RNA–Protein interactions for RNA: ENST00000282516.12

NIPBL-201, Transcript of NIPBL, cohesin loading factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NIPBL, Length 10,435 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIPBL-201ENST00000282516 FBXW9Q5XUX1 488 aa7.58□□□□□ -1.2
NIPBL-201ENST00000282516 UNQ5815/PRO19632Q6UWF5 114 aa7.58□□□□□ -1.2
NIPBL-201ENST00000282516 TUBA4BQ9H853 241 aa7.58□□□□□ -1.2
NIPBL-201ENST00000282516 CBLN4Q9NTU7 201 aa7.58□□□□□ -1.2
NIPBL-201ENST00000282516 FRRS1LQ9P0K9 344 aa7.58□□□□□ -1.2
NIPBL-201ENST00000282516 TBL2Q9Y4P3 447 aaKnown RBP7.58□□□□□ -1.2
NIPBL-201ENST00000282516 CCL27Q9Y4X3 112 aa7.58□□□□□ -1.2
NIPBL-201ENST00000282516 QSER1Q2KHR3 1735 aa7.58□□□□□ -1.2
NIPBL-201ENST00000282516 HOXD4P09016 255 aaPredicted RBP7.58□□□□□ -1.2
NIPBL-201ENST00000282516 CXCL3P19876 107 aa7.58□□□□□ -1.2
NIPBL-201ENST00000282516 TMEM30BQ3MIR4 351 aa7.58□□□□□ -1.2
NIPBL-201ENST00000282516 SFXN3Q9BWM7 321 aa7.58□□□□□ -1.2
NIPBL-201ENST00000282516 AGFG2O95081 481 aa7.58□□□□□ -1.2
NIPBL-201ENST00000282516 CLDN14O95500 239 aa7.58□□□□□ -1.2
NIPBL-201ENST00000282516 PF4P02776 101 aa7.58□□□□□ -1.2
NIPBL-201ENST00000282516 VKORC1L1Q8N0U8 176 aa7.58□□□□□ -1.2
NIPBL-201ENST00000282516 IGHV1OR21-1A0A087WYE8 117 aa7.57□□□□□ -1.2
NIPBL-201ENST00000282516 FCARP24071 287 aa7.57□□□□□ -1.2
NIPBL-201ENST00000282516 THSD4Q6ZMP0 1018 aa7.57□□□□□ -1.2
NIPBL-201ENST00000282516 CKS1BP61024 79 aa7.57□□□□□ -1.2
NIPBL-201ENST00000282516 SSBP4Q9BWG4 385 aaPredicted RBP7.57□□□□□ -1.2
NIPBL-201ENST00000282516 METTL1Q9UBP6 276 aaKnown RBP7.57□□□□□ -1.2
NIPBL-201ENST00000282516 C2CD4DB7Z1M9 353 aa7.57□□□□□ -1.2
NIPBL-201ENST00000282516 SYNGR3O43761 229 aa7.57□□□□□ -1.2
NIPBL-201ENST00000282516 OR51G1Q8NGK1 321 aa7.57□□□□□ -1.2
NIPBL-201ENST00000282516 EEF1AKMT3Q96AZ1 226 aa7.57□□□□□ -1.2
NIPBL-201ENST00000282516 PKIBQ9C010 78 aa7.57□□□□□ -1.2
NIPBL-201ENST00000282516 PLXNA1Q9UIW2 1896 aa7.57□□□□□ -1.2
NIPBL-201ENST00000282516 A0A1B0GTH9 108 aa7.57□□□□□ -1.2
NIPBL-201ENST00000282516 CTSVO60911 334 aa7.57□□□□□ -1.2
NIPBL-201ENST00000282516 NIT1Q86X76 327 aa7.57□□□□□ -1.2
NIPBL-201ENST00000282516 LHX9Q9NQ69 397 aa7.57□□□□□ -1.2
NIPBL-201ENST00000282516 PAPPA2Q9BXP8 1791 aa7.57□□□□□ -1.2
NIPBL-201ENST00000282516 PATE4P0C8F1 98 aa7.57□□□□□ -1.2
NIPBL-201ENST00000282516 AGAP20933 346 aa7.57□□□□□ -1.2
NIPBL-201ENST00000282516 SPSB4Q96A44 273 aa7.57□□□□□ -1.2
NIPBL-201ENST00000282516 SDF2L1Q9HCN8 221 aa7.57□□□□□ -1.2
NIPBL-201ENST00000282516 YAE1D1Q9NRH1 226 aa7.57□□□□□ -1.2
NIPBL-201ENST00000282516 RPL34P49207 117 aaKnown RBP7.57□□□□□ -1.2
NIPBL-201ENST00000282516 ISXQ2M1V0 245 aa7.57□□□□□ -1.2
NIPBL-201ENST00000282516 DNAJC4Q9NNZ3 241 aa7.57□□□□□ -1.2
NIPBL-201ENST00000282516 NXT2Q9NPJ8 142 aaKnown RBP7.57□□□□□ -1.2
NIPBL-201ENST00000282516 GBF1Q92538 1859 aa7.57□□□□□ -1.2
NIPBL-201ENST00000282516 TRAV8-6A0A0B4J262 113 aa7.57□□□□□ -1.2
NIPBL-201ENST00000282516 MAGEA5P43359 124 aa7.57□□□□□ -1.2
NIPBL-201ENST00000282516 UCNP55089 124 aa7.57□□□□□ -1.2
NIPBL-201ENST00000282516 NKG7Q16617 165 aa7.57□□□□□ -1.2
NIPBL-201ENST00000282516 SAPCD1Q5SSQ6 148 aa7.57□□□□□ -1.2
NIPBL-201ENST00000282516 MIC13Q5XKP0 118 aa7.57□□□□□ -1.2
NIPBL-201ENST00000282516 AMER3Q8N944 861 aa7.57□□□□□ -1.2
NIPBL-201ENST00000282516 DERL1Q9BUN8 251 aa7.57□□□□□ -1.2
NIPBL-201ENST00000282516 DLEC1Q9Y238 1755 aa7.57□□□□□ -1.2
NIPBL-201ENST00000282516 MGST3O14880 152 aa7.57□□□□□ -1.2
NIPBL-201ENST00000282516 IGLV3-25P01717 112 aa7.57□□□□□ -1.2
NIPBL-201ENST00000282516 ZNF688P0C7X2 276 aa7.57□□□□□ -1.2
NIPBL-201ENST00000282516 ASIPP42127 132 aa7.57□□□□□ -1.2
NIPBL-201ENST00000282516 GGTLC2Q14390 218 aa7.57□□□□□ -1.2
NIPBL-201ENST00000282516 VAX1Q5SQQ9 334 aa7.57□□□□□ -1.2
NIPBL-201ENST00000282516 HCP5Q6MZN7 132 aa7.57□□□□□ -1.2
NIPBL-201ENST00000282516 TP53I13Q8NBR0 393 aaPredicted RBP7.57□□□□□ -1.2
NIPBL-201ENST00000282516 HILPDAQ9Y5L2 63 aa7.57□□□□□ -1.2
NIPBL-201ENST00000282516 IGHV5-51A0A0C4DH38 117 aa7.56□□□□□ -1.2
NIPBL-201ENST00000282516 A0A0U1RQV5 110 aa7.56□□□□□ -1.2
NIPBL-201ENST00000282516 P2RY6Q15077 328 aa7.56□□□□□ -1.2
NIPBL-201ENST00000282516 DEFB124Q8NES8 71 aa7.56□□□□□ -1.2
NIPBL-201ENST00000282516 SRSF12Q8WXF0 261 aaKnown RBP7.56□□□□□ -1.2
NIPBL-201ENST00000282516 V9GYH0 126 aa7.56□□□□□ -1.2
NIPBL-201ENST00000282516 CCL21O00585 134 aa7.56□□□□□ -1.2
NIPBL-201ENST00000282516 MPZL1O95297 269 aa7.56□□□□□ -1.2
NIPBL-201ENST00000282516 ERGP11308 486 aa7.56□□□□□ -1.2
NIPBL-201ENST00000282516 LRTM2Q8N967 370 aa7.56□□□□□ -1.2
NIPBL-201ENST00000282516 KCNS1Q96KK3 526 aa7.56□□□□□ -1.2
NIPBL-201ENST00000282516 TNFRSF12AQ9NP84 129 aa7.56□□□□□ -1.2
NIPBL-201ENST00000282516 TTC9CQ8N5M4 171 aa7.56□□□□□ -1.2
NIPBL-201ENST00000282516 OR11H7Q8NGC8 314 aa7.56□□□□□ -1.2
NIPBL-201ENST00000282516 ZNF236Q9UL36 1845 aa7.56□□□□□ -1.2
NIPBL-201ENST00000282516 DYSFO75923 2080 aa7.56□□□□□ -1.2
NIPBL-201ENST00000282516 PPIAL4EA0A075B759 164 aa7.56□□□□□ -1.2
NIPBL-201ENST00000282516 PPIAL4DF5H284 164 aa7.56□□□□□ -1.2
NIPBL-201ENST00000282516 PPIAL4FP0DN26 164 aa7.56□□□□□ -1.2
NIPBL-201ENST00000282516 ATP5IP56385 69 aaPredicted RBP7.56□□□□□ -1.2
NIPBL-201ENST00000282516 OR5AN1Q8NGI8 311 aa7.56□□□□□ -1.2
NIPBL-201ENST00000282516 MS4A6AQ9H2W1 248 aa7.56□□□□□ -1.2
NIPBL-201ENST00000282516 SLC6A13Q9NSD5 602 aa7.56□□□□□ -1.2
NIPBL-201ENST00000282516 PPIAL4AQ9Y536 164 aa7.56□□□□□ -1.2
NIPBL-201ENST00000282516 A0A1W2PPE3 182 aa7.56□□□□□ -1.2
NIPBL-201ENST00000282516 PNLIPP16233 465 aa7.56□□□□□ -1.2
NIPBL-201ENST00000282516 SPEM2Q0P670 501 aa7.56□□□□□ -1.2
NIPBL-201ENST00000282516 ATG4DQ86TL0 474 aaPredicted RBP7.56□□□□□ -1.2
NIPBL-201ENST00000282516 SCGB3A1Q96QR1 104 aa7.56□□□□□ -1.2
NIPBL-201ENST00000282516 TRAV8-2A0A0B4J237 113 aa7.56□□□□□ -1.2
NIPBL-201ENST00000282516 GCM2O75603 506 aaPredicted RBP7.56□□□□□ -1.2
NIPBL-201ENST00000282516 UNQ9370/PRO34162Q6UXP9 181 aa7.56□□□□□ -1.2
NIPBL-201ENST00000282516 RND2P52198 227 aa7.56□□□□□ -1.2
NIPBL-201ENST00000282516 SLC25A53Q5H9E4 307 aa7.56□□□□□ -1.2
NIPBL-201ENST00000282516 SDHCQ99643 169 aaPredicted RBP7.56□□□□□ -1.2
NIPBL-201ENST00000282516 WDR54Q9H977 334 aa7.56□□□□□ -1.2
NIPBL-201ENST00000282516 ASPDHA6ND91 283 aa7.55□□□□□ -1.2
NIPBL-201ENST00000282516 MYF5P13349 255 aa7.55□□□□□ -1.2
NIPBL-201ENST00000282516 SLC25A2Q9BXI2 301 aa7.55□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 50.5 ms