST00000305481 SSX9Q7RTT3 188 aa5.37□□□□□ -1.55
USP47-201ENST00000305481 THNSL2Q86YJ6 484 aa5.37□□□□□ -1.55
USP47-201ENST00000305481 PUSL1Q8N0Z8 303 aaKnown RBP5.37□□□□□ -1.55
USP47-201ENST00000305481 LYG1Q8N1E2 194 aa5.37□□□□□ -1.55
USP47-201ENST00000305481 ZCCHC14Q8WYQ9 949 aaKnown RBP5.37□□□□□ -1.55
USP47-201ENST00000305481 GNPNAT1Q96EK6 184 aaPredicted RBP5.37□□□□□ -1.55
USP47-201ENST00000305481 RSG1Q9BU20 258 aa5.37□□□□□ -1.55
USP47-201ENST00000305481 CARHSP1Q9Y2V2 147 aaKnown RBP5.37□□□□□ -1.55
USP47-201ENST00000305481 PKD1L2Q7Z442 2459 aa5.37□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 43 ms