RNA–Protein interactions for RNA: ENST00000266679.8

CPSF6-201, Transcript of cleavage and polyadenylation specific factor 6, humanhuman

TSL 1 (best) BASIC

Gene CPSF6, Length 2,229 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF6-201ENST00000266679 ABHD17AQ96GS6 310 aa10.73□□□□□ -0.69
CPSF6-201ENST00000266679 NIPSNAP3BQ9BS92 247 aa10.73□□□□□ -0.69
CPSF6-201ENST00000266679 MAP1LC3BQ9GZQ8 125 aa10.73□□□□□ -0.69
CPSF6-201ENST00000266679 FAM234AQ9H0X4 552 aa10.73□□□□□ -0.69
CPSF6-201ENST00000266679 GNG12Q9UBI6 72 aa10.73□□□□□ -0.69
CPSF6-201ENST00000266679 DOPEY2Q9Y3R5 2298 aa10.73□□□□□ -0.69
CPSF6-201ENST00000266679 CACNA1DQ01668 2161 aa10.73□□□□□ -0.69
CPSF6-201ENST00000266679 DOCK11Q5JSL3 2073 aa10.72□□□□□ -0.69
CPSF6-201ENST00000266679 ZNF98A6NK75 572 aa10.72□□□□□ -0.69
CPSF6-201ENST00000266679 CEBPZOSA8MTT3 80 aa10.72□□□□□ -0.69
CPSF6-201ENST00000266679 IGHV3-13P01766 116 aa10.72□□□□□ -0.69
CPSF6-201ENST00000266679 IGHV3-7P01780 117 aa10.72□□□□□ -0.69
CPSF6-201ENST00000266679 IFNA4P05014 189 aa10.72□□□□□ -0.69
CPSF6-201ENST00000266679 S100A6P06703 90 aa10.72□□□□□ -0.69
CPSF6-201ENST00000266679 ADH4P08319 380 aa10.72□□□□□ -0.69
CPSF6-201ENST00000266679 OR2B8PP59922 312 aa10.72□□□□□ -0.69
CPSF6-201ENST00000266679 SERF2P84101 59 aa10.72□□□□□ -0.69
CPSF6-201ENST00000266679 C1orf185Q5T7R7 199 aa10.72□□□□□ -0.69
CPSF6-201ENST00000266679 C1orf174Q8IYL3 243 aa10.72□□□□□ -0.69
CPSF6-201ENST00000266679 GCSAMQ8N6F7 178 aa10.72□□□□□ -0.69
CPSF6-201ENST00000266679 FAM169BQ8N8A8 192 aa10.72□□□□□ -0.69
CPSF6-201ENST00000266679 TVP23CQ96ET8 276 aa10.72□□□□□ -0.69
CPSF6-201ENST00000266679 MEGF10Q96KG7 1140 aa10.72□□□□□ -0.69
CPSF6-201ENST00000266679 HSD17B10Q99714 261 aaKnown RBP10.72□□□□□ -0.69
CPSF6-201ENST00000266679 CISD1Q9NZ45 108 aaKnown RBP10.72□□□□□ -0.69
CPSF6-201ENST00000266679 RAI1Q7Z5J4 1906 aaPredicted RBP10.72□□□□□ -0.69
CPSF6-201ENST00000266679 FGF7P21781 194 aa10.72□□□□□ -0.69
CPSF6-201ENST00000266679 KLF3P57682 345 aaPredicted RBP10.72□□□□□ -0.69
CPSF6-201ENST00000266679 HTD2P86397 168 aa10.72□□□□□ -0.69
CPSF6-201ENST00000266679 TFF3Q07654 80 aa10.72□□□□□ -0.69
CPSF6-201ENST00000266679 EIF2S3LQ2VIR3 472 aaKnown RBP10.72□□□□□ -0.69
CPSF6-201ENST00000266679 NCR3LG1Q68D85 454 aa10.72□□□□□ -0.69
CPSF6-201ENST00000266679 ACSM6Q6P461 480 aa10.72□□□□□ -0.69
CPSF6-201ENST00000266679 ITLN1Q8WWA0 313 aa10.72□□□□□ -0.69
CPSF6-201ENST00000266679 R3HDM4Q96D70 268 aa10.72□□□□□ -0.69
CPSF6-201ENST00000266679 MUCL1Q96DR8 90 aa10.72□□□□□ -0.69
CPSF6-201ENST00000266679 YPEL4Q96NS1 127 aa10.72□□□□□ -0.69
CPSF6-201ENST00000266679 C12orf57Q99622 126 aa10.72□□□□□ -0.69
CPSF6-201ENST00000266679 TMEM147Q9BVK8 224 aa10.72□□□□□ -0.69
CPSF6-201ENST00000266679 TP53TG5Q9Y2B4 290 aa10.72□□□□□ -0.69
CPSF6-201ENST00000266679 MARCH11A6NNE9 402 aa10.71□□□□□ -0.69
CPSF6-201ENST00000266679 FCGR3BO75015 233 aa10.71□□□□□ -0.69
CPSF6-201ENST00000266679 IGKV1D-33P01593 117 aa10.71□□□□□ -0.69
CPSF6-201ENST00000266679 IGKV1-33P01594 117 aa10.71□□□□□ -0.69
CPSF6-201ENST00000266679 CRYAAP02489 173 aa10.71□□□□□ -0.69
CPSF6-201ENST00000266679 EDDM3BP56851 147 aa10.71□□□□□ -0.69
CPSF6-201ENST00000266679 TLE1Q04724 770 aa10.71□□□□□ -0.69
CPSF6-201ENST00000266679 TIMM23BQ5SRD1 257 aa10.71□□□□□ -0.69
CPSF6-201ENST00000266679 FAM90A2PQ658T7 463 aa10.71□□□□□ -0.69
CPSF6-201ENST00000266679 ZNF343Q6P1L6 599 aa10.71□□□□□ -0.69
CPSF6-201ENST00000266679 TCTEX1D1Q8N7M0 179 aa10.71□□□□□ -0.69
CPSF6-201ENST00000266679 ZNRF1Q8ND25 227 aa10.71□□□□□ -0.69
CPSF6-201ENST00000266679 PINX1Q96BK5 328 aaKnown RBP10.71□□□□□ -0.69
CPSF6-201ENST00000266679 SNX22Q96L94 193 aa10.71□□□□□ -0.69
CPSF6-201ENST00000266679 AGMATQ9BSE5 352 aa10.71□□□□□ -0.69
CPSF6-201ENST00000266679 QTRT1Q9BXR0 403 aaKnown RBP10.71□□□□□ -0.69
CPSF6-201ENST00000266679 USP9XQ93008 2570 aaPredicted RBP10.71□□□□□ -0.7
CPSF6-201ENST00000266679 HCFC1P51610 2035 aa10.7□□□□□ -0.7
CPSF6-201ENST00000266679 PMS2P5A8MQ11 134 aa10.7□□□□□ -0.7
CPSF6-201ENST00000266679 MGST3O14880 152 aa10.7□□□□□ -0.7
CPSF6-201ENST00000266679 HMGB3O15347 200 aaKnown RBP10.7□□□□□ -0.7
CPSF6-201ENST00000266679 OR9G9P0C7N8 305 aa10.7□□□□□ -0.7
CPSF6-201ENST00000266679 FAM201AQ5SY85 155 aa10.7□□□□□ -0.7
CPSF6-201ENST00000266679 EDARADDQ8WWZ3 215 aa10.7□□□□□ -0.7
CPSF6-201ENST00000266679 SLC25A22Q9H936 323 aa10.7□□□□□ -0.7
CPSF6-201ENST00000266679 LAMP3Q9UQV4 416 aa10.7□□□□□ -0.7
CPSF6-201ENST00000266679 TIMM9Q9Y5J7 89 aa10.7□□□□□ -0.7
CPSF6-201ENST00000266679 MAST4O15021 2626 aa10.7□□□□□ -0.7
CPSF6-201ENST00000266679 M0R1X1 148 aa10.7□□□□□ -0.7
CPSF6-201ENST00000266679 SELLP14151 372 aa10.7□□□□□ -0.7
CPSF6-201ENST00000266679 DUTP33316 252 aaKnown RBP10.7□□□□□ -0.7
CPSF6-201ENST00000266679 PAX5Q02548 391 aa10.7□□□□□ -0.7
CPSF6-201ENST00000266679 RPL39P5Q59GN2 51 aa10.7□□□□□ -0.7
CPSF6-201ENST00000266679 IGFL3Q6UXB1 125 aa10.7□□□□□ -0.7
CPSF6-201ENST00000266679 HEPN1Q6WQI6 88 aa10.7□□□□□ -0.7
CPSF6-201ENST00000266679 Q6ZS92 163 aa10.7□□□□□ -0.7
CPSF6-201ENST00000266679 SSX9Q7RTT3 188 aa10.7□□□□□ -0.7
CPSF6-201ENST00000266679 SLC35E3Q7Z769 313 aa10.7□□□□□ -0.7
CPSF6-201ENST00000266679 OR10P1Q8NGE3 313 aa10.7□□□□□ -0.7
CPSF6-201ENST00000266679 OR10G4Q8NGN3 311 aa10.7□□□□□ -0.7
CPSF6-201ENST00000266679 PPP1R35Q8TAP8 253 aa10.7□□□□□ -0.7
CPSF6-201ENST00000266679 MALSU1Q96EH3 234 aa10.7□□□□□ -0.7
CPSF6-201ENST00000266679 SLC39A9Q9NUM3 307 aa10.7□□□□□ -0.7
CPSF6-201ENST00000266679 JPT1Q9UK76 154 aa10.7□□□□□ -0.7
CPSF6-201ENST00000266679 C5orf52A6NGY3 159 aa10.69□□□□□ -0.7
CPSF6-201ENST00000266679 IFNA1P01562 189 aa10.69□□□□□ -0.7
CPSF6-201ENST00000266679 ATP6V1FQ16864 119 aa10.69□□□□□ -0.7
CPSF6-201ENST00000266679 MORN2Q502X0 79 aa10.69□□□□□ -0.7
CPSF6-201ENST00000266679 FAM90A1Q86YD7 464 aa10.69□□□□□ -0.7
CPSF6-201ENST00000266679 RBMXL3Q8N7X1 1067 aaKnown RBP10.69□□□□□ -0.7
CPSF6-201ENST00000266679 CA5BP1Q8WTZ4 195 aa10.69□□□□□ -0.7
CPSF6-201ENST00000266679 LEAP2Q969E1 77 aa10.69□□□□□ -0.7
CPSF6-201ENST00000266679 LHX4Q969G2 390 aa10.69□□□□□ -0.7
CPSF6-201ENST00000266679 CIB3Q96Q77 187 aaPredicted RBP10.69□□□□□ -0.7
CPSF6-201ENST00000266679 URGCP-MRPS24S4R325 110 aa10.69□□□□□ -0.7
CPSF6-201ENST00000266679 A0A087WWC5 75 aa10.69□□□□□ -0.7
CPSF6-201ENST00000266679 PROP1O75360 226 aa10.69□□□□□ -0.7
CPSF6-201ENST00000266679 SFTPCP11686 197 aa10.69□□□□□ -0.7
CPSF6-201ENST00000266679 GZMHP20718 246 aa10.69□□□□□ -0.7
CPSF6-201ENST00000266679 MAS1LP35410 378 aa10.69□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms