RNA–Protein interactions for RNA: ENST00000288398.10

TPM1-202, Transcript of tropomyosin 1, humanhuman

TSL 1 (best) BASIC

Gene TPM1, Length 1,295 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-202ENST00000288398 LCN12Q6JVE5 192 aa10.77□□□□□ -0.69
TPM1-202ENST00000288398 PRSS48Q7RTY5 328 aa10.77□□□□□ -0.69
TPM1-202ENST00000288398 OR10R2Q8NGX6 335 aa10.77□□□□□ -0.69
TPM1-202ENST00000288398 ACOT12Q8WYK0 555 aa10.77□□□□□ -0.69
TPM1-202ENST00000288398 CABLES2Q9BTV7 478 aa10.77□□□□□ -0.69
TPM1-202ENST00000288398 TINAGL1Q9GZM7 467 aaPredicted RBP10.77□□□□□ -0.69
TPM1-202ENST00000288398 DUSP21Q9H596 190 aa10.77□□□□□ -0.69
TPM1-202ENST00000288398 PEMTQ9UBM1 199 aa10.77□□□□□ -0.69
TPM1-202ENST00000288398 TRBV6-7A0A0A0MS04 114 aa10.76□□□□□ -0.69
TPM1-202ENST00000288398 APELAP0DMC3 54 aa10.76□□□□□ -0.69
TPM1-202ENST00000288398 GNB3P16520 340 aa10.76□□□□□ -0.69
TPM1-202ENST00000288398 PJVKQ0ZLH3 352 aa10.76□□□□□ -0.69
TPM1-202ENST00000288398 TMEM177Q53S58 311 aa10.76□□□□□ -0.69
TPM1-202ENST00000288398 ZNF367Q7RTV3 350 aa10.76□□□□□ -0.69
TPM1-202ENST00000288398 MAFIPQ8WZ33 124 aa10.76□□□□□ -0.69
TPM1-202ENST00000288398 SNAPC3Q92966 411 aa10.76□□□□□ -0.69
TPM1-202ENST00000288398 CITED4Q96RK1 184 aa10.76□□□□□ -0.69
TPM1-202ENST00000288398 DCUN1D5Q9BTE7 237 aa10.76□□□□□ -0.69
TPM1-202ENST00000288398 MSGN1A6NI15 193 aa10.75□□□□□ -0.69
TPM1-202ENST00000288398 ANKRD65E5RJM6 399 aa10.75□□□□□ -0.69
TPM1-202ENST00000288398 TUSC2O75896 110 aa10.75□□□□□ -0.69
TPM1-202ENST00000288398 CRYZL1O95825 349 aa10.75□□□□□ -0.69
TPM1-202ENST00000288398 IGLV2-23P01705 113 aa10.75□□□□□ -0.69
TPM1-202ENST00000288398 IFNA6P05013 189 aa10.75□□□□□ -0.69
TPM1-202ENST00000288398 SNRPBP14678 240 aaKnown RBP10.75□□□□□ -0.69
TPM1-202ENST00000288398 HIST1H1DP16402 221 aaKnown RBP10.75□□□□□ -0.69
TPM1-202ENST00000288398 RAB6AP20340 208 aa10.75□□□□□ -0.69
TPM1-202ENST00000288398 MAP2K4P45985 399 aa10.75□□□□□ -0.69
TPM1-202ENST00000288398 UBE2KP61086 200 aa10.75□□□□□ -0.69
TPM1-202ENST00000288398 KLF5Q13887 457 aaPredicted RBP10.75□□□□□ -0.69
TPM1-202ENST00000288398 Q8N402 240 aa10.75□□□□□ -0.69
TPM1-202ENST00000288398 TEX45Q8NA69 505 aa10.75□□□□□ -0.69
TPM1-202ENST00000288398 SPATA25Q9BR10 227 aa10.75□□□□□ -0.69
TPM1-202ENST00000288398 TM2D3Q9BRN9 247 aa10.75□□□□□ -0.69
TPM1-202ENST00000288398 ZNF230Q9UIE0 474 aaPredicted RBP10.75□□□□□ -0.69
TPM1-202ENST00000288398 MRPS7Q9Y2R9 242 aaKnown RBP10.75□□□□□ -0.69
TPM1-202ENST00000288398 RYR3Q15413 4870 aa10.74□□□□□ -0.69
TPM1-202ENST00000288398 TRAV1-2A0A0B4J238 106 aa10.74□□□□□ -0.69
TPM1-202ENST00000288398 IFITM5A6NNB3 132 aa10.74□□□□□ -0.69
TPM1-202ENST00000288398 BRI3O95415 125 aa10.74□□□□□ -0.69
TPM1-202ENST00000288398 OR9G9P0C7N8 305 aa10.74□□□□□ -0.69
TPM1-202ENST00000288398 CD36P16671 472 aa10.74□□□□□ -0.69
TPM1-202ENST00000288398 RAB3BP20337 219 aa10.74□□□□□ -0.69
TPM1-202ENST00000288398 CRHBPP24387 322 aa10.74□□□□□ -0.69
TPM1-202ENST00000288398 HSPA13P48723 471 aa10.74□□□□□ -0.69
TPM1-202ENST00000288398 DEFA5Q01523 94 aa10.74□□□□□ -0.69
TPM1-202ENST00000288398 ZFAND6Q6FIF0 208 aa10.74□□□□□ -0.69
TPM1-202ENST00000288398 ZNF343Q6P1L6 599 aa10.74□□□□□ -0.69
TPM1-202ENST00000288398 OSR1Q8TAX0 266 aaPredicted RBP10.74□□□□□ -0.69
TPM1-202ENST00000288398 SRSF12Q8WXF0 261 aaKnown RBP10.74□□□□□ -0.69
TPM1-202ENST00000288398 SPIN2AQ99865 258 aa10.74□□□□□ -0.69
TPM1-202ENST00000288398 SPIN2BQ9BPZ2 258 aa10.74□□□□□ -0.69
TPM1-202ENST00000288398 ATG5Q9H1Y0 275 aa10.74□□□□□ -0.69
TPM1-202ENST00000288398 NKX1-2Q9UD57 310 aaPredicted RBP10.74□□□□□ -0.69
TPM1-202ENST00000288398 PRELID3BQ9Y3B1 194 aa10.74□□□□□ -0.69
TPM1-202ENST00000288398 DPPA5A6NC42 116 aa10.73□□□□□ -0.69
TPM1-202ENST00000288398 FAM223BA6NKX1 122 aa10.73□□□□□ -0.69
TPM1-202ENST00000288398 A8MZ25 164 aa10.73□□□□□ -0.69
TPM1-202ENST00000288398 MFNGO00587 321 aa10.73□□□□□ -0.69
TPM1-202ENST00000288398 AIREO43918 545 aa10.73□□□□□ -0.69
TPM1-202ENST00000288398 OR2A4O95047 310 aa10.73□□□□□ -0.69
TPM1-202ENST00000288398 CRYGBP07316 175 aa10.73□□□□□ -0.69
TPM1-202ENST00000288398 CTXN2P0C2S0 81 aa10.73□□□□□ -0.69
TPM1-202ENST00000288398 OR10A3P58181 314 aa10.73□□□□□ -0.69
TPM1-202ENST00000288398 ATP5G2Q06055 141 aa10.73□□□□□ -0.69
TPM1-202ENST00000288398 TBCEQ15813 527 aaPredicted RBP10.73□□□□□ -0.69
TPM1-202ENST00000288398 PRSS8Q16651 343 aa10.73□□□□□ -0.69
TPM1-202ENST00000288398 FAM209BQ5JX69 171 aa10.73□□□□□ -0.69
TPM1-202ENST00000288398 SLC25A42Q86VD7 318 aa10.73□□□□□ -0.69
TPM1-202ENST00000288398 FAM223AQ8IWN6 122 aa10.73□□□□□ -0.69
TPM1-202ENST00000288398 DYNLRB2Q8TF09 96 aa10.73□□□□□ -0.69
TPM1-202ENST00000288398 CNBD2Q96M20 576 aa10.73□□□□□ -0.69
TPM1-202ENST00000288398 KCNK7Q9Y2U2 307 aa10.73□□□□□ -0.69
TPM1-202ENST00000288398 J3QRK9 145 aa10.72□□□□□ -0.69
TPM1-202ENST00000288398 FCGR3BO75015 233 aa10.72□□□□□ -0.69
TPM1-202ENST00000288398 SLC22A5O76082 557 aa10.72□□□□□ -0.69
TPM1-202ENST00000288398 DUTP33316 252 aaKnown RBP10.72□□□□□ -0.69
TPM1-202ENST00000288398 SSBP2P81877 361 aaPredicted RBP10.72□□□□□ -0.69
TPM1-202ENST00000288398 RHOGP84095 191 aa10.72□□□□□ -0.69
TPM1-202ENST00000288398 PLA2G7Q13093 441 aa10.72□□□□□ -0.69
TPM1-202ENST00000288398 DYRK1AQ13627 763 aa10.72□□□□□ -0.69
TPM1-202ENST00000288398 EXOSC2Q13868 293 aaKnown RBP10.72□□□□□ -0.69
TPM1-202ENST00000288398 IDO2Q6ZQW0 420 aa10.72□□□□□ -0.69
TPM1-202ENST00000288398 KCTD9Q7L273 389 aa10.72□□□□□ -0.69
TPM1-202ENST00000288398 MMD2Q8IY49 270 aa10.72□□□□□ -0.69
TPM1-202ENST00000288398 H1FOOQ8IZA3 346 aaPredicted RBP10.72□□□□□ -0.69
TPM1-202ENST00000288398 Q8N1Y9 231 aa10.72□□□□□ -0.69
TPM1-202ENST00000288398 ZNF645Q8N7E2 425 aa10.72□□□□□ -0.69
TPM1-202ENST00000288398 ST6GALNAC5Q9BVH7 336 aa10.72□□□□□ -0.69
TPM1-202ENST00000288398 C19orf73Q9NVV2 129 aa10.72□□□□□ -0.69
TPM1-202ENST00000288398 SRRM4A7MD48 611 aaKnown RBP10.71□□□□□ -0.69
TPM1-202ENST00000288398 RAB27BO00194 218 aa10.71□□□□□ -0.69
TPM1-202ENST00000288398 SCGNO76038 276 aa10.71□□□□□ -0.69
TPM1-202ENST00000288398 DTYMKP23919 212 aa10.71□□□□□ -0.69
TPM1-202ENST00000288398 CDK10Q15131 360 aa10.71□□□□□ -0.69
TPM1-202ENST00000288398 ADAD2Q8NCV1 583 aaKnown RBP10.71□□□□□ -0.69
TPM1-202ENST00000288398 OR2K2Q8NGT1 345 aa10.71□□□□□ -0.69
TPM1-202ENST00000288398 NRG4Q8WWG1 115 aa10.71□□□□□ -0.69
TPM1-202ENST00000288398 NDUFB11Q9NX14 153 aa10.71□□□□□ -0.69
TPM1-202ENST00000288398 SLC2A8Q9NY64 477 aa10.71□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms