RNA–Protein interactions for RNA: ENST00000260054.8

CCDC90B-201, Transcript of coiled-coil domain containing 90B, humanhuman

TSL 2

Gene CCDC90B, Length 1,688 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC90B-201ENST00000260054 PPP1R1AQ13522 171 aa12.69□□□□□ -0.38
CCDC90B-201ENST00000260054 SP6Q3SY56 376 aa12.69□□□□□ -0.38
CCDC90B-201ENST00000260054 SSX3Q99909 188 aa12.69□□□□□ -0.38
CCDC90B-201ENST00000260054 PRELID3BQ9Y3B1 194 aa12.69□□□□□ -0.38
CCDC90B-201ENST00000260054 TEP1Q99973 2627 aaKnown RBP12.69□□□□□ -0.38
CCDC90B-201ENST00000260054 H7C2Y5 167 aa12.68□□□□□ -0.38
CCDC90B-201ENST00000260054 PEX14O75381 377 aa12.68□□□□□ -0.38
CCDC90B-201ENST00000260054 IGKV1D-33P01593 117 aa12.68□□□□□ -0.38
CCDC90B-201ENST00000260054 IGKV1-33P01594 117 aa12.68□□□□□ -0.38
CCDC90B-201ENST00000260054 APOA2P02652 100 aa12.68□□□□□ -0.38
CCDC90B-201ENST00000260054 SNRNP70P08621 437 aaKnown RBP12.68□□□□□ -0.38
CCDC90B-201ENST00000260054 OR5AC1P0C628 307 aa12.68□□□□□ -0.38
CCDC90B-201ENST00000260054 BRS3P32247 399 aa12.68□□□□□ -0.38
CCDC90B-201ENST00000260054 MC5RP33032 325 aa12.68□□□□□ -0.38
CCDC90B-201ENST00000260054 DYNLT3P51808 116 aa12.68□□□□□ -0.38
CCDC90B-201ENST00000260054 TAS2R31P59538 309 aa12.68□□□□□ -0.38
CCDC90B-201ENST00000260054 LRRC75BQ2VPJ9 315 aa12.68□□□□□ -0.38
CCDC90B-201ENST00000260054 Q6YL49 198 aa12.68□□□□□ -0.38
CCDC90B-201ENST00000260054 SGPP2Q8IWX5 399 aa12.68□□□□□ -0.38
CCDC90B-201ENST00000260054 SPAG16Q8N0X2 631 aa12.68□□□□□ -0.38
CCDC90B-201ENST00000260054 SIGLECL1Q8N7X8 197 aa12.68□□□□□ -0.38
CCDC90B-201ENST00000260054 ALX4Q9H161 411 aaPredicted RBP12.68□□□□□ -0.38
CCDC90B-201ENST00000260054 LIN7CQ9NUP9 197 aaKnown RBP12.68□□□□□ -0.38
CCDC90B-201ENST00000260054 WASHC3Q9Y3C0 194 aa12.68□□□□□ -0.38
CCDC90B-201ENST00000260054 INMT-MINDY4F8WBC2 141 aa12.67□□□□□ -0.38
CCDC90B-201ENST00000260054 H0Y980 276 aa12.67□□□□□ -0.38
CCDC90B-201ENST00000260054 H3BUX3 64 aa12.67□□□□□ -0.38
CCDC90B-201ENST00000260054 CRLF1O75462 422 aa12.67□□□□□ -0.38
CCDC90B-201ENST00000260054 OR4E1P0C645 316 aa12.67□□□□□ -0.38
CCDC90B-201ENST00000260054 TAGLNQ01995 201 aaKnown RBP12.67□□□□□ -0.38
CCDC90B-201ENST00000260054 AANATQ16613 207 aa12.67□□□□□ -0.38
CCDC90B-201ENST00000260054 ZNF585BQ52M93 769 aa12.67□□□□□ -0.38
CCDC90B-201ENST00000260054 PDPNQ86YL7 162 aa12.67□□□□□ -0.38
CCDC90B-201ENST00000260054 ZDHHC16Q969W1 377 aa12.67□□□□□ -0.38
CCDC90B-201ENST00000260054 CRYZL1O95825 349 aa12.67□□□□□ -0.38
CCDC90B-201ENST00000260054 IGHV4-59P01825 116 aa12.67□□□□□ -0.38
CCDC90B-201ENST00000260054 VAMP1P23763 118 aa12.67□□□□□ -0.38
CCDC90B-201ENST00000260054 IER3P46695 156 aa12.67□□□□□ -0.38
CCDC90B-201ENST00000260054 UBE2MP61081 183 aaKnown RBP12.67□□□□□ -0.38
CCDC90B-201ENST00000260054 EBI3Q14213 229 aa12.67□□□□□ -0.38
CCDC90B-201ENST00000260054 SLC9A3R2Q15599 337 aa12.67□□□□□ -0.38
CCDC90B-201ENST00000260054 RTL8BQ17RB0 113 aa12.67□□□□□ -0.38
CCDC90B-201ENST00000260054 GLYATL2Q8WU03 294 aa12.67□□□□□ -0.38
CCDC90B-201ENST00000260054 GALNT14Q96FL9 552 aa12.67□□□□□ -0.38
CCDC90B-201ENST00000260054 RITA1Q96K30 269 aa12.67□□□□□ -0.38
CCDC90B-201ENST00000260054 PRR13Q9NZ81 148 aa12.67□□□□□ -0.38
CCDC90B-201ENST00000260054 C9orf170A2RU37 121 aa12.66□□□□□ -0.38
CCDC90B-201ENST00000260054 RBFOX2O43251 390 aaKnown RBP eCLIP12.66□□□□□ -0.38
CCDC90B-201ENST00000260054 SFT2D2O95562 160 aa12.66□□□□□ -0.38
CCDC90B-201ENST00000260054 HLA-AP01891 365 aaKnown RBP12.66□□□□□ -0.38
CCDC90B-201ENST00000260054 RRASP10301 218 aa12.66□□□□□ -0.38
CCDC90B-201ENST00000260054 KIR2DS2P43631 304 aa12.66□□□□□ -0.38
CCDC90B-201ENST00000260054 NKX2-5P52952 324 aaPredicted RBP12.66□□□□□ -0.38
CCDC90B-201ENST00000260054 RAG2P55895 527 aa12.66□□□□□ -0.38
CCDC90B-201ENST00000260054 SCGB2A2Q13296 93 aa12.66□□□□□ -0.38
CCDC90B-201ENST00000260054 HES1Q14469 280 aa12.66□□□□□ -0.38
CCDC90B-201ENST00000260054 HNF4GQ14541 408 aa12.66□□□□□ -0.38
CCDC90B-201ENST00000260054 C4orf46Q504U0 113 aa12.66□□□□□ -0.38
CCDC90B-201ENST00000260054 THNSL2Q86YJ6 484 aa12.66□□□□□ -0.38
CCDC90B-201ENST00000260054 TCTEX1D1Q8N7M0 179 aa12.66□□□□□ -0.38
CCDC90B-201ENST00000260054 OR52B4Q8NGK2 314 aa12.66□□□□□ -0.38
CCDC90B-201ENST00000260054 OR4S2Q8NH73 311 aa12.66□□□□□ -0.38
CCDC90B-201ENST00000260054 EAF1Q96JC9 268 aaPredicted RBP12.66□□□□□ -0.38
CCDC90B-201ENST00000260054 SEC22CQ9BRL7 303 aa12.66□□□□□ -0.38
CCDC90B-201ENST00000260054 KCNIP3Q9Y2W7 256 aa12.66□□□□□ -0.38
CCDC90B-201ENST00000260054 ANKRD34BA5PLL1 514 aa12.65□□□□□ -0.38
CCDC90B-201ENST00000260054 HMX3A6NHT5 357 aa12.65□□□□□ -0.38
CCDC90B-201ENST00000260054 HOXA3O43365 443 aaPredicted RBP12.65□□□□□ -0.38
CCDC90B-201ENST00000260054 S1PR2O95136 353 aa12.65□□□□□ -0.38
CCDC90B-201ENST00000260054 MOSP00540 346 aa12.65□□□□□ -0.38
CCDC90B-201ENST00000260054 FAM157CP0CG43 387 aa12.65□□□□□ -0.38
CCDC90B-201ENST00000260054 FAM106CPP0CH98 169 aa12.65□□□□□ -0.38
CCDC90B-201ENST00000260054 UCP1P25874 307 aa12.65□□□□□ -0.38
CCDC90B-201ENST00000260054 LPAR6P43657 344 aa12.65□□□□□ -0.38
CCDC90B-201ENST00000260054 DHRS2Q13268 280 aa12.65□□□□□ -0.38
CCDC90B-201ENST00000260054 TMEM187Q14656 261 aa12.65□□□□□ -0.38
CCDC90B-201ENST00000260054 TMEM177Q53S58 311 aa12.65□□□□□ -0.38
CCDC90B-201ENST00000260054 DHRS7BQ6IAN0 325 aaPredicted RBP12.65□□□□□ -0.38
CCDC90B-201ENST00000260054 OR4C13Q8NGP0 309 aa12.65□□□□□ -0.38
CCDC90B-201ENST00000260054 OR2T10Q8NGZ9 312 aa12.65□□□□□ -0.38
CCDC90B-201ENST00000260054 CD300LFQ8TDQ1 290 aa12.65□□□□□ -0.38
CCDC90B-201ENST00000260054 FLYWCH2Q96CP2 140 aaKnown RBP12.65□□□□□ -0.38
CCDC90B-201ENST00000260054 TMEM222Q9H0R3 208 aa12.65□□□□□ -0.38
CCDC90B-201ENST00000260054 FAM212BQ9NTI7 297 aaPredicted RBP12.65□□□□□ -0.38
CCDC90B-201ENST00000260054 TCF19Q9Y242 345 aa12.65□□□□□ -0.38
CCDC90B-201ENST00000260054 CUBNO60494 3623 aa12.64□□□□□ -0.39
CCDC90B-201ENST00000260054 B3GALNT1O75752 331 aa12.64□□□□□ -0.39
CCDC90B-201ENST00000260054 IFNA2P01563 188 aa12.64□□□□□ -0.39
CCDC90B-201ENST00000260054 IGKV1-39P01597 117 aa12.64□□□□□ -0.39
CCDC90B-201ENST00000260054 IGKV1D-39P04432 117 aa12.64□□□□□ -0.39
CCDC90B-201ENST00000260054 SERPINE2P07093 398 aa12.64□□□□□ -0.39
CCDC90B-201ENST00000260054 LY6EQ16553 131 aa12.64□□□□□ -0.39
CCDC90B-201ENST00000260054 ZFP69Q49AA0 526 aa12.64□□□□□ -0.39
CCDC90B-201ENST00000260054 LYG2Q86SG7 212 aa12.64□□□□□ -0.39
CCDC90B-201ENST00000260054 Q8N6K4 173 aa12.64□□□□□ -0.39
CCDC90B-201ENST00000260054 LHFPL5Q8TAF8 219 aa12.64□□□□□ -0.39
CCDC90B-201ENST00000260054 CASTOR1Q8WTX7 329 aa12.64□□□□□ -0.39
CCDC90B-201ENST00000260054 SSMEM1Q8WWF3 244 aa12.64□□□□□ -0.39
CCDC90B-201ENST00000260054 A0A0B4J293 547 aa12.64□□□□□ -0.39
CCDC90B-201ENST00000260054 SRRM4A7MD48 611 aaKnown RBP12.64□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 49.5 ms