RNA–Protein interactions for RNA: ENST00000288344.14

HMGN1-201, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 2

Gene HMGN1, Length 1,303 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-201ENST00000288344 BEST4Q8NFU0 473 aa7.17□□□□□ -1.26
HMGN1-201ENST00000288344 ABHD1Q96SE0 405 aa7.17□□□□□ -1.26
HMGN1-201ENST00000288344 NXF2Q9GZY0 626 aaKnown RBP7.17□□□□□ -1.26
HMGN1-201ENST00000288344 COMMD3Q9UBI1 195 aa7.17□□□□□ -1.26
HMGN1-201ENST00000288344 LINC00527Q9UJ94 153 aa7.17□□□□□ -1.26
HMGN1-201ENST00000288344 WASHC3Q9Y3C0 194 aa7.17□□□□□ -1.26
HMGN1-201ENST00000288344 NCBP2LA6PVI3 153 aaKnown RBP7.16□□□□□ -1.26
HMGN1-201ENST00000288344 M0R1X1 148 aa7.16□□□□□ -1.26
HMGN1-201ENST00000288344 AP4M1O00189 453 aa7.16□□□□□ -1.26
HMGN1-201ENST00000288344 CTDSP2O14595 271 aa7.16□□□□□ -1.26
HMGN1-201ENST00000288344 SOX15O60248 233 aa7.16□□□□□ -1.26
HMGN1-201ENST00000288344 IL6RP08887 468 aaPredicted RBP7.16□□□□□ -1.26
HMGN1-201ENST00000288344 SOX6P35712 828 aa7.16□□□□□ -1.26
HMGN1-201ENST00000288344 LUMP51884 338 aaPredicted RBP7.16□□□□□ -1.26
HMGN1-201ENST00000288344 GNG2P59768 71 aa7.16□□□□□ -1.26
HMGN1-201ENST00000288344 CX3CL1P78423 397 aa7.16□□□□□ -1.26
HMGN1-201ENST00000288344 KPRPQ5T749 579 aaPredicted RBP7.16□□□□□ -1.26
HMGN1-201ENST00000288344 LIN54Q6MZP7 749 aa7.16□□□□□ -1.26
HMGN1-201ENST00000288344 ZNF562Q6V9R5 426 aa7.16□□□□□ -1.26
HMGN1-201ENST00000288344 ETV3LQ6ZN32 361 aa7.16□□□□□ -1.26
HMGN1-201ENST00000288344 C18orf65Q6ZTR6 163 aa7.16□□□□□ -1.26
HMGN1-201ENST00000288344 GPR141Q7Z602 305 aa7.16□□□□□ -1.26
HMGN1-201ENST00000288344 SLC35E3Q7Z769 313 aa7.16□□□□□ -1.26
HMGN1-201ENST00000288344 PDPNQ86YL7 162 aa7.16□□□□□ -1.26
HMGN1-201ENST00000288344 OR5AP2Q8NGF4 316 aa7.16□□□□□ -1.26
HMGN1-201ENST00000288344 CHPT1Q8WUD6 406 aa7.16□□□□□ -1.26
HMGN1-201ENST00000288344 SLIRPQ9GZT3 109 aaKnown RBP7.16□□□□□ -1.26
HMGN1-201ENST00000288344 OR2D2Q9H210 308 aa7.16□□□□□ -1.26
HMGN1-201ENST00000288344 OR51J1Q9H342 316 aa7.16□□□□□ -1.26
HMGN1-201ENST00000288344 FBXL7Q9UJT9 491 aa7.16□□□□□ -1.26
HMGN1-201ENST00000288344 ZNF221Q9UK13 617 aa7.16□□□□□ -1.26
HMGN1-201ENST00000288344 RBMX2Q9Y388 322 aaKnown RBP7.16□□□□□ -1.26
HMGN1-201ENST00000288344 TGP01266 2768 aa7.16□□□□□ -1.26
HMGN1-201ENST00000288344 PSMB11A5LHX3 300 aa7.15□□□□□ -1.26
HMGN1-201ENST00000288344 H3BMQ9 156 aa7.15□□□□□ -1.26
HMGN1-201ENST00000288344 ARPC1BO15143 372 aaKnown RBP7.15□□□□□ -1.26
HMGN1-201ENST00000288344 OR5H8P0DN80 308 aa7.15□□□□□ -1.26
HMGN1-201ENST00000288344 AADACP22760 399 aa7.15□□□□□ -1.26
HMGN1-201ENST00000288344 GNRHRP30968 328 aa7.15□□□□□ -1.26
HMGN1-201ENST00000288344 CBX5P45973 191 aa7.15□□□□□ -1.26
HMGN1-201ENST00000288344 LGALS7P47929 136 aa7.15□□□□□ -1.26
HMGN1-201ENST00000288344 MRPS15P82914 257 aaKnown RBP7.15□□□□□ -1.26
HMGN1-201ENST00000288344 DYRK1AQ13627 763 aa7.15□□□□□ -1.26
HMGN1-201ENST00000288344 MMDQ15546 238 aa7.15□□□□□ -1.26
HMGN1-201ENST00000288344 C2orf68Q2NKX9 166 aa7.15□□□□□ -1.26
HMGN1-201ENST00000288344 TMEM69Q5SWH9 247 aa7.15□□□□□ -1.26
HMGN1-201ENST00000288344 CLVS1Q8IUQ0 354 aaPredicted RBP7.15□□□□□ -1.26
HMGN1-201ENST00000288344 ZNF645Q8N7E2 425 aa7.15□□□□□ -1.26
HMGN1-201ENST00000288344 RAB2BQ8WUD1 216 aa7.15□□□□□ -1.26
HMGN1-201ENST00000288344 RASL11BQ9BPW5 248 aa7.15□□□□□ -1.26
HMGN1-201ENST00000288344 KLK15Q9H2R5 256 aa7.15□□□□□ -1.26
HMGN1-201ENST00000288344 FBXL15Q9H469 300 aa7.15□□□□□ -1.26
HMGN1-201ENST00000288344 ZFP57Q9NU63 452 aa7.15□□□□□ -1.26
HMGN1-201ENST00000288344 TSSC4Q9Y5U2 329 aaPredicted RBP7.15□□□□□ -1.26
HMGN1-201ENST00000288344 MEIS3P1A6NDR6 274 aa7.14□□□□□ -1.27
HMGN1-201ENST00000288344 G3V318 75 aa7.14□□□□□ -1.27
HMGN1-201ENST00000288344 SULT1C2O00338 296 aa7.14□□□□□ -1.27
HMGN1-201ENST00000288344 ATP6V0E1O15342 81 aa7.14□□□□□ -1.27
HMGN1-201ENST00000288344 KCNAB3O43448 404 aa7.14□□□□□ -1.27
HMGN1-201ENST00000288344 SPDEFO95238 335 aa7.14□□□□□ -1.27
HMGN1-201ENST00000288344 BRI3O95415 125 aa7.14□□□□□ -1.27
HMGN1-201ENST00000288344 PPYP01298 95 aa7.14□□□□□ -1.27
HMGN1-201ENST00000288344 ELANEP08246 267 aa7.14□□□□□ -1.27
HMGN1-201ENST00000288344 CSF1P09603 554 aa7.14□□□□□ -1.27
HMGN1-201ENST00000288344 FCGR2CP31995 323 aa7.14□□□□□ -1.27
HMGN1-201ENST00000288344 PRSS3P35030 304 aa7.14□□□□□ -1.27
HMGN1-201ENST00000288344 CDX1P47902 265 aaPredicted RBP7.14□□□□□ -1.27
HMGN1-201ENST00000288344 RFX2P48378 723 aa7.14□□□□□ -1.27
HMGN1-201ENST00000288344 THBS3P49746 956 aa7.14□□□□□ -1.27
HMGN1-201ENST00000288344 PJVKQ0ZLH3 352 aa7.14□□□□□ -1.27
HMGN1-201ENST00000288344 FOXE3Q13461 319 aa7.14□□□□□ -1.27
HMGN1-201ENST00000288344 C9orf152Q5JTZ5 239 aa7.14□□□□□ -1.27
HMGN1-201ENST00000288344 ASPHD1Q5U4P2 390 aa7.14□□□□□ -1.27
HMGN1-201ENST00000288344 WFDC3Q8IUB2 231 aa7.14□□□□□ -1.27
HMGN1-201ENST00000288344 COMMD1Q8N668 190 aa7.14□□□□□ -1.27
HMGN1-201ENST00000288344 FLYWCH2Q96CP2 140 aaKnown RBP7.14□□□□□ -1.27
HMGN1-201ENST00000288344 P2RX4Q99571 388 aa7.14□□□□□ -1.27
HMGN1-201ENST00000288344 GINS4Q9BRT9 223 aa7.14□□□□□ -1.27
HMGN1-201ENST00000288344 SCPEP1Q9HB40 452 aa7.14□□□□□ -1.27
HMGN1-201ENST00000288344 CCL28Q9NRJ3 127 aa7.14□□□□□ -1.27
HMGN1-201ENST00000288344 SLC35D1Q9NTN3 355 aa7.14□□□□□ -1.27
HMGN1-201ENST00000288344 SLC22A5O76082 557 aa7.13□□□□□ -1.27
HMGN1-201ENST00000288344 RPL23AP62750 156 aaKnown RBP7.13□□□□□ -1.27
HMGN1-201ENST00000288344 CDK10Q15131 360 aa7.13□□□□□ -1.27
HMGN1-201ENST00000288344 KLK9Q2XQG4 91 aa7.13□□□□□ -1.27
HMGN1-201ENST00000288344 AKIRIN2Q53H80 203 aa7.13□□□□□ -1.27
HMGN1-201ENST00000288344 AADACL3Q5VUY0 350 aa7.13□□□□□ -1.27
HMGN1-201ENST00000288344 TEX38Q6PEX7 206 aa7.13□□□□□ -1.27
HMGN1-201ENST00000288344 PPP1R27Q86WC6 154 aa7.13□□□□□ -1.27
HMGN1-201ENST00000288344 FOXRED2Q8IWF2 684 aa7.13□□□□□ -1.27
HMGN1-201ENST00000288344 ZBTB34Q8NCN2 500 aa7.13□□□□□ -1.27
HMGN1-201ENST00000288344 FAM110DQ8TAY7 271 aaPredicted RBP7.13□□□□□ -1.27
HMGN1-201ENST00000288344 ISOC1Q96CN7 298 aa7.13□□□□□ -1.27
HMGN1-201ENST00000288344 ADTRPQ96IZ2 230 aa7.13□□□□□ -1.27
HMGN1-201ENST00000288344 GPHA2Q96T91 129 aa7.13□□□□□ -1.27
HMGN1-201ENST00000288344 NECAP2Q9NVZ3 263 aa7.13□□□□□ -1.27
HMGN1-201ENST00000288344 CCDC59Q9P031 241 aaKnown RBP7.13□□□□□ -1.27
HMGN1-201ENST00000288344 KLK11Q9UBX7 282 aa7.13□□□□□ -1.27
HMGN1-201ENST00000288344 MTFP1Q9UDX5 166 aa7.13□□□□□ -1.27
HMGN1-201ENST00000288344 KLK9Q9UKQ9 250 aa7.13□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 52.7 ms