RNA–Protein interactions for RNA: ENST00000263780.8

CHMP2B-201, Transcript of charged multivesicular body protein 2B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHMP2B, Length 2,557 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP2B-201ENST00000263780 SIRPB1O00241 398 aa10.39□□□□□ -0.75
CHMP2B-201ENST00000263780 RAMP3O60896 148 aa10.39□□□□□ -0.75
CHMP2B-201ENST00000263780 TRAPPC6AO75865 159 aa10.39□□□□□ -0.75
CHMP2B-201ENST00000263780 OR2H2O95918 312 aa10.39□□□□□ -0.75
CHMP2B-201ENST00000263780 REG1AP05451 166 aa10.39□□□□□ -0.75
CHMP2B-201ENST00000263780 STAG3L2P0CL84 134 aa10.39□□□□□ -0.75
CHMP2B-201ENST00000263780 STAG3L3P0CL85 134 aa10.39□□□□□ -0.75
CHMP2B-201ENST00000263780 KRTDAPP60985 99 aa10.39□□□□□ -0.75
CHMP2B-201ENST00000263780 IL11RAQ14626 422 aa10.39□□□□□ -0.75
CHMP2B-201ENST00000263780 PDLIM3Q53GG5 364 aaPredicted RBP10.39□□□□□ -0.75
CHMP2B-201ENST00000263780 LRP11Q86VZ4 500 aa10.39□□□□□ -0.75
CHMP2B-201ENST00000263780 ABHD3Q8WU67 409 aa10.39□□□□□ -0.75
CHMP2B-201ENST00000263780 RTL8AQ9BWD3 113 aa10.39□□□□□ -0.75
CHMP2B-201ENST00000263780 PRDM6Q9NQX0 595 aa10.39□□□□□ -0.75
CHMP2B-201ENST00000263780 KIAA1549Q9HCM3 1950 aa10.39□□□□□ -0.75
CHMP2B-201ENST00000263780 S1PR2O95136 353 aa10.38□□□□□ -0.75
CHMP2B-201ENST00000263780 TDGF1P13385 188 aa10.38□□□□□ -0.75
CHMP2B-201ENST00000263780 CCL2P13500 99 aa10.38□□□□□ -0.75
CHMP2B-201ENST00000263780 EDDM3BP56851 147 aa10.38□□□□□ -0.75
CHMP2B-201ENST00000263780 SPATA45Q537H7 98 aa10.38□□□□□ -0.75
CHMP2B-201ENST00000263780 DCAF12Q5T6F0 453 aa10.38□□□□□ -0.75
CHMP2B-201ENST00000263780 SMRP1Q8NCR6 262 aa10.38□□□□□ -0.75
CHMP2B-201ENST00000263780 NINJ1Q92982 152 aa10.38□□□□□ -0.75
CHMP2B-201ENST00000263780 ZDHHC16Q969W1 377 aa10.38□□□□□ -0.75
CHMP2B-201ENST00000263780 POM121L2Q96KW2 1035 aa10.38□□□□□ -0.75
CHMP2B-201ENST00000263780 TXN2Q99757 166 aa10.38□□□□□ -0.75
CHMP2B-201ENST00000263780 OR2D2Q9H210 308 aa10.38□□□□□ -0.75
CHMP2B-201ENST00000263780 GAL3ST2Q9H3Q3 398 aa10.38□□□□□ -0.75
CHMP2B-201ENST00000263780 A0A096LPE4 126 aa10.38□□□□□ -0.75
CHMP2B-201ENST00000263780 A0A1W2PPZ6 126 aa10.38□□□□□ -0.75
CHMP2B-201ENST00000263780 SNURFLB1AK76 121 aa10.38□□□□□ -0.75
CHMP2B-201ENST00000263780 ZNF253O75346 499 aa10.38□□□□□ -0.75
CHMP2B-201ENST00000263780 IGHV3-9P01782 118 aa10.38□□□□□ -0.75
CHMP2B-201ENST00000263780 ARL14EPLP0DKL9 152 aa10.38□□□□□ -0.75
CHMP2B-201ENST00000263780 STARD4Q96DR4 205 aa10.38□□□□□ -0.75
CHMP2B-201ENST00000263780 LRFN3Q9BTN0 628 aa10.38□□□□□ -0.75
CHMP2B-201ENST00000263780 AKIRIN1Q9H9L7 192 aaPredicted RBP10.38□□□□□ -0.75
CHMP2B-201ENST00000263780 TRBV20OR9-2A0A075B6H5 130 aa10.37□□□□□ -0.75
CHMP2B-201ENST00000263780 SCO2A0A1W2PP80 73 aa10.37□□□□□ -0.75
CHMP2B-201ENST00000263780 A0A1W2PQM1 296 aa10.37□□□□□ -0.75
CHMP2B-201ENST00000263780 TMEM30CPA0ZSE6 113 aa10.37□□□□□ -0.75
CHMP2B-201ENST00000263780 PGPEP1LA6NFU8 196 aa10.37□□□□□ -0.75
CHMP2B-201ENST00000263780 C15orf62A8K5M9 175 aa10.37□□□□□ -0.75
CHMP2B-201ENST00000263780 NGFP01138 241 aa10.37□□□□□ -0.75
CHMP2B-201ENST00000263780 CTRLP40313 264 aa10.37□□□□□ -0.75
CHMP2B-201ENST00000263780 IER3P46695 156 aa10.37□□□□□ -0.75
CHMP2B-201ENST00000263780 COMPP49747 757 aaPredicted RBP10.37□□□□□ -0.75
CHMP2B-201ENST00000263780 HNRNPA3P51991 378 aaKnown RBP10.37□□□□□ -0.75
CHMP2B-201ENST00000263780 KLF3P57682 345 aaPredicted RBP10.37□□□□□ -0.75
CHMP2B-201ENST00000263780 RAB30Q15771 203 aa10.37□□□□□ -0.75
CHMP2B-201ENST00000263780 HLA-BQ31612 363 aa10.37□□□□□ -0.75
CHMP2B-201ENST00000263780 GUSBP11Q6P575 273 aa10.37□□□□□ -0.75
CHMP2B-201ENST00000263780 TIPARPQ7Z3E1 657 aaKnown RBP10.37□□□□□ -0.75
CHMP2B-201ENST00000263780 Q8N7P7 452 aa10.37□□□□□ -0.75
CHMP2B-201ENST00000263780 C11orf52Q96A22 123 aa10.37□□□□□ -0.75
CHMP2B-201ENST00000263780 PRRG4Q9BZD6 226 aa10.37□□□□□ -0.75
CHMP2B-201ENST00000263780 EML6Q6ZMW3 1958 aa10.37□□□□□ -0.75
CHMP2B-201ENST00000263780 NEURL1O76050 574 aa10.37□□□□□ -0.75
CHMP2B-201ENST00000263780 OR5G3P0C626 314 aa10.37□□□□□ -0.75
CHMP2B-201ENST00000263780 PLA2G5P39877 138 aa10.37□□□□□ -0.75
CHMP2B-201ENST00000263780 THBS3P49746 956 aa10.37□□□□□ -0.75
CHMP2B-201ENST00000263780 EIF4EBP1Q13541 118 aaPredicted RBP10.37□□□□□ -0.75
CHMP2B-201ENST00000263780 WIPI1Q5MNZ9 446 aaPredicted RBP10.37□□□□□ -0.75
CHMP2B-201ENST00000263780 LEMD1Q68G75 181 aa10.37□□□□□ -0.75
CHMP2B-201ENST00000263780 MMD2Q8IY49 270 aa10.37□□□□□ -0.75
CHMP2B-201ENST00000263780 FOXJ2Q9P0K8 574 aa10.37□□□□□ -0.75
CHMP2B-201ENST00000263780 FBXL7Q9UJT9 491 aa10.37□□□□□ -0.75
CHMP2B-201ENST00000263780 LAMTOR2Q9Y2Q5 125 aa10.37□□□□□ -0.75
CHMP2B-201ENST00000263780 TNRC6BQ9UPQ9 1833 aaKnown RBP10.37□□□□□ -0.75
CHMP2B-201ENST00000263780 UNC80Q8N2C7 3258 aa10.37□□□□□ -0.75
CHMP2B-201ENST00000263780 TRGV10A0A0A0MS01 117 aa10.36□□□□□ -0.75
CHMP2B-201ENST00000263780 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa10.36□□□□□ -0.75
CHMP2B-201ENST00000263780 FAM90A9PA6NNJ1 464 aa10.36□□□□□ -0.75
CHMP2B-201ENST00000263780 RHBDL1O75783 438 aa10.36□□□□□ -0.75
CHMP2B-201ENST00000263780 TFPI2P48307 235 aa10.36□□□□□ -0.75
CHMP2B-201ENST00000263780 PTTG1IPP53801 180 aa10.36□□□□□ -0.75
CHMP2B-201ENST00000263780 RPL30P62888 115 aaKnown RBP10.36□□□□□ -0.75
CHMP2B-201ENST00000263780 ZNF146Q15072 292 aa10.36□□□□□ -0.75
CHMP2B-201ENST00000263780 MMDQ15546 238 aa10.36□□□□□ -0.75
CHMP2B-201ENST00000263780 SLC23A3Q6PIS1 610 aa10.36□□□□□ -0.75
CHMP2B-201ENST00000263780 Q6ZN92 141 aa10.36□□□□□ -0.75
CHMP2B-201ENST00000263780 C19orf35Q6ZS72 473 aa10.36□□□□□ -0.75
CHMP2B-201ENST00000263780 MCEMP1Q8IX19 187 aa10.36□□□□□ -0.75
CHMP2B-201ENST00000263780 OR2D3Q8NGH3 330 aa10.36□□□□□ -0.75
CHMP2B-201ENST00000263780 HSD17B10Q99714 261 aaKnown RBP10.36□□□□□ -0.75
CHMP2B-201ENST00000263780 SFXN3Q9BWM7 321 aa10.36□□□□□ -0.75
CHMP2B-201ENST00000263780 NRN1Q9NPD7 142 aa10.36□□□□□ -0.75
CHMP2B-201ENST00000263780 TBL2Q9Y4P3 447 aaKnown RBP10.36□□□□□ -0.75
CHMP2B-201ENST00000263780 CDIPTO14735 213 aa10.36□□□□□ -0.75
CHMP2B-201ENST00000263780 IGLC2P0DOY2 106 aa10.36□□□□□ -0.75
CHMP2B-201ENST00000263780 IGLC3P0DOY3 106 aa10.36□□□□□ -0.75
CHMP2B-201ENST00000263780 CA6P23280 308 aa10.36□□□□□ -0.75
CHMP2B-201ENST00000263780 LTBRP36941 435 aa10.36□□□□□ -0.75
CHMP2B-201ENST00000263780 KRTCAP3Q53RY4 240 aa10.36□□□□□ -0.75
CHMP2B-201ENST00000263780 GCSAMLQ5JQS6 135 aa10.36□□□□□ -0.75
CHMP2B-201ENST00000263780 SAPCD1Q5SSQ6 148 aa10.36□□□□□ -0.75
CHMP2B-201ENST00000263780 ZNF808Q8N4W9 903 aaPredicted RBP10.36□□□□□ -0.75
CHMP2B-201ENST00000263780 KCNS1Q96KK3 526 aa10.36□□□□□ -0.75
CHMP2B-201ENST00000263780 FAM103A1Q9BTL3 118 aaKnown RBP10.36□□□□□ -0.75
CHMP2B-201ENST00000263780 GNB4Q9HAV0 340 aa10.36□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 39.2 ms