RNA–Protein interactions for RNA: ENST00000285116.7

SKA1-201, Transcript of spindle and kinetochore associated complex subunit 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene SKA1, Length 2,905 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKA1-201ENST00000285116 OR2M7Q8NG81 312 aa8.74□□□□□ -1.01
SKA1-201ENST00000285116 DTD1Q8TEA8 209 aa8.74□□□□□ -1.01
SKA1-201ENST00000285116 YPEL2Q96QA6 119 aa8.74□□□□□ -1.01
SKA1-201ENST00000285116 OR4C12Q96R67 309 aa8.74□□□□□ -1.01
SKA1-201ENST00000285116 OR2J1Q9GZK6 312 aa8.74□□□□□ -1.01
SKA1-201ENST00000285116 A0A0U1RQK1 487 aa8.74□□□□□ -1.01
SKA1-201ENST00000285116 CTXND1A0A1B0GTU2 59 aa8.74□□□□□ -1.01
SKA1-201ENST00000285116 ZNF320A2RRD8 509 aa8.74□□□□□ -1.01
SKA1-201ENST00000285116 ZNF503-AS2A6NEH8 195 aa8.74□□□□□ -1.01
SKA1-201ENST00000285116 SYNGR4O95473 234 aa8.74□□□□□ -1.01
SKA1-201ENST00000285116 TNFSF10P50591 281 aa8.74□□□□□ -1.01
SKA1-201ENST00000285116 PPP1CBP62140 327 aa8.74□□□□□ -1.01
SKA1-201ENST00000285116 PAFAH1B2P68402 229 aa8.74□□□□□ -1.01
SKA1-201ENST00000285116 EIF4EBP1Q13541 118 aaPredicted RBP8.74□□□□□ -1.01
SKA1-201ENST00000285116 TMEM249Q2WGJ8 235 aa8.74□□□□□ -1.01
SKA1-201ENST00000285116 FAM78BQ5VT40 261 aa8.74□□□□□ -1.01
SKA1-201ENST00000285116 CST9LP1Q5W188 147 aa8.74□□□□□ -1.01
SKA1-201ENST00000285116 TOMM20LQ6UXN7 152 aa8.74□□□□□ -1.01
SKA1-201ENST00000285116 CMTM2Q8TAZ6 248 aa8.74□□□□□ -1.01
SKA1-201ENST00000285116 NEIL1Q96FI4 390 aaPredicted RBP8.74□□□□□ -1.01
SKA1-201ENST00000285116 HSPB7Q9UBY9 170 aa8.74□□□□□ -1.01
SKA1-201ENST00000285116 WISP2O76076 250 aa8.73□□□□□ -1.01
SKA1-201ENST00000285116 IGKV1D-33P01593 117 aa8.73□□□□□ -1.01
SKA1-201ENST00000285116 IGKV1-33P01594 117 aa8.73□□□□□ -1.01
SKA1-201ENST00000285116 CD82P27701 267 aa8.73□□□□□ -1.01
SKA1-201ENST00000285116 PLP2Q04941 152 aa8.73□□□□□ -1.01
SKA1-201ENST00000285116 VWC2Q2TAL6 325 aa8.73□□□□□ -1.01
SKA1-201ENST00000285116 DCAF12Q5T6F0 453 aa8.73□□□□□ -1.01
SKA1-201ENST00000285116 TMEM144Q7Z5S9 345 aa8.73□□□□□ -1.01
SKA1-201ENST00000285116 ASCL3Q9NQ33 180 aa8.73□□□□□ -1.01
SKA1-201ENST00000285116 C1QTNF9BB2RNN3 333 aa8.73□□□□□ -1.01
SKA1-201ENST00000285116 SELEP16581 610 aa8.73□□□□□ -1.01
SKA1-201ENST00000285116 GCH1P30793 250 aa8.73□□□□□ -1.01
SKA1-201ENST00000285116 TPPP2P59282 170 aa8.73□□□□□ -1.01
SKA1-201ENST00000285116 FOXL1Q12952 345 aa8.73□□□□□ -1.01
SKA1-201ENST00000285116 ZNF146Q15072 292 aa8.73□□□□□ -1.01
SKA1-201ENST00000285116 COL5A1-AS1Q5SY13 56 aa8.73□□□□□ -1.01
SKA1-201ENST00000285116 C6orf15Q6UXA7 325 aaPredicted RBP8.73□□□□□ -1.01
SKA1-201ENST00000285116 APH1AQ96BI3 265 aa8.73□□□□□ -1.01
SKA1-201ENST00000285116 SPRY4Q9C004 299 aa8.73□□□□□ -1.01
SKA1-201ENST00000285116 ZFP30Q9Y2G7 519 aa8.73□□□□□ -1.01
SKA1-201ENST00000285116 UBE2L5PA0A1B0GUS4 154 aa8.72□□□□□ -1.01
SKA1-201ENST00000285116 MLNRO43193 412 aa8.72□□□□□ -1.01
SKA1-201ENST00000285116 NUPR1O60356 82 aa8.72□□□□□ -1.01
SKA1-201ENST00000285116 NEURL1O76050 574 aa8.72□□□□□ -1.01
SKA1-201ENST00000285116 ACP1P24666 158 aa8.72□□□□□ -1.01
SKA1-201ENST00000285116 CHRNA7P36544 502 aa8.72□□□□□ -1.01
SKA1-201ENST00000285116 SOX8P57073 446 aa8.72□□□□□ -1.01
SKA1-201ENST00000285116 OR5I1Q13606 314 aa8.72□□□□□ -1.01
SKA1-201ENST00000285116 TPTE2P1Q5T6R2 138 aa8.72□□□□□ -1.01
SKA1-201ENST00000285116 TUSC5Q8IXB3 177 aa8.72□□□□□ -1.01
SKA1-201ENST00000285116 OR51H1Q8NH63 302 aa8.72□□□□□ -1.01
SKA1-201ENST00000285116 CT55Q8WUE5 264 aa8.72□□□□□ -1.01
SKA1-201ENST00000285116 SIAH2O43255 324 aa8.72□□□□□ -1.01
SKA1-201ENST00000285116 NGFP01138 241 aa8.72□□□□□ -1.01
SKA1-201ENST00000285116 OTX2P32243 289 aa8.72□□□□□ -1.01
SKA1-201ENST00000285116 SLC38A11Q08AI6 406 aa8.72□□□□□ -1.01
SKA1-201ENST00000285116 SRSF6Q13247 344 aaKnown RBP8.72□□□□□ -1.01
SKA1-201ENST00000285116 IZUMO4Q1ZYL8 232 aa8.72□□□□□ -1.01
SKA1-201ENST00000285116 VAMP8Q9BV40 100 aa8.72□□□□□ -1.01
SKA1-201ENST00000285116 RTL8AQ9BWD3 113 aa8.72□□□□□ -1.01
SKA1-201ENST00000285116 OR51B6Q9H340 312 aa8.72□□□□□ -1.01
SKA1-201ENST00000285116 SLC25A22Q9H936 323 aa8.72□□□□□ -1.01
SKA1-201ENST00000285116 OR1A1Q9P1Q5 309 aa8.72□□□□□ -1.01
SKA1-201ENST00000285116 POLDIP2Q9Y2S7 368 aa8.72□□□□□ -1.01
SKA1-201ENST00000285116 A0A1B0GUS0 222 aa8.71□□□□□ -1.01
SKA1-201ENST00000285116 TLE1Q04724 770 aa8.71□□□□□ -1.01
SKA1-201ENST00000285116 SPANXN5Q5MJ07 72 aa8.71□□□□□ -1.01
SKA1-201ENST00000285116 NUFIP2Q7Z417 695 aaKnown RBP8.71□□□□□ -1.01
SKA1-201ENST00000285116 BATF2Q8N1L9 274 aa8.71□□□□□ -1.01
SKA1-201ENST00000285116 FAM216AQ8WUB2 273 aa8.71□□□□□ -1.01
SKA1-201ENST00000285116 ASH1LQ9NR48 2969 aaKnown RBP8.71□□□□□ -1.01
SKA1-201ENST00000285116 A0A096LPE4 126 aa8.71□□□□□ -1.02
SKA1-201ENST00000285116 A0A1W2PPZ6 126 aa8.71□□□□□ -1.02
SKA1-201ENST00000285116 ESDP10768 282 aa8.71□□□□□ -1.02
SKA1-201ENST00000285116 YPEL3P61236 119 aaPredicted RBP8.71□□□□□ -1.02
SKA1-201ENST00000285116 GABRA6Q16445 453 aa8.71□□□□□ -1.02
SKA1-201ENST00000285116 BATFQ16520 125 aa8.71□□□□□ -1.02
SKA1-201ENST00000285116 FBXW9Q5XUX1 488 aa8.71□□□□□ -1.02
SKA1-201ENST00000285116 ACSM6Q6P461 480 aa8.71□□□□□ -1.02
SKA1-201ENST00000285116 Q6ZWC4 215 aa8.71□□□□□ -1.02
SKA1-201ENST00000285116 LINC01551Q86U37 167 aa8.71□□□□□ -1.02
SKA1-201ENST00000285116 DEFB124Q8NES8 71 aa8.71□□□□□ -1.02
SKA1-201ENST00000285116 OR10G9Q8NGN4 311 aa8.71□□□□□ -1.02
SKA1-201ENST00000285116 OR10G7Q8NGN6 311 aa8.71□□□□□ -1.02
SKA1-201ENST00000285116 NANOS1Q8WY41 292 aaKnown RBP8.71□□□□□ -1.02
SKA1-201ENST00000285116 RDH5Q92781 318 aa8.71□□□□□ -1.02
SKA1-201ENST00000285116 BCL2L2Q92843 193 aaPredicted RBP8.71□□□□□ -1.02
SKA1-201ENST00000285116 TMEM147Q9BVK8 224 aa8.71□□□□□ -1.02
SKA1-201ENST00000285116 HES4Q9HCC6 221 aa8.71□□□□□ -1.02
SKA1-201ENST00000285116 PMS2P5A8MQ11 134 aa8.7□□□□□ -1.02
SKA1-201ENST00000285116 HSPB6O14558 160 aa8.7□□□□□ -1.02
SKA1-201ENST00000285116 HS3ST1O14792 307 aa8.7□□□□□ -1.02
SKA1-201ENST00000285116 HMGB3O15347 200 aaKnown RBP8.7□□□□□ -1.02
SKA1-201ENST00000285116 TMPRSS2O15393 492 aa8.7□□□□□ -1.02
SKA1-201ENST00000285116 SELENOTP62341 195 aa8.7□□□□□ -1.02
SKA1-201ENST00000285116 DRAM1Q8N682 238 aa8.7□□□□□ -1.02
SKA1-201ENST00000285116 ZNF645Q8N7E2 425 aa8.7□□□□□ -1.02
SKA1-201ENST00000285116 OR1K1Q8NGR3 316 aa8.7□□□□□ -1.02
SKA1-201ENST00000285116 GATAD1Q8WUU5 269 aa8.7□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms