RNA–Protein interactions for RNA: ENST00000291300.8

HIF3A-203, Transcript of hypoxia inducible factor 3 subunit alpha, humanhuman

TSL 5

Gene HIF3A, Length 2,101 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIF3A-203ENST00000291300 HEPN1Q6WQI6 88 aa13.69□□□□□ -0.22
HIF3A-203ENST00000291300 TCTEX1D1Q8N7M0 179 aa13.69□□□□□ -0.22
HIF3A-203ENST00000291300 SMIM8Q96KF7 97 aa13.69□□□□□ -0.22
HIF3A-203ENST00000291300 HRH4Q9H3N8 390 aa13.69□□□□□ -0.22
HIF3A-203ENST00000291300 GAB2Q9UQC2 676 aa13.69□□□□□ -0.22
HIF3A-203ENST00000291300 PPOXP50336 477 aa13.68□□□□□ -0.22
HIF3A-203ENST00000291300 RPL23AP62750 156 aaKnown RBP13.68□□□□□ -0.22
HIF3A-203ENST00000291300 DIAPH2-AS1Q14236 149 aa13.68□□□□□ -0.22
HIF3A-203ENST00000291300 ZNF841Q6ZN19 808 aa13.68□□□□□ -0.22
HIF3A-203ENST00000291300 C11orf42Q8N5U0 333 aa13.68□□□□□ -0.22
HIF3A-203ENST00000291300 S1PR3Q99500 378 aa13.68□□□□□ -0.22
HIF3A-203ENST00000291300 GAL3ST2Q9H3Q3 398 aa13.68□□□□□ -0.22
HIF3A-203ENST00000291300 RAB9BQ9NP90 201 aa13.68□□□□□ -0.22
HIF3A-203ENST00000291300 CTNNBIP1Q9NSA3 81 aaPredicted RBP13.68□□□□□ -0.22
HIF3A-203ENST00000291300 CRYZL1O95825 349 aa13.67□□□□□ -0.22
HIF3A-203ENST00000291300 HPRT1P00492 218 aa13.67□□□□□ -0.22
HIF3A-203ENST00000291300 DANCRP0C864 163 aa13.67□□□□□ -0.22
HIF3A-203ENST00000291300 ATP6V0CP27449 155 aa13.67□□□□□ -0.22
HIF3A-203ENST00000291300 PLA2G5P39877 138 aa13.67□□□□□ -0.22
HIF3A-203ENST00000291300 TUSC1Q2TAM9 212 aa13.67□□□□□ -0.22
HIF3A-203ENST00000291300 EIF4E3Q8N5X7 224 aaKnown RBP13.67□□□□□ -0.22
HIF3A-203ENST00000291300 OR4C12Q96R67 309 aa13.67□□□□□ -0.22
HIF3A-203ENST00000291300 CBLN4Q9NTU7 201 aa13.67□□□□□ -0.22
HIF3A-203ENST00000291300 ARHGAP32A7KAX9 2087 aa13.67□□□□□ -0.22
HIF3A-203ENST00000291300 CT45A6P0DMU7 189 aa13.67□□□□□ -0.22
HIF3A-203ENST00000291300 CT45A5P0DMU8 189 aa13.67□□□□□ -0.22
HIF3A-203ENST00000291300 CT45A7P0DMV0 189 aa13.67□□□□□ -0.22
HIF3A-203ENST00000291300 SULT1A1P50225 295 aa13.67□□□□□ -0.22
HIF3A-203ENST00000291300 CD300LFQ8TDQ1 290 aa13.67□□□□□ -0.22
HIF3A-203ENST00000291300 FAM216AQ8WUB2 273 aa13.67□□□□□ -0.22
HIF3A-203ENST00000291300 MARVELD3Q96A59 401 aa13.67□□□□□ -0.22
HIF3A-203ENST00000291300 ZFYVE26Q68DK2 2539 aa13.67□□□□□ -0.22
HIF3A-203ENST00000291300 F12P00748 615 aaPredicted RBP13.66□□□□□ -0.22
HIF3A-203ENST00000291300 SEC11BP0C7V7 166 aa13.66□□□□□ -0.22
HIF3A-203ENST00000291300 BAXQ07812 192 aa13.66□□□□□ -0.22
HIF3A-203ENST00000291300 TMEM155Q4W5P6 130 aa13.66□□□□□ -0.22
HIF3A-203ENST00000291300 Q6ZRG5 221 aa13.66□□□□□ -0.22
HIF3A-203ENST00000291300 MARC2Q969Z3 335 aa13.66□□□□□ -0.22
HIF3A-203ENST00000291300 LAMP3Q9UQV4 416 aa13.66□□□□□ -0.22
HIF3A-203ENST00000291300 AKAP6Q13023 2319 aa13.66□□□□□ -0.22
HIF3A-203ENST00000291300 FAM90A26D6RGX4 464 aa13.66□□□□□ -0.22
HIF3A-203ENST00000291300 RBMXL2O75526 392 aaKnown RBP13.66□□□□□ -0.22
HIF3A-203ENST00000291300 IGKV1-16P04430 117 aa13.66□□□□□ -0.22
HIF3A-203ENST00000291300 REG1BP48304 166 aa13.66□□□□□ -0.22
HIF3A-203ENST00000291300 EIF5AL1Q6IS14 154 aaKnown RBP13.66□□□□□ -0.22
HIF3A-203ENST00000291300 TMEM182Q6ZP80 229 aaPredicted RBP13.66□□□□□ -0.22
HIF3A-203ENST00000291300 ZNF436-AS1Q8NC38 126 aaPredicted RBP13.66□□□□□ -0.22
HIF3A-203ENST00000291300 BPIFCQ8NFQ6 507 aa13.66□□□□□ -0.22
HIF3A-203ENST00000291300 LRRC20Q8TCA0 184 aa13.66□□□□□ -0.22
HIF3A-203ENST00000291300 RBFOX2O43251 390 aaKnown RBP eCLIP13.65□□□□□ -0.22
HIF3A-203ENST00000291300 NDUFS7O75251 213 aa13.65□□□□□ -0.22
HIF3A-203ENST00000291300 DAOP14920 347 aa13.65□□□□□ -0.22
HIF3A-203ENST00000291300 MYOD1P15172 320 aa13.65□□□□□ -0.22
HIF3A-203ENST00000291300 BTNL8Q6UX41 500 aa13.65□□□□□ -0.22
HIF3A-203ENST00000291300 STX12Q86Y82 276 aa13.65□□□□□ -0.22
HIF3A-203ENST00000291300 ATP5SQ99766 215 aa13.65□□□□□ -0.22
HIF3A-203ENST00000291300 TMEM231Q9H6L2 316 aa13.65□□□□□ -0.22
HIF3A-203ENST00000291300 TMEM140Q9NV12 185 aa13.65□□□□□ -0.22
HIF3A-203ENST00000291300 CACFD1Q9UGQ2 172 aa13.65□□□□□ -0.22
HIF3A-203ENST00000291300 PRELID3BQ9Y3B1 194 aa13.65□□□□□ -0.22
HIF3A-203ENST00000291300 SPTAN1Q13813 2472 aaKnown RBP13.65□□□□□ -0.22
HIF3A-203ENST00000291300 AGPAT2O15120 278 aa13.64□□□□□ -0.23
HIF3A-203ENST00000291300 ZP3P21754 424 aa13.64□□□□□ -0.23
HIF3A-203ENST00000291300 CDKN1AP38936 164 aa13.64□□□□□ -0.23
HIF3A-203ENST00000291300 ZNF266Q14584 549 aa13.64□□□□□ -0.23
HIF3A-203ENST00000291300 SAT2Q96F10 170 aaPredicted RBP13.64□□□□□ -0.23
HIF3A-203ENST00000291300 MRPL20Q9BYC9 149 aaKnown RBP13.64□□□□□ -0.23
HIF3A-203ENST00000291300 ASH1LQ9NR48 2969 aaKnown RBP13.64□□□□□ -0.23
HIF3A-203ENST00000291300 FLNCQ14315 2725 aa13.64□□□□□ -0.23
HIF3A-203ENST00000291300 NDUFA2O43678 99 aa13.64□□□□□ -0.23
HIF3A-203ENST00000291300 ATG12O94817 140 aa13.64□□□□□ -0.23
HIF3A-203ENST00000291300 THBS3P49746 956 aa13.64□□□□□ -0.23
HIF3A-203ENST00000291300 ARHGDIBP52566 201 aa13.64□□□□□ -0.23
HIF3A-203ENST00000291300 RELBQ01201 579 aa13.64□□□□□ -0.23
HIF3A-203ENST00000291300 TMEM14EPQ6UXP3 125 aa13.64□□□□□ -0.23
HIF3A-203ENST00000291300 ZNF525Q8N782 197 aa13.64□□□□□ -0.23
HIF3A-203ENST00000291300 DTD1Q8TEA8 209 aa13.64□□□□□ -0.23
HIF3A-203ENST00000291300 MS4A7Q9GZW8 240 aaPredicted RBP13.64□□□□□ -0.23
HIF3A-203ENST00000291300 RAB1BQ9H0U4 201 aa13.64□□□□□ -0.23
HIF3A-203ENST00000291300 SRRM4A7MD48 611 aaKnown RBP13.63□□□□□ -0.23
HIF3A-203ENST00000291300 PRB1P04280 392 aa13.63□□□□□ -0.23
HIF3A-203ENST00000291300 NQO2P16083 231 aa13.63□□□□□ -0.23
HIF3A-203ENST00000291300 TAS2R30P59541 319 aa13.63□□□□□ -0.23
HIF3A-203ENST00000291300 OR8G2PQ6IF36 304 aa13.63□□□□□ -0.23
HIF3A-203ENST00000291300 ZNF833PQ6ZTB9 187 aa13.63□□□□□ -0.23
HIF3A-203ENST00000291300 OR10A7Q8NGE5 316 aa13.63□□□□□ -0.23
HIF3A-203ENST00000291300 OR2G3Q8NGZ4 309 aa13.63□□□□□ -0.23
HIF3A-203ENST00000291300 OR4S2Q8NH73 311 aa13.63□□□□□ -0.23
HIF3A-203ENST00000291300 FAM96BQ9Y3D0 163 aa13.63□□□□□ -0.23
HIF3A-203ENST00000291300 PMS2P5A8MQ11 134 aa13.63□□□□□ -0.23
HIF3A-203ENST00000291300 SHOXO15266 292 aa13.63□□□□□ -0.23
HIF3A-203ENST00000291300 RNF224P0DH78 156 aa13.63□□□□□ -0.23
HIF3A-203ENST00000291300 IGHV1-8P0DP01 117 aa13.63□□□□□ -0.23
HIF3A-203ENST00000291300 TMEM30BQ3MIR4 351 aa13.63□□□□□ -0.23
HIF3A-203ENST00000291300 NARFLQ9H6Q4 476 aa13.63□□□□□ -0.23
HIF3A-203ENST00000291300 PARP11Q9NR21 331 aa13.63□□□□□ -0.23
HIF3A-203ENST00000291300 MMP26Q9NRE1 261 aa13.63□□□□□ -0.23
HIF3A-203ENST00000291300 SESN1Q9Y6P5 492 aa13.63□□□□□ -0.23
HIF3A-203ENST00000291300 TNCP24821 2201 aa13.63□□□□□ -0.23
HIF3A-203ENST00000291300 CEBPZOSA8MTT3 80 aa13.62□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms