RNA–Protein interactions for RNA: ENST00000263351.9

ZNF541-201, Transcript of zinc finger protein 541, humanhuman

TSL 1 (best)

Gene ZNF541, Length 2,573 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF541-201ENST00000263351 ASPHD1Q5U4P2 390 aa13.8□□□□□ -0.2
ZNF541-201ENST00000263351 REC114Q7Z4M0 266 aa13.8□□□□□ -0.2
ZNF541-201ENST00000263351 ZNF645Q8N7E2 425 aa13.8□□□□□ -0.2
ZNF541-201ENST00000263351 LEAP2Q969E1 77 aa13.8□□□□□ -0.2
ZNF541-201ENST00000263351 TRBV20OR9-2A0A075B6H5 130 aa13.8□□□□□ -0.2
ZNF541-201ENST00000263351 CTXND1A0A1B0GTU2 59 aa13.8□□□□□ -0.2
ZNF541-201ENST00000263351 NPIPB11E5RHQ5 1161 aa13.8□□□□□ -0.2
ZNF541-201ENST00000263351 PROP1O75360 226 aa13.8□□□□□ -0.2
ZNF541-201ENST00000263351 NDUFB4O95168 129 aa13.8□□□□□ -0.2
ZNF541-201ENST00000263351 CER1O95813 267 aa13.8□□□□□ -0.2
ZNF541-201ENST00000263351 IFNA1P01562 189 aa13.8□□□□□ -0.2
ZNF541-201ENST00000263351 P0C879 139 aa13.8□□□□□ -0.2
ZNF541-201ENST00000263351 THBS3P49746 956 aa13.8□□□□□ -0.2
ZNF541-201ENST00000263351 FBXW9Q5XUX1 488 aa13.8□□□□□ -0.2
ZNF541-201ENST00000263351 LINC00596Q86U02 117 aa13.8□□□□□ -0.2
ZNF541-201ENST00000263351 PTPRBP23467 1997 aa13.8□□□□□ -0.2
ZNF541-201ENST00000263351 B4E171 279 aa13.79□□□□□ -0.2
ZNF541-201ENST00000263351 SH2D1BO14796 132 aa13.79□□□□□ -0.2
ZNF541-201ENST00000263351 RBFOX2O43251 390 aaKnown RBP eCLIP13.79□□□□□ -0.2
ZNF541-201ENST00000263351 IGHEP01854 428 aa13.79□□□□□ -0.2
ZNF541-201ENST00000263351 TSPAN7P41732 249 aa13.79□□□□□ -0.2
ZNF541-201ENST00000263351 JOSD1Q15040 202 aaPredicted RBP13.79□□□□□ -0.2
ZNF541-201ENST00000263351 C11orf53Q8IXP5 236 aa13.79□□□□□ -0.2
ZNF541-201ENST00000263351 OR10P1Q8NGE3 313 aa13.79□□□□□ -0.2
ZNF541-201ENST00000263351 PINX1Q96BK5 328 aaKnown RBP13.79□□□□□ -0.2
ZNF541-201ENST00000263351 GALMQ96C23 342 aa13.79□□□□□ -0.2
ZNF541-201ENST00000263351 TACC2O95359 2948 aa13.79□□□□□ -0.2
ZNF541-201ENST00000263351 GRIFINA4D1Z8 144 aa13.79□□□□□ -0.2
ZNF541-201ENST00000263351 TSTD3H0UI37 97 aa13.79□□□□□ -0.2
ZNF541-201ENST00000263351 MYOD1P15172 320 aa13.79□□□□□ -0.2
ZNF541-201ENST00000263351 IGHV1-2P23083 117 aa13.79□□□□□ -0.2
ZNF541-201ENST00000263351 FABP6P51161 128 aa13.79□□□□□ -0.2
ZNF541-201ENST00000263351 SRSF6Q13247 344 aaKnown RBP13.79□□□□□ -0.2
ZNF541-201ENST00000263351 USF2Q15853 346 aaPredicted RBP13.79□□□□□ -0.2
ZNF541-201ENST00000263351 Q8TCH9 128 aa13.79□□□□□ -0.2
ZNF541-201ENST00000263351 TMEM147Q9BVK8 224 aa13.79□□□□□ -0.2
ZNF541-201ENST00000263351 LAMTOR5O43504 91 aa13.78□□□□□ -0.2
ZNF541-201ENST00000263351 HRASP01112 189 aa13.78□□□□□ -0.2
ZNF541-201ENST00000263351 IL3RAP26951 378 aa13.78□□□□□ -0.2
ZNF541-201ENST00000263351 CD82P27701 267 aa13.78□□□□□ -0.2
ZNF541-201ENST00000263351 ZNF146Q15072 292 aa13.78□□□□□ -0.2
ZNF541-201ENST00000263351 SPRNQ5BIV9 151 aa13.78□□□□□ -0.2
ZNF541-201ENST00000263351 OR5B12Q96R08 314 aa13.78□□□□□ -0.2
ZNF541-201ENST00000263351 IMMP2LQ96T52 175 aa13.78□□□□□ -0.2
ZNF541-201ENST00000263351 PYGO2Q9BRQ0 406 aa13.78□□□□□ -0.2
ZNF541-201ENST00000263351 WIPI2Q9Y4P8 454 aa13.78□□□□□ -0.2
ZNF541-201ENST00000263351 PLCE1Q9P212 2302 aa13.78□□□□□ -0.2
ZNF541-201ENST00000263351 C15orf62A8K5M9 175 aa13.78□□□□□ -0.2
ZNF541-201ENST00000263351 RRHO14718 337 aa13.78□□□□□ -0.2
ZNF541-201ENST00000263351 EIF4EBP1Q13541 118 aaPredicted RBP13.78□□□□□ -0.2
ZNF541-201ENST00000263351 TBC1D28Q2M2D7 210 aa13.78□□□□□ -0.2
ZNF541-201ENST00000263351 ZNF766Q5HY98 468 aa13.78□□□□□ -0.2
ZNF541-201ENST00000263351 KLF14Q8TD94 323 aaPredicted RBP13.78□□□□□ -0.2
ZNF541-201ENST00000263351 STRADBQ9C0K7 418 aa13.78□□□□□ -0.2
ZNF541-201ENST00000263351 CTDSP1Q9GZU7 261 aa13.78□□□□□ -0.2
ZNF541-201ENST00000263351 GVINP1Q7Z2Y8 2422 aa13.78□□□□□ -0.2
ZNF541-201ENST00000263351 RAC2P15153 192 aa13.78□□□□□ -0.2
ZNF541-201ENST00000263351 C1orf229Q6ZS94 237 aaPredicted RBP13.78□□□□□ -0.2
ZNF541-201ENST00000263351 H2BFWTQ7Z2G1 175 aa13.78□□□□□ -0.2
ZNF541-201ENST00000263351 SSMEM1Q8WWF3 244 aa13.78□□□□□ -0.2
ZNF541-201ENST00000263351 FAM122AQ96E09 287 aa13.78□□□□□ -0.2
ZNF541-201ENST00000263351 SPRY4Q9C004 299 aa13.78□□□□□ -0.2
ZNF541-201ENST00000263351 MARCH11A6NNE9 402 aa13.77□□□□□ -0.21
ZNF541-201ENST00000263351 A8MWP6 167 aa13.77□□□□□ -0.21
ZNF541-201ENST00000263351 SP1P08047 785 aa13.77□□□□□ -0.21
ZNF541-201ENST00000263351 RPL39P5Q59GN2 51 aa13.77□□□□□ -0.21
ZNF541-201ENST00000263351 SPATA31B1PQ5VZV4 182 aa13.77□□□□□ -0.21
ZNF541-201ENST00000263351 TEX38Q6PEX7 206 aa13.77□□□□□ -0.21
ZNF541-201ENST00000263351 OR2T10Q8NGZ9 312 aa13.77□□□□□ -0.21
ZNF541-201ENST00000263351 ARRDC1-AS1Q9H2J1 176 aa13.77□□□□□ -0.21
ZNF541-201ENST00000263351 CTNNBIP1Q9NSA3 81 aaPredicted RBP13.77□□□□□ -0.21
ZNF541-201ENST00000263351 AQP7O14520 342 aa13.77□□□□□ -0.21
ZNF541-201ENST00000263351 FCGR3BO75015 233 aa13.77□□□□□ -0.21
ZNF541-201ENST00000263351 GCH1P30793 250 aa13.77□□□□□ -0.21
ZNF541-201ENST00000263351 CDC34P49427 236 aaPredicted RBP13.77□□□□□ -0.21
ZNF541-201ENST00000263351 LINC01551Q86U37 167 aa13.77□□□□□ -0.21
ZNF541-201ENST00000263351 TGIF2LXQ8IUE1 241 aa13.77□□□□□ -0.21
ZNF541-201ENST00000263351 MRPL41Q8IXM3 137 aaKnown RBP13.77□□□□□ -0.21
ZNF541-201ENST00000263351 ABHD12Q8N2K0 398 aa13.77□□□□□ -0.21
ZNF541-201ENST00000263351 AGMATQ9BSE5 352 aa13.77□□□□□ -0.21
ZNF541-201ENST00000263351 KCNIP1Q9NZI2 227 aa13.77□□□□□ -0.21
ZNF541-201ENST00000263351 IGHV3OR15-7A0A075B7D8 119 aa13.76□□□□□ -0.21
ZNF541-201ENST00000263351 ZNF320A2RRD8 509 aa13.76□□□□□ -0.21
ZNF541-201ENST00000263351 FOXF2Q12947 444 aa13.76□□□□□ -0.21
ZNF541-201ENST00000263351 ACTL10Q5JWF8 245 aa13.76□□□□□ -0.21
ZNF541-201ENST00000263351 MIC13Q5XKP0 118 aa13.76□□□□□ -0.21
ZNF541-201ENST00000263351 CNEP1R1Q8N9A8 125 aa13.76□□□□□ -0.21
ZNF541-201ENST00000263351 NEIL1Q96FI4 390 aaPredicted RBP13.76□□□□□ -0.21
ZNF541-201ENST00000263351 ACTR3CQ9C0K3 210 aaPredicted RBP13.76□□□□□ -0.21
ZNF541-201ENST00000263351 CBLN4Q9NTU7 201 aa13.76□□□□□ -0.21
ZNF541-201ENST00000263351 TMEM30CPA0ZSE6 113 aa13.76□□□□□ -0.21
ZNF541-201ENST00000263351 COX5AP20674 150 aa13.76□□□□□ -0.21
ZNF541-201ENST00000263351 SLC10A1Q14973 349 aa13.76□□□□□ -0.21
ZNF541-201ENST00000263351 MOB1BQ7L9L4 216 aa13.76□□□□□ -0.21
ZNF541-201ENST00000263351 TMEM170AQ8WVE7 144 aa13.76□□□□□ -0.21
ZNF541-201ENST00000263351 CDX2Q99626 313 aaPredicted RBP13.76□□□□□ -0.21
ZNF541-201ENST00000263351 POLDIP2Q9Y2S7 368 aa13.76□□□□□ -0.21
ZNF541-201ENST00000263351 HOXA6P31267 233 aa13.75□□□□□ -0.21
ZNF541-201ENST00000263351 TDRG1Q3Y452 100 aa13.75□□□□□ -0.21
ZNF541-201ENST00000263351 OR6C3Q9NZP0 311 aa13.75□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 36.8 ms