RNA–Protein interactions for RNA: ENST00000258781.10

CCM2-201, Transcript of CCM2 scaffold protein, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CCM2, Length 1,894 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2-201ENST00000258781 THBS3P49746 956 aa22.73■■□□□ 1.23
CCM2-201ENST00000258781 DYNLT3P51808 116 aa22.73■■□□□ 1.23
CCM2-201ENST00000258781 UBE2KP61086 200 aa22.73■■□□□ 1.23
CCM2-201ENST00000258781 MRPS11P82912 194 aaKnown RBP22.73■■□□□ 1.23
CCM2-201ENST00000258781 CLINT1Q14677 625 aa22.73■■□□□ 1.23
CCM2-201ENST00000258781 ZNF251Q9BRH9 671 aa22.73■■□□□ 1.23
CCM2-201ENST00000258781 PSENENQ9NZ42 101 aa22.73■■□□□ 1.23
CCM2-201ENST00000258781 A0A1W2PPE3 182 aa22.73■■□□□ 1.23
CCM2-201ENST00000258781 ARHGDIBP52566 201 aa22.73■■□□□ 1.23
CCM2-201ENST00000258781 H1FXQ92522 213 aaKnown RBP22.73■■□□□ 1.23
CCM2-201ENST00000258781 CBLN4Q9NTU7 201 aa22.73■■□□□ 1.23
CCM2-201ENST00000258781 CRYBG3Q68DQ2 2970 aa22.72■■□□□ 1.23
CCM2-201ENST00000258781 TENM4Q6N022 2769 aa22.72■■□□□ 1.23
CCM2-201ENST00000258781 A6NNC1 897 aa22.72■■□□□ 1.23
CCM2-201ENST00000258781 IAPPP10997 89 aa22.72■■□□□ 1.23
CCM2-201ENST00000258781 ZP3P21754 424 aa22.72■■□□□ 1.23
CCM2-201ENST00000258781 BLOC1S1P78537 153 aa22.72■■□□□ 1.23
CCM2-201ENST00000258781 LYG1Q8N1E2 194 aa22.72■■□□□ 1.23
CCM2-201ENST00000258781 MARC2Q969Z3 335 aa22.72■■□□□ 1.23
CCM2-201ENST00000258781 RBKSQ9H477 322 aa22.72■■□□□ 1.23
CCM2-201ENST00000258781 PLA2G2EQ9NZK7 142 aa22.72■■□□□ 1.23
CCM2-201ENST00000258781 RAB19A4D1S5 217 aa22.71■■□□□ 1.23
CCM2-201ENST00000258781 GNG10P50151 68 aa22.71■■□□□ 1.23
CCM2-201ENST00000258781 C1orf229Q6ZS94 237 aaPredicted RBP22.71■■□□□ 1.23
CCM2-201ENST00000258781 KRBOX1C9JBD0 128 aa22.71■■□□□ 1.23
CCM2-201ENST00000258781 H3BP45 60 aa22.71■■□□□ 1.23
CCM2-201ENST00000258781 OR4S2Q8NH73 311 aa22.71■■□□□ 1.23
CCM2-201ENST00000258781 RAB39BQ96DA2 213 aa22.71■■□□□ 1.23
CCM2-201ENST00000258781 ATP5SQ99766 215 aa22.71■■□□□ 1.23
CCM2-201ENST00000258781 RAB1BQ9H0U4 201 aa22.71■■□□□ 1.23
CCM2-201ENST00000258781 SOD3P08294 240 aa22.7■■□□□ 1.22
CCM2-201ENST00000258781 COL8A2P25067 703 aa22.7■■□□□ 1.22
CCM2-201ENST00000258781 STPG2Q8N412 459 aa22.7■■□□□ 1.22
CCM2-201ENST00000258781 TMEM217Q8N7C4 229 aa22.7■■□□□ 1.22
CCM2-201ENST00000258781 PARP11Q9NR21 331 aa22.7■■□□□ 1.22
CCM2-201ENST00000258781 DFFBO76075 338 aa22.69■■□□□ 1.22
CCM2-201ENST00000258781 CCL3L1P16619 93 aa22.69■■□□□ 1.22
CCM2-201ENST00000258781 AARDQ4LEZ3 155 aa22.69■■□□□ 1.22
CCM2-201ENST00000258781 PXDC1Q5TGL8 231 aa22.69■■□□□ 1.22
CCM2-201ENST00000258781 C11orf71Q6IPW1 123 aa22.69■■□□□ 1.22
CCM2-201ENST00000258781 HSD17B11Q8NBQ5 300 aa22.69■■□□□ 1.22
CCM2-201ENST00000258781 MMP26Q9NRE1 261 aa22.69■■□□□ 1.22
CCM2-201ENST00000258781 AKAP6Q13023 2319 aa22.69■■□□□ 1.22
CCM2-201ENST00000258781 IGHV2-70P01814 119 aa22.68■■□□□ 1.22
CCM2-201ENST00000258781 DANCRP0C864 163 aa22.68■■□□□ 1.22
CCM2-201ENST00000258781 RAB5CP51148 216 aa22.68■■□□□ 1.22
CCM2-201ENST00000258781 ERVK-16P61578 105 aa22.68■■□□□ 1.22
CCM2-201ENST00000258781 TMEM267Q0VDI3 215 aaPredicted RBP22.68■■□□□ 1.22
CCM2-201ENST00000258781 UQCC3Q6UW78 93 aa22.68■■□□□ 1.22
CCM2-201ENST00000258781 CCDC28AQ8IWP9 274 aa22.68■■□□□ 1.22
CCM2-201ENST00000258781 TRBV23-1A0A0A0MS06 115 aa22.68■■□□□ 1.22
CCM2-201ENST00000258781 SHOXO15266 292 aa22.68■■□□□ 1.22
CCM2-201ENST00000258781 NQO2P16083 231 aa22.68■■□□□ 1.22
CCM2-201ENST00000258781 IL34Q6ZMJ4 242 aa22.68■■□□□ 1.22
CCM2-201ENST00000258781 TMEM155Q4W5P6 130 aa22.67■■□□□ 1.22
CCM2-201ENST00000258781 C8orf31Q8N9H6 132 aa22.67■■□□□ 1.22
CCM2-201ENST00000258781 LINC00052Q96N35 136 aa22.67■■□□□ 1.22
CCM2-201ENST00000258781 SH3BGRL3Q9H299 93 aa22.67■■□□□ 1.22
CCM2-201ENST00000258781 LYNX1G3V0Z9 82 aa22.66■■□□□ 1.22
CCM2-201ENST00000258781 LYNX1P0DP58 116 aa22.66■■□□□ 1.22
CCM2-201ENST00000258781 PLA2G2AP14555 144 aa22.66■■□□□ 1.22
CCM2-201ENST00000258781 DLX6P56179 175 aa22.66■■□□□ 1.22
CCM2-201ENST00000258781 CIB3Q96Q77 187 aaPredicted RBP22.66■■□□□ 1.22
CCM2-201ENST00000258781 HBG1P69891 147 aa22.66■■□□□ 1.22
CCM2-201ENST00000258781 HBG2P69892 147 aa22.66■■□□□ 1.22
CCM2-201ENST00000258781 ZNF383Q8NA42 475 aa22.66■■□□□ 1.22
CCM2-201ENST00000258781 GNPNAT1Q96EK6 184 aaPredicted RBP22.66■■□□□ 1.22
CCM2-201ENST00000258781 STRAPQ9Y3F4 350 aaKnown RBP22.66■■□□□ 1.22
CCM2-201ENST00000258781 OR9G9P0C7N8 305 aa22.65■■□□□ 1.22
CCM2-201ENST00000258781 ATP6V0CP27449 155 aa22.65■■□□□ 1.22
CCM2-201ENST00000258781 TMEM14EPQ6UXP3 125 aa22.65■■□□□ 1.22
CCM2-201ENST00000258781 UBTD1Q9HAC8 227 aa22.65■■□□□ 1.22
CCM2-201ENST00000258781 A1L4Q6 167 aa22.64■■□□□ 1.22
CCM2-201ENST00000258781 RBMXL2O75526 392 aaKnown RBP22.64■■□□□ 1.22
CCM2-201ENST00000258781 METTL15P1P0C7V9 234 aa22.64■■□□□ 1.22
CCM2-201ENST00000258781 SPANXN5Q5MJ07 72 aa22.64■■□□□ 1.22
CCM2-201ENST00000258781 BTNL8Q6UX41 500 aa22.64■■□□□ 1.22
CCM2-201ENST00000258781 Q6ZRG5 221 aa22.64■■□□□ 1.22
CCM2-201ENST00000258781 ZNF833PQ6ZTB9 187 aa22.64■■□□□ 1.22
CCM2-201ENST00000258781 DTX2Q86UW9 622 aa22.64■■□□□ 1.22
CCM2-201ENST00000258781 ZNF596Q8TC21 504 aa22.64■■□□□ 1.22
CCM2-201ENST00000258781 DTD1Q8TEA8 209 aa22.64■■□□□ 1.22
CCM2-201ENST00000258781 NEU4Q8WWR8 484 aaPredicted RBP22.64■■□□□ 1.22
CCM2-201ENST00000258781 TSNAXQ99598 290 aaKnown RBP22.64■■□□□ 1.22
CCM2-201ENST00000258781 SPOCK3Q9BQ16 436 aa22.64■■□□□ 1.22
CCM2-201ENST00000258781 CACFD1Q9UGQ2 172 aa22.64■■□□□ 1.22
CCM2-201ENST00000258781 LY86O95711 162 aa22.64■■□□□ 1.21
CCM2-201ENST00000258781 F2RL1P55085 397 aa22.64■■□□□ 1.21
CCM2-201ENST00000258781 PJVKQ0ZLH3 352 aa22.64■■□□□ 1.21
CCM2-201ENST00000258781 LINC00311Q8N616 119 aa22.64■■□□□ 1.21
CCM2-201ENST00000258781 USP9YO00507 2555 aaPredicted RBP22.64■■□□□ 1.21
CCM2-201ENST00000258781 TACC2O95359 2948 aa22.63■■□□□ 1.21
CCM2-201ENST00000258781 GPR37O15354 613 aa22.63■■□□□ 1.21
CCM2-201ENST00000258781 ERVFRD-1P60508 538 aa22.63■■□□□ 1.21
CCM2-201ENST00000258781 HAPLN4Q86UW8 402 aa22.63■■□□□ 1.21
CCM2-201ENST00000258781 LYPD6BQ8NI32 183 aa22.63■■□□□ 1.21
CCM2-201ENST00000258781 HRH4Q9H3N8 390 aa22.63■■□□□ 1.21
CCM2-201ENST00000258781 TRIM77I1YAP6 450 aa22.62■■□□□ 1.21
CCM2-201ENST00000258781 CRYZL1O95825 349 aa22.62■■□□□ 1.21
CCM2-201ENST00000258781 IFNA5P01569 189 aa22.62■■□□□ 1.21
Retrieved 100 of 20,778 RNA–protein pairs in 50.8 ms