RNA–Protein interactions for RNA: ENST00000252816.10

LSM4-201, Transcript of LSM4 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 2 BASIC

Gene LSM4, Length 986 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM4-201ENST00000252816 RAB9AP51151 201 aa17.87■□□□□ 0.45
LSM4-201ENST00000252816 PJVKQ0ZLH3 352 aa17.87■□□□□ 0.45
LSM4-201ENST00000252816 TMEM65Q6PI78 240 aa17.87■□□□□ 0.45
LSM4-201ENST00000252816 ZNF491Q8N8L2 437 aa17.87■□□□□ 0.45
LSM4-201ENST00000252816 CASTOR1Q8WTX7 329 aa17.87■□□□□ 0.45
LSM4-201ENST00000252816 SNAPC3Q92966 411 aa17.87■□□□□ 0.45
LSM4-201ENST00000252816 NECAP2Q9NVZ3 263 aa17.87■□□□□ 0.45
LSM4-201ENST00000252816 FOXA2Q9Y261 457 aaPredicted RBP17.87■□□□□ 0.45
LSM4-201ENST00000252816 RBMX2Q9Y388 322 aaKnown RBP17.87■□□□□ 0.45
LSM4-201ENST00000252816 CRYZL1O95825 349 aa17.86■□□□□ 0.45
LSM4-201ENST00000252816 ARPC4P59998 168 aa17.86■□□□□ 0.45
LSM4-201ENST00000252816 RPL30P62888 115 aaKnown RBP17.86■□□□□ 0.45
LSM4-201ENST00000252816 LFNGQ8NES3 379 aa17.86■□□□□ 0.45
LSM4-201ENST00000252816 ARPC1AQ92747 370 aa17.86■□□□□ 0.45
LSM4-201ENST00000252816 KCTD12Q96CX2 325 aaKnown RBP17.86■□□□□ 0.45
LSM4-201ENST00000252816 UBE2E2Q96LR5 201 aa17.86■□□□□ 0.45
LSM4-201ENST00000252816 DUS4LO95620 317 aaKnown RBP17.85■□□□□ 0.45
LSM4-201ENST00000252816 AADACP22760 399 aa17.85■□□□□ 0.45
LSM4-201ENST00000252816 TAS2R20P59543 309 aa17.85■□□□□ 0.45
LSM4-201ENST00000252816 TMEM267Q0VDI3 215 aaPredicted RBP17.85■□□□□ 0.45
LSM4-201ENST00000252816 CBX3Q13185 183 aa17.85■□□□□ 0.45
LSM4-201ENST00000252816 EIF4EBP1Q13541 118 aaPredicted RBP17.85■□□□□ 0.45
LSM4-201ENST00000252816 FXYD3Q14802 87 aa17.85■□□□□ 0.45
LSM4-201ENST00000252816 MRGPRG-AS1Q2M3A8 158 aa17.85■□□□□ 0.45
LSM4-201ENST00000252816 AKIRIN2Q53H80 203 aa17.85■□□□□ 0.45
LSM4-201ENST00000252816 TMEM69Q5SWH9 247 aa17.85■□□□□ 0.45
LSM4-201ENST00000252816 UNQ5815/PRO19632Q6UWF5 114 aa17.85■□□□□ 0.45
LSM4-201ENST00000252816 ANKRD13BQ86YJ7 626 aa17.85■□□□□ 0.45
LSM4-201ENST00000252816 TCTEX1D1Q8N7M0 179 aa17.85■□□□□ 0.45
LSM4-201ENST00000252816 AURKAIP1Q9NWT8 199 aaPredicted RBP17.85■□□□□ 0.45
LSM4-201ENST00000252816 VSIG4Q9Y279 399 aa17.85■□□□□ 0.45
LSM4-201ENST00000252816 SLC22A5O76082 557 aa17.84■□□□□ 0.45
LSM4-201ENST00000252816 EIF4EP06730 217 aaKnown RBP17.84■□□□□ 0.45
LSM4-201ENST00000252816 FCGR2CP31995 323 aa17.84■□□□□ 0.45
LSM4-201ENST00000252816 CBX5P45973 191 aa17.84■□□□□ 0.45
LSM4-201ENST00000252816 RAB25P57735 213 aa17.84■□□□□ 0.45
LSM4-201ENST00000252816 CTF1Q16619 201 aa17.84■□□□□ 0.45
LSM4-201ENST00000252816 ACTBL2Q562R1 376 aa17.84■□□□□ 0.45
LSM4-201ENST00000252816 REC114Q7Z4M0 266 aa17.84■□□□□ 0.45
LSM4-201ENST00000252816 GRPEL2Q8TAA5 225 aa17.84■□□□□ 0.45
LSM4-201ENST00000252816 OR5B12Q96R08 314 aa17.84■□□□□ 0.45
LSM4-201ENST00000252816 COMMD3Q9UBI1 195 aa17.84■□□□□ 0.45
LSM4-201ENST00000252816 I3L521 148 aa17.83■□□□□ 0.44
LSM4-201ENST00000252816 FCGR3BO75015 233 aa17.83■□□□□ 0.44
LSM4-201ENST00000252816 GABARAPO95166 117 aa17.83■□□□□ 0.44
LSM4-201ENST00000252816 KRTAP10-11P60412 298 aa17.83■□□□□ 0.44
LSM4-201ENST00000252816 GNB1P62873 340 aa17.83■□□□□ 0.44
LSM4-201ENST00000252816 FHL3Q13643 280 aa17.83■□□□□ 0.44
LSM4-201ENST00000252816 OR2B11Q5JQS5 317 aa17.83■□□□□ 0.44
LSM4-201ENST00000252816 KCTD9Q7L273 389 aa17.83■□□□□ 0.44
LSM4-201ENST00000252816 CNIH1O95406 144 aa17.82■□□□□ 0.44
LSM4-201ENST00000252816 HOXD3P31249 432 aaPredicted RBP17.82■□□□□ 0.44
LSM4-201ENST00000252816 UBE2KP61086 200 aa17.82■□□□□ 0.44
LSM4-201ENST00000252816 RUNX1Q01196 453 aa17.82■□□□□ 0.44
LSM4-201ENST00000252816 OVCH2Q7RTZ1 564 aa17.82■□□□□ 0.44
LSM4-201ENST00000252816 OR11H1Q8NG94 326 aa17.82■□□□□ 0.44
LSM4-201ENST00000252816 OR5AP2Q8NGF4 316 aa17.82■□□□□ 0.44
LSM4-201ENST00000252816 OSR1Q8TAX0 266 aaPredicted RBP17.82■□□□□ 0.44
LSM4-201ENST00000252816 GPHA2Q96T91 129 aa17.82■□□□□ 0.44
LSM4-201ENST00000252816 MRPS26Q9BYN8 205 aaKnown RBP17.82■□□□□ 0.44
LSM4-201ENST00000252816 ANAPC10Q9UM13 185 aa17.82■□□□□ 0.44
LSM4-201ENST00000252816 PPYP01298 95 aa17.81■□□□□ 0.44
LSM4-201ENST00000252816 ALDH3B2P48448 385 aa17.81■□□□□ 0.44
LSM4-201ENST00000252816 BRWD1-AS2P59051 145 aa17.81■□□□□ 0.44
LSM4-201ENST00000252816 VMA21Q3ZAQ7 101 aa17.81■□□□□ 0.44
LSM4-201ENST00000252816 ASPHD1Q5U4P2 390 aa17.81■□□□□ 0.44
LSM4-201ENST00000252816 GPR107Q5VW38 600 aa17.81■□□□□ 0.44
LSM4-201ENST00000252816 IDO2Q6ZQW0 420 aa17.81■□□□□ 0.44
LSM4-201ENST00000252816 TEX45Q8NA69 505 aa17.81■□□□□ 0.44
LSM4-201ENST00000252816 OR5M8Q8NGP6 311 aa17.81■□□□□ 0.44
LSM4-201ENST00000252816 SECTM1Q8WVN6 248 aa17.81■□□□□ 0.44
LSM4-201ENST00000252816 HSD17B10Q99714 261 aaKnown RBP17.81■□□□□ 0.44
LSM4-201ENST00000252816 MCRIP2Q9BUT9 160 aaKnown RBP17.81■□□□□ 0.44
LSM4-201ENST00000252816 IFT46Q9NQC8 304 aa17.81■□□□□ 0.44
LSM4-201ENST00000252816 CCL28Q9NRJ3 127 aa17.81■□□□□ 0.44
LSM4-201ENST00000252816 TAS2R8Q9NYW2 309 aa17.81■□□□□ 0.44
LSM4-201ENST00000252816 APOA1P02647 267 aa17.8■□□□□ 0.44
LSM4-201ENST00000252816 EGFEM1PQ0D2K5 195 aa17.8■□□□□ 0.44
LSM4-201ENST00000252816 CDK10Q15131 360 aa17.8■□□□□ 0.44
LSM4-201ENST00000252816 OR1N2Q8NGR9 330 aa17.8■□□□□ 0.44
LSM4-201ENST00000252816 MS4A10Q96PG2 267 aa17.8■□□□□ 0.44
LSM4-201ENST00000252816 DCUN1D5Q9BTE7 237 aa17.8■□□□□ 0.44
LSM4-201ENST00000252816 ALX4Q9H161 411 aaPredicted RBP17.8■□□□□ 0.44
LSM4-201ENST00000252816 PRELID3BQ9Y3B1 194 aa17.8■□□□□ 0.44
LSM4-201ENST00000252816 TNCP24821 2201 aa17.8■□□□□ 0.44
LSM4-201ENST00000252816 SAA1P0DJI8 122 aaPredicted RBP17.79■□□□□ 0.44
LSM4-201ENST00000252816 RORCP51449 518 aa17.79■□□□□ 0.44
LSM4-201ENST00000252816 PRSS8Q16651 343 aa17.79■□□□□ 0.44
LSM4-201ENST00000252816 PYHIN1Q6K0P9 492 aa17.79■□□□□ 0.44
LSM4-201ENST00000252816 MFSD4AQ8N468 514 aa17.79■□□□□ 0.44
LSM4-201ENST00000252816 OR5T1Q8NG75 326 aa17.79■□□□□ 0.44
LSM4-201ENST00000252816 TCTEX1D2Q8WW35 142 aa17.79■□□□□ 0.44
LSM4-201ENST00000252816 GIMAP1Q8WWP7 306 aa17.79■□□□□ 0.44
LSM4-201ENST00000252816 ACOT12Q8WYK0 555 aa17.79■□□□□ 0.44
LSM4-201ENST00000252816 CMTM3Q96MX0 182 aa17.79■□□□□ 0.44
LSM4-201ENST00000252816 GPR61Q9BZJ8 451 aa17.79■□□□□ 0.44
LSM4-201ENST00000252816 TNFSF12O43508 249 aa17.78■□□□□ 0.44
LSM4-201ENST00000252816 HPGDSO60760 199 aa17.78■□□□□ 0.44
LSM4-201ENST00000252816 NAT1P18440 290 aa17.78■□□□□ 0.44
LSM4-201ENST00000252816 ELK1P19419 428 aa17.78■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 37.1 ms