RNA–Protein interactions for RNA: ENST00000299185.12

DEPDC4-201, Transcript of DEP domain containing 4, humanhuman

TSL 1 (best)

Gene DEPDC4, Length 768 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DEPDC4-201ENST00000299185 GPR31O00270 319 aa5.19□□□□□ -1.58
DEPDC4-201ENST00000299185 HOXA3O43365 443 aaPredicted RBP5.19□□□□□ -1.58
DEPDC4-201ENST00000299185 FCGR3BO75015 233 aa5.19□□□□□ -1.58
DEPDC4-201ENST00000299185 S1PR2O95136 353 aa5.19□□□□□ -1.58
DEPDC4-201ENST00000299185 VENTXO95231 258 aa5.19□□□□□ -1.58
DEPDC4-201ENST00000299185 CTXN2P0C2S0 81 aa5.19□□□□□ -1.58
DEPDC4-201ENST00000299185 MYOD1P15172 320 aa5.19□□□□□ -1.58
DEPDC4-201ENST00000299185 TBPP20226 339 aa5.19□□□□□ -1.58
DEPDC4-201ENST00000299185 HNF1AP20823 631 aa5.19□□□□□ -1.58
DEPDC4-201ENST00000299185 IL3RAP26951 378 aa5.19□□□□□ -1.58
DEPDC4-201ENST00000299185 GNRHRP30968 328 aa5.19□□□□□ -1.58
DEPDC4-201ENST00000299185 DUTP33316 252 aaKnown RBP5.19□□□□□ -1.58
DEPDC4-201ENST00000299185 RAB7AP51149 207 aa5.19□□□□□ -1.58
DEPDC4-201ENST00000299185 ZNF137PP52743 207 aa5.19□□□□□ -1.58
DEPDC4-201ENST00000299185 PRRX1P54821 245 aa5.19□□□□□ -1.58
DEPDC4-201ENST00000299185 PIGPP57054 158 aa5.19□□□□□ -1.58
DEPDC4-201ENST00000299185 AP3S2P59780 193 aa5.19□□□□□ -1.58
DEPDC4-201ENST00000299185 PPP1R1AQ13522 171 aa5.19□□□□□ -1.58
DEPDC4-201ENST00000299185 HES1Q14469 280 aa5.19□□□□□ -1.58
DEPDC4-201ENST00000299185 LRRC75BQ2VPJ9 315 aa5.19□□□□□ -1.58
DEPDC4-201ENST00000299185 MIDNQ504T8 468 aa5.19□□□□□ -1.58
DEPDC4-201ENST00000299185 MINOS1Q5TGZ0 78 aa5.19□□□□□ -1.58
DEPDC4-201ENST00000299185 LIN54Q6MZP7 749 aa5.19□□□□□ -1.58
DEPDC4-201ENST00000299185 KCTD9Q7L273 389 aa5.19□□□□□ -1.58
DEPDC4-201ENST00000299185 TBC1D26Q86UD7 250 aa5.19□□□□□ -1.58
DEPDC4-201ENST00000299185 VKORC1L1Q8N0U8 176 aa5.19□□□□□ -1.58
DEPDC4-201ENST00000299185 LHFPL5Q8TAF8 219 aa5.19□□□□□ -1.58
DEPDC4-201ENST00000299185 ENKURQ8TC29 256 aa5.19□□□□□ -1.58
DEPDC4-201ENST00000299185 PIFOQ8TCI5 191 aa5.19□□□□□ -1.58
DEPDC4-201ENST00000299185 TP53RKQ96S44 253 aa5.19□□□□□ -1.58
DEPDC4-201ENST00000299185 SSX3Q99909 188 aa5.19□□□□□ -1.58
DEPDC4-201ENST00000299185 PRRT1Q99946 306 aa5.19□□□□□ -1.58
DEPDC4-201ENST00000299185 RTBDNQ9BSG5 229 aaPredicted RBP5.19□□□□□ -1.58
DEPDC4-201ENST00000299185 SLC2A9Q9NRM0 540 aa5.19□□□□□ -1.58
DEPDC4-201ENST00000299185 SLC35D1Q9NTN3 355 aa5.19□□□□□ -1.58
DEPDC4-201ENST00000299185 NUDT15Q9NV35 164 aa5.19□□□□□ -1.58
DEPDC4-201ENST00000299185 ZNF107Q9UII5 783 aaPredicted RBP5.19□□□□□ -1.58
DEPDC4-201ENST00000299185 FAM96BQ9Y3D0 163 aa5.19□□□□□ -1.58
DEPDC4-201ENST00000299185 TBL2Q9Y4P3 447 aaKnown RBP5.19□□□□□ -1.58
DEPDC4-201ENST00000299185 MINOS1-NBL1R4GNA1 71 aa5.19□□□□□ -1.58
DEPDC4-201ENST00000299185 A0A0G2JRQ6 117 aa5.18□□□□□ -1.58
DEPDC4-201ENST00000299185 H7C2Y5 167 aa5.18□□□□□ -1.58
DEPDC4-201ENST00000299185 ITGB1BP1O14713 200 aa5.18□□□□□ -1.58
DEPDC4-201ENST00000299185 CRLF1O75462 422 aa5.18□□□□□ -1.58
DEPDC4-201ENST00000299185 PGLYRP1O75594 196 aaPredicted RBP5.18□□□□□ -1.58
DEPDC4-201ENST00000299185 NDUFB6O95139 128 aa5.18□□□□□ -1.58
DEPDC4-201ENST00000299185 NXPH3O95157 252 aa5.18□□□□□ -1.58
DEPDC4-201ENST00000299185 CRYZL1O95825 349 aa5.18□□□□□ -1.58
DEPDC4-201ENST00000299185 IGKV1-39P01597 117 aa5.18□□□□□ -1.58
DEPDC4-201ENST00000299185 IGKV1-16P04430 117 aa5.18□□□□□ -1.58
DEPDC4-201ENST00000299185 IGKV1D-39P04432 117 aa5.18□□□□□ -1.58
DEPDC4-201ENST00000299185 CTSDP07339 412 aaPredicted RBP5.18□□□□□ -1.58
DEPDC4-201ENST00000299185 FBP1P09467 338 aa5.18□□□□□ -1.58
DEPDC4-201ENST00000299185 OR5AC1P0C628 307 aa5.18□□□□□ -1.58
DEPDC4-201ENST00000299185 AKR1C4P17516 323 aa5.18□□□□□ -1.58
DEPDC4-201ENST00000299185 ATF4P18848 351 aaPredicted RBP5.18□□□□□ -1.58
DEPDC4-201ENST00000299185 FAUP35544 74 aaKnown RBP5.18□□□□□ -1.58
DEPDC4-201ENST00000299185 HABP2Q14520 560 aaPredicted RBP5.18□□□□□ -1.58
DEPDC4-201ENST00000299185 ABCA11PQ4W5N1 156 aa5.18□□□□□ -1.58
DEPDC4-201ENST00000299185 LY6G6FQ5SQ64 297 aa5.18□□□□□ -1.58
DEPDC4-201ENST00000299185 C10orf55Q5SWW7 151 aa5.18□□□□□ -1.58
DEPDC4-201ENST00000299185 DHRS11Q6UWP2 260 aa5.18□□□□□ -1.58
DEPDC4-201ENST00000299185 SSX9Q7RTT3 188 aa5.18□□□□□ -1.58
DEPDC4-201ENST00000299185 SLC38A6Q8IZM9 456 aa5.18□□□□□ -1.58
DEPDC4-201ENST00000299185 ZDHHC22Q8N966 263 aa5.18□□□□□ -1.58
DEPDC4-201ENST00000299185 C8orf31Q8N9H6 132 aa5.18□□□□□ -1.58
DEPDC4-201ENST00000299185 TERB2Q8NHR7 220 aa5.18□□□□□ -1.58
DEPDC4-201ENST00000299185 CASTOR1Q8WTX7 329 aa5.18□□□□□ -1.58
DEPDC4-201ENST00000299185 DDB2Q92466 427 aa5.18□□□□□ -1.58
DEPDC4-201ENST00000299185 ANAPC16Q96DE5 110 aa5.18□□□□□ -1.58
DEPDC4-201ENST00000299185 CHIAQ9BZP6 476 aa5.18□□□□□ -1.58
DEPDC4-201ENST00000299185 DPAGT1Q9H3H5 408 aa5.18□□□□□ -1.58
DEPDC4-201ENST00000299185 NAA60Q9H7X0 242 aa5.18□□□□□ -1.58
DEPDC4-201ENST00000299185 SLC2A8Q9NY64 477 aa5.18□□□□□ -1.58
DEPDC4-201ENST00000299185 SCP2D1Q9UJQ7 156 aa5.18□□□□□ -1.58
DEPDC4-201ENST00000299185 GPR132Q9UNW8 380 aa5.18□□□□□ -1.58
DEPDC4-201ENST00000299185 C14orf166Q9Y224 244 aaKnown RBP5.18□□□□□ -1.58
DEPDC4-201ENST00000299185 SIGLEC9Q9Y336 463 aa5.18□□□□□ -1.58
DEPDC4-201ENST00000299185 TRAV3A0A0B4J244 114 aa5.17□□□□□ -1.58
DEPDC4-201ENST00000299185 FAM240BA0A1B0GVZ2 78 aa5.17□□□□□ -1.58
DEPDC4-201ENST00000299185 A6NDX4 124 aa5.17□□□□□ -1.58
DEPDC4-201ENST00000299185 NAP1L6A6NFF2 107 aa5.17□□□□□ -1.58
DEPDC4-201ENST00000299185 SRRM4A7MD48 611 aaKnown RBP5.17□□□□□ -1.58
DEPDC4-201ENST00000299185 CCSO14618 274 aa5.17□□□□□ -1.58
DEPDC4-201ENST00000299185 RAB29O14966 203 aa5.17□□□□□ -1.58
DEPDC4-201ENST00000299185 SHOXO15266 292 aa5.17□□□□□ -1.58
DEPDC4-201ENST00000299185 IGLV2-23P01705 113 aa5.17□□□□□ -1.58
DEPDC4-201ENST00000299185 GAPDHP04406 335 aaKnown RBP5.17□□□□□ -1.58
DEPDC4-201ENST00000299185 TCRBP04435 133 aa5.17□□□□□ -1.58
DEPDC4-201ENST00000299185 TMEM11P17152 192 aa5.17□□□□□ -1.58
DEPDC4-201ENST00000299185 SLC6A1P30531 599 aa5.17□□□□□ -1.58
DEPDC4-201ENST00000299185 LPAR6P43657 344 aa5.17□□□□□ -1.58
DEPDC4-201ENST00000299185 THBS3P49746 956 aa5.17□□□□□ -1.58
DEPDC4-201ENST00000299185 F2RL1P55085 397 aa5.17□□□□□ -1.58
DEPDC4-201ENST00000299185 DEFA1P59665 94 aa5.17□□□□□ -1.58
DEPDC4-201ENST00000299185 DEFA3P59666 94 aa5.17□□□□□ -1.58
DEPDC4-201ENST00000299185 OR2B8PP59922 312 aa5.17□□□□□ -1.58
DEPDC4-201ENST00000299185 SUPT4H1P63272 117 aaKnown RBP5.17□□□□□ -1.58
DEPDC4-201ENST00000299185 NDPQ00604 133 aa5.17□□□□□ -1.58
DEPDC4-201ENST00000299185 RBMS2Q15434 407 aaKnown RBP5.17□□□□□ -1.58
Retrieved 100 of 20,778 RNA–protein pairs in 36.2 ms