RNA–Protein interactions for RNA: ENST00000304494.9

CDKN2A-201, Transcript of cyclin dependent kinase inhibitor 2A, humanhuman

TSL 1 (best) BASIC

Gene CDKN2A, Length 1,218 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKN2A-201ENST00000304494 NFYAP23511 347 aaPredicted RBP20.56■□□□□ 0.88
CDKN2A-201ENST00000304494 FXYD3Q14802 87 aa20.56■□□□□ 0.88
CDKN2A-201ENST00000304494 DDB2Q92466 427 aa20.56■□□□□ 0.88
CDKN2A-201ENST00000304494 CNIH1O95406 144 aa20.55■□□□□ 0.88
CDKN2A-201ENST00000304494 OR8U8P0C7N1 319 aa20.55■□□□□ 0.88
CDKN2A-201ENST00000304494 LFNGQ8NES3 379 aa20.55■□□□□ 0.88
CDKN2A-201ENST00000304494 OR1N2Q8NGR9 330 aa20.55■□□□□ 0.88
CDKN2A-201ENST00000304494 J3QRK9 145 aa20.54■□□□□ 0.88
CDKN2A-201ENST00000304494 ARPC4P59998 168 aa20.54■□□□□ 0.88
CDKN2A-201ENST00000304494 ZNF616Q08AN1 781 aa20.54■□□□□ 0.88
CDKN2A-201ENST00000304494 C9orf66Q5T8R8 295 aa20.54■□□□□ 0.88
CDKN2A-201ENST00000304494 GRPEL2Q8TAA5 225 aa20.54■□□□□ 0.88
CDKN2A-201ENST00000304494 OR5B12Q96R08 314 aa20.54■□□□□ 0.88
CDKN2A-201ENST00000304494 LINC00473A8K010 186 aa20.53■□□□□ 0.88
CDKN2A-201ENST00000304494 CRYGBP07316 175 aa20.53■□□□□ 0.88
CDKN2A-201ENST00000304494 TGFBR1P36897 503 aa20.53■□□□□ 0.88
CDKN2A-201ENST00000304494 RPS19P39019 145 aaKnown RBP20.53■□□□□ 0.88
CDKN2A-201ENST00000304494 GNB1P62873 340 aa20.53■□□□□ 0.88
CDKN2A-201ENST00000304494 VMA21Q3ZAQ7 101 aa20.53■□□□□ 0.88
CDKN2A-201ENST00000304494 BEST4Q8NFU0 473 aa20.53■□□□□ 0.88
CDKN2A-201ENST00000304494 OSR1Q8TAX0 266 aaPredicted RBP20.53■□□□□ 0.88
CDKN2A-201ENST00000304494 SLA2Q9H6Q3 261 aa20.53■□□□□ 0.88
CDKN2A-201ENST00000304494 K7EIL1 84 aa20.52■□□□□ 0.88
CDKN2A-201ENST00000304494 ARPC1BO15143 372 aaKnown RBP20.52■□□□□ 0.88
CDKN2A-201ENST00000304494 CRYZL1O95825 349 aa20.52■□□□□ 0.88
CDKN2A-201ENST00000304494 LSM3P62310 102 aaKnown RBP20.52■□□□□ 0.88
CDKN2A-201ENST00000304494 HOGA1Q86XE5 327 aa20.52■□□□□ 0.88
CDKN2A-201ENST00000304494 S100A16Q96FQ6 103 aaKnown RBP20.52■□□□□ 0.88
CDKN2A-201ENST00000304494 AUNIPQ9H7T9 357 aa20.52■□□□□ 0.88
CDKN2A-201ENST00000304494 PRELID3BQ9Y3B1 194 aa20.52■□□□□ 0.88
CDKN2A-201ENST00000304494 CBX5P45973 191 aa20.51■□□□□ 0.87
CDKN2A-201ENST00000304494 UBE2KP61086 200 aa20.51■□□□□ 0.87
CDKN2A-201ENST00000304494 PJVKQ0ZLH3 352 aa20.51■□□□□ 0.87
CDKN2A-201ENST00000304494 KCTD9Q7L273 389 aa20.51■□□□□ 0.87
CDKN2A-201ENST00000304494 TEX45Q8NA69 505 aa20.51■□□□□ 0.87
CDKN2A-201ENST00000304494 CASTOR1Q8WTX7 329 aa20.51■□□□□ 0.87
CDKN2A-201ENST00000304494 TMEM68Q96MH6 324 aa20.51■□□□□ 0.87
CDKN2A-201ENST00000304494 MRPS7Q9Y2R9 242 aaKnown RBP20.51■□□□□ 0.87
CDKN2A-201ENST00000304494 RBMX2Q9Y388 322 aaKnown RBP20.51■□□□□ 0.87
CDKN2A-201ENST00000304494 WI2-2373I1.2A0A1W2PRP0 233 aa20.5■□□□□ 0.87
CDKN2A-201ENST00000304494 TRIM64CA6NLI5 447 aa20.5■□□□□ 0.87
CDKN2A-201ENST00000304494 SRRM4A7MD48 611 aaKnown RBP20.5■□□□□ 0.87
CDKN2A-201ENST00000304494 SEC14L6B5MCN3 397 aa20.5■□□□□ 0.87
CDKN2A-201ENST00000304494 TUSC2O75896 110 aa20.5■□□□□ 0.87
CDKN2A-201ENST00000304494 LGALS1P09382 135 aaKnown RBP20.5■□□□□ 0.87
CDKN2A-201ENST00000304494 TPPP2P59282 170 aa20.5■□□□□ 0.87
CDKN2A-201ENST00000304494 DGCR2P98153 550 aa20.5■□□□□ 0.87
CDKN2A-201ENST00000304494 UBE2NLQ5JXB2 153 aa20.5■□□□□ 0.87
CDKN2A-201ENST00000304494 GVQW1Q8N7I0 195 aa20.5■□□□□ 0.87
CDKN2A-201ENST00000304494 HSD17B10Q99714 261 aaKnown RBP20.5■□□□□ 0.87
CDKN2A-201ENST00000304494 IGKV1D-13A0A0B4J2D9 117 aa20.49■□□□□ 0.87
CDKN2A-201ENST00000304494 H3BUA1 57 aa20.49■□□□□ 0.87
CDKN2A-201ENST00000304494 XRCC3O43542 346 aa20.49■□□□□ 0.87
CDKN2A-201ENST00000304494 RAMP3O60896 148 aa20.49■□□□□ 0.87
CDKN2A-201ENST00000304494 IGKV1-13P0DP09 117 aa20.49■□□□□ 0.87
CDKN2A-201ENST00000304494 SSBP2P81877 361 aaPredicted RBP20.49■□□□□ 0.87
CDKN2A-201ENST00000304494 ASPHD1Q5U4P2 390 aa20.49■□□□□ 0.87
CDKN2A-201ENST00000304494 OVCH2Q7RTZ1 564 aa20.49■□□□□ 0.87
CDKN2A-201ENST00000304494 MS4A10Q96PG2 267 aa20.49■□□□□ 0.87
CDKN2A-201ENST00000304494 DCUN1D5Q9BTE7 237 aa20.49■□□□□ 0.87
CDKN2A-201ENST00000304494 CREBL2O60519 120 aaPredicted RBP20.48■□□□□ 0.87
CDKN2A-201ENST00000304494 FCGR3BO75015 233 aa20.48■□□□□ 0.87
CDKN2A-201ENST00000304494 IGLV2-14P01704 120 aa20.48■□□□□ 0.87
CDKN2A-201ENST00000304494 DEFB121Q5J5C9 76 aa20.48■□□□□ 0.87
CDKN2A-201ENST00000304494 POC5Q8NA72 575 aa20.48■□□□□ 0.87
CDKN2A-201ENST00000304494 ZNF355PQ9NSJ1 428 aa20.48■□□□□ 0.87
CDKN2A-201ENST00000304494 LINC01619G3V211 115 aa20.47■□□□□ 0.87
CDKN2A-201ENST00000304494 TRGV3P03979 118 aa20.47■□□□□ 0.87
CDKN2A-201ENST00000304494 DCTN2Q13561 401 aaKnown RBP20.47■□□□□ 0.87
CDKN2A-201ENST00000304494 PRSS8Q16651 343 aa20.47■□□□□ 0.87
CDKN2A-201ENST00000304494 SAMD12Q8N8I0 201 aa20.47■□□□□ 0.87
CDKN2A-201ENST00000304494 SLC25A46Q96AG3 418 aa20.47■□□□□ 0.87
CDKN2A-201ENST00000304494 KCTD12Q96CX2 325 aaKnown RBP20.47■□□□□ 0.87
CDKN2A-201ENST00000304494 FUNDC2Q9BWH2 189 aa20.47■□□□□ 0.87
CDKN2A-201ENST00000304494 ALX4Q9H161 411 aaPredicted RBP20.47■□□□□ 0.87
CDKN2A-201ENST00000304494 FCGR2CP31995 323 aa20.46■□□□□ 0.87
CDKN2A-201ENST00000304494 INSL3P51460 131 aa20.46■□□□□ 0.87
CDKN2A-201ENST00000304494 MSMO1Q15800 293 aa20.46■□□□□ 0.87
CDKN2A-201ENST00000304494 TMEM69Q5SWH9 247 aa20.46■□□□□ 0.87
CDKN2A-201ENST00000304494 TCTEX1D2Q8WW35 142 aa20.46■□□□□ 0.87
CDKN2A-201ENST00000304494 RHOVQ96L33 236 aa20.46■□□□□ 0.87
CDKN2A-201ENST00000304494 PHB2Q99623 299 aa20.46■□□□□ 0.87
CDKN2A-201ENST00000304494 PTHLHP12272 177 aa20.45■□□□□ 0.86
CDKN2A-201ENST00000304494 RPL30P62888 115 aaKnown RBP20.45■□□□□ 0.86
CDKN2A-201ENST00000304494 CDK10Q15131 360 aa20.45■□□□□ 0.86
CDKN2A-201ENST00000304494 TNXAQ16473 311 aa20.45■□□□□ 0.86
CDKN2A-201ENST00000304494 OR2B11Q5JQS5 317 aa20.45■□□□□ 0.86
CDKN2A-201ENST00000304494 ZNF66Q6ZN08 573 aa20.45■□□□□ 0.86
CDKN2A-201ENST00000304494 IDO2Q6ZQW0 420 aa20.45■□□□□ 0.86
CDKN2A-201ENST00000304494 OR5T1Q8NG75 326 aa20.45■□□□□ 0.86
CDKN2A-201ENST00000304494 OR5AP2Q8NGF4 316 aa20.45■□□□□ 0.86
CDKN2A-201ENST00000304494 OR13F1Q8NGS4 319 aa20.45■□□□□ 0.86
CDKN2A-201ENST00000304494 OR4S2Q8NH73 311 aa20.45■□□□□ 0.86
CDKN2A-201ENST00000304494 IFT46Q9NQC8 304 aa20.45■□□□□ 0.86
CDKN2A-201ENST00000304494 A0A0G2JLM5 398 aa20.44■□□□□ 0.86
CDKN2A-201ENST00000304494 OVOL1O14753 267 aa20.44■□□□□ 0.86
CDKN2A-201ENST00000304494 ACTL6BO94805 426 aa20.44■□□□□ 0.86
CDKN2A-201ENST00000304494 BRI3O95415 125 aa20.44■□□□□ 0.86
CDKN2A-201ENST00000304494 PPYP01298 95 aa20.44■□□□□ 0.86
CDKN2A-201ENST00000304494 IGHV3-11P01762 117 aa20.44■□□□□ 0.86
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms