RNA–Protein interactions for RNA: ENST00000261866.11

SPG11-201, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SPG11, Length 7,774 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-201ENST00000261866 TCTEX1D1Q8N7M0 179 aa10.4□□□□□ -0.74
SPG11-201ENST00000261866 OR52M1Q8NGK5 317 aa10.4□□□□□ -0.74
SPG11-201ENST00000261866 MARVELD1Q9BSK0 173 aa10.4□□□□□ -0.74
SPG11-201ENST00000261866 ZG16O60844 167 aa10.4□□□□□ -0.75
SPG11-201ENST00000261866 ZNF273Q14593 569 aa10.4□□□□□ -0.75
SPG11-201ENST00000261866 NUDT16L1Q9BRJ7 211 aaKnown RBP10.4□□□□□ -0.75
SPG11-201ENST00000261866 C11orf68Q9H3H3 251 aaKnown RBP10.4□□□□□ -0.75
SPG11-201ENST00000261866 FAM206AQ9NX38 181 aa10.4□□□□□ -0.75
SPG11-201ENST00000261866 TAF1LQ8IZX4 1826 aa10.4□□□□□ -0.75
SPG11-201ENST00000261866 TMEM189A5PLL7 270 aa10.4□□□□□ -0.75
SPG11-201ENST00000261866 KLF4O43474 513 aa10.4□□□□□ -0.75
SPG11-201ENST00000261866 FAM216BQ8N7L0 139 aa10.4□□□□□ -0.75
SPG11-201ENST00000261866 ZNF837Q96EG3 531 aaPredicted RBP10.4□□□□□ -0.75
SPG11-201ENST00000261866 ZNF815PA8K554 130 aa10.39□□□□□ -0.75
SPG11-201ENST00000261866 CECR9P0C854 216 aa10.39□□□□□ -0.75
SPG11-201ENST00000261866 CBLN2Q8IUK8 224 aa10.39□□□□□ -0.75
SPG11-201ENST00000261866 CTDSPLO15194 276 aa10.39□□□□□ -0.75
SPG11-201ENST00000261866 C9orf106Q8NAJ2 232 aa10.39□□□□□ -0.75
SPG11-201ENST00000261866 PGPEP1Q9NXJ5 209 aa10.39□□□□□ -0.75
SPG11-201ENST00000261866 IGKV1D-43A0A0B4J1Z2 117 aa10.39□□□□□ -0.75
SPG11-201ENST00000261866 IGHV3-11P01762 117 aa10.39□□□□□ -0.75
SPG11-201ENST00000261866 C7orf69Q9H7B7 122 aa10.39□□□□□ -0.75
SPG11-201ENST00000261866 LIPFP07098 398 aa10.39□□□□□ -0.75
SPG11-201ENST00000261866 ACAA1P09110 424 aaPredicted RBP10.39□□□□□ -0.75
SPG11-201ENST00000261866 OR5AU1Q8NGC0 362 aa10.39□□□□□ -0.75
SPG11-201ENST00000261866 DEFB104AQ8WTQ1 72 aa10.39□□□□□ -0.75
SPG11-201ENST00000261866 TP53RKQ96S44 253 aa10.39□□□□□ -0.75
SPG11-201ENST00000261866 CLEC7AQ9BXN2 247 aa10.39□□□□□ -0.75
SPG11-201ENST00000261866 PDCD11Q14690 1871 aaKnown RBP10.39□□□□□ -0.75
SPG11-201ENST00000261866 EGR4Q05215 589 aa10.39□□□□□ -0.75
SPG11-201ENST00000261866 ELOBQ15370 118 aa10.39□□□□□ -0.75
SPG11-201ENST00000261866 ZNF56Q15929 161 aa10.39□□□□□ -0.75
SPG11-201ENST00000261866 ITLN2Q8WWU7 325 aaPredicted RBP10.39□□□□□ -0.75
SPG11-201ENST00000261866 WFDC12Q8WWY7 111 aa10.39□□□□□ -0.75
SPG11-201ENST00000261866 MARS2Q96GW9 593 aaKnown RBP10.39□□□□□ -0.75
SPG11-201ENST00000261866 PARP14Q460N5 1801 aa10.39□□□□□ -0.75
SPG11-201ENST00000261866 ISG15P05161 165 aa10.39□□□□□ -0.75
SPG11-201ENST00000261866 APCDD1LQ8NCL9 501 aa10.39□□□□□ -0.75
SPG11-201ENST00000261866 IGKV1D-33P01593 117 aa10.38□□□□□ -0.75
SPG11-201ENST00000261866 IGKV1-33P01594 117 aa10.38□□□□□ -0.75
SPG11-201ENST00000261866 TRGV3P03979 118 aa10.38□□□□□ -0.75
SPG11-201ENST00000261866 SMIM10L1P0DMW3 83 aa10.38□□□□□ -0.75
SPG11-201ENST00000261866 SURF2Q15527 256 aaPredicted RBP10.38□□□□□ -0.75
SPG11-201ENST00000261866 OR4A47Q6IF82 309 aa10.38□□□□□ -0.75
SPG11-201ENST00000261866 CLRN3Q8NCR9 226 aa10.38□□□□□ -0.75
SPG11-201ENST00000261866 OR2T10Q8NGZ9 312 aa10.38□□□□□ -0.75
SPG11-201ENST00000261866 SMIM10Q96HG1 83 aa10.38□□□□□ -0.75
SPG11-201ENST00000261866 PLXNA1Q9UIW2 1896 aa10.38□□□□□ -0.75
SPG11-201ENST00000261866 PGPA6NDG6 321 aa10.38□□□□□ -0.75
SPG11-201ENST00000261866 IFITM10A6NMD0 228 aa10.38□□□□□ -0.75
SPG11-201ENST00000261866 SPACA3Q8IXA5 215 aa10.38□□□□□ -0.75
SPG11-201ENST00000261866 VAX2Q9UIW0 290 aa10.38□□□□□ -0.75
SPG11-201ENST00000261866 B9A039 149 aa10.38□□□□□ -0.75
SPG11-201ENST00000261866 C1QL1O75973 258 aa10.38□□□□□ -0.75
SPG11-201ENST00000261866 SRSF6Q13247 344 aaKnown RBP10.38□□□□□ -0.75
SPG11-201ENST00000261866 ZNF79Q15937 498 aa10.38□□□□□ -0.75
SPG11-201ENST00000261866 FGFRL1Q8N441 504 aa10.38□□□□□ -0.75
SPG11-201ENST00000261866 NUDT10Q8NFP7 164 aa10.38□□□□□ -0.75
SPG11-201ENST00000261866 NUDT11Q96G61 164 aa10.38□□□□□ -0.75
SPG11-201ENST00000261866 RHOVQ96L33 236 aa10.38□□□□□ -0.75
SPG11-201ENST00000261866 QTRT1Q9BXR0 403 aaKnown RBP10.38□□□□□ -0.75
SPG11-201ENST00000261866 AMY1AP04745 511 aa10.38□□□□□ -0.75
SPG11-201ENST00000261866 MAS1LP35410 378 aa10.38□□□□□ -0.75
SPG11-201ENST00000261866 WFIKKN1Q96NZ8 548 aa10.38□□□□□ -0.75
SPG11-201ENST00000261866 TMEM106BQ9NUM4 274 aa10.38□□□□□ -0.75
SPG11-201ENST00000261866 IGHV1-2P23083 117 aa10.38□□□□□ -0.75
SPG11-201ENST00000261866 RELBQ01201 579 aa10.38□□□□□ -0.75
SPG11-201ENST00000261866 NSUN5P1Q3KNT7 163 aa10.38□□□□□ -0.75
SPG11-201ENST00000261866 FAM106AQ4KMX7 169 aa10.38□□□□□ -0.75
SPG11-201ENST00000261866 TMEM56-RWDD3S4R434 201 aa10.38□□□□□ -0.75
SPG11-201ENST00000261866 CA2P00918 260 aa10.38□□□□□ -0.75
SPG11-201ENST00000261866 GPR146Q96CH1 333 aa10.38□□□□□ -0.75
SPG11-201ENST00000261866 ELOVL5Q9NYP7 299 aa10.38□□□□□ -0.75
SPG11-201ENST00000261866 UMODP07911 640 aa10.37□□□□□ -0.75
SPG11-201ENST00000261866 DLX6P56179 175 aa10.37□□□□□ -0.75
SPG11-201ENST00000261866 ZBTB34Q8NCN2 500 aa10.37□□□□□ -0.75
SPG11-201ENST00000261866 MRPL30Q8TCC3 161 aaKnown RBP10.37□□□□□ -0.75
SPG11-201ENST00000261866 ZNF256Q9Y2P7 627 aaPredicted RBP10.37□□□□□ -0.75
SPG11-201ENST00000261866 PLA2G10O15496 165 aa10.37□□□□□ -0.75
SPG11-201ENST00000261866 MC5RP33032 325 aa10.37□□□□□ -0.75
SPG11-201ENST00000261866 UQCC3Q6UW78 93 aa10.37□□□□□ -0.75
SPG11-201ENST00000261866 ZNF818PQ6ZRF7 136 aa10.37□□□□□ -0.75
SPG11-201ENST00000261866 Q6ZT83 130 aa10.37□□□□□ -0.75
SPG11-201ENST00000261866 PHLDA3Q9Y5J5 127 aa10.37□□□□□ -0.75
SPG11-201ENST00000261866 CD74P04233 296 aa10.37□□□□□ -0.75
SPG11-201ENST00000261866 DSPPQ9NZW4 1301 aa10.37□□□□□ -0.75
SPG11-201ENST00000261866 C11orf91Q3C1V1 193 aa10.37□□□□□ -0.75
SPG11-201ENST00000261866 TMEM54Q969K7 222 aa10.37□□□□□ -0.75
SPG11-201ENST00000261866 FBXL15Q9H469 300 aa10.37□□□□□ -0.75
SPG11-201ENST00000261866 NPVFQ9HCQ7 196 aa10.37□□□□□ -0.75
SPG11-201ENST00000261866 ZFC3H1O60293 1989 aaKnown RBP10.37□□□□□ -0.75
SPG11-201ENST00000261866 NDUFB4O95168 129 aa10.37□□□□□ -0.75
SPG11-201ENST00000261866 IRF3Q14653 427 aa10.37□□□□□ -0.75
SPG11-201ENST00000261866 SGMS2Q8NHU3 365 aa10.37□□□□□ -0.75
SPG11-201ENST00000261866 FAM57AQ8TBR7 257 aa10.37□□□□□ -0.75
SPG11-201ENST00000261866 SCMH1Q96GD3 660 aa10.37□□□□□ -0.75
SPG11-201ENST00000261866 HEATR5BQ9P2D3 2071 aa10.37□□□□□ -0.75
SPG11-201ENST00000261866 C7orf71A4D174 169 aa10.37□□□□□ -0.75
SPG11-201ENST00000261866 TCF21O43680 179 aa10.37□□□□□ -0.75
SPG11-201ENST00000261866 ATOH7Q8N100 152 aa10.37□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 36.1 ms