RNA–Protein interactions for RNA: ENST00000251739.9

VPS50-201, Transcript of VPS50, EARP/GARPII complex subunit, humanhuman

TSL 1 (best) BASIC

Gene VPS50, Length 1,193 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50-201ENST00000251739 TRBV6-7A0A0A0MS04 114 aa7.85□□□□□ -1.15
VPS50-201ENST00000251739 A0A0G2JLM5 398 aa7.85□□□□□ -1.15
VPS50-201ENST00000251739 TRDCB7Z8K6 153 aa7.85□□□□□ -1.15
VPS50-201ENST00000251739 M0R1X1 148 aa7.85□□□□□ -1.15
VPS50-201ENST00000251739 SHOXO15266 292 aa7.85□□□□□ -1.15
VPS50-201ENST00000251739 RBMXL2O75526 392 aaKnown RBP7.85□□□□□ -1.15
VPS50-201ENST00000251739 CD40LGP29965 261 aa7.85□□□□□ -1.15
VPS50-201ENST00000251739 LGALS7P47929 136 aa7.85□□□□□ -1.15
VPS50-201ENST00000251739 SERPINB10P48595 397 aa7.85□□□□□ -1.15
VPS50-201ENST00000251739 RPS25P62851 125 aaKnown RBP7.85□□□□□ -1.15
VPS50-201ENST00000251739 PLA2G7Q13093 441 aa7.85□□□□□ -1.15
VPS50-201ENST00000251739 DYRK1AQ13627 763 aa7.85□□□□□ -1.15
VPS50-201ENST00000251739 MED22Q15528 200 aa7.85□□□□□ -1.15
VPS50-201ENST00000251739 RAB11BQ15907 218 aa7.85□□□□□ -1.15
VPS50-201ENST00000251739 TMEM177Q53S58 311 aa7.85□□□□□ -1.15
VPS50-201ENST00000251739 ZNF343Q6P1L6 599 aa7.85□□□□□ -1.15
VPS50-201ENST00000251739 OR4A4PQ8NGN8 299 aa7.85□□□□□ -1.15
VPS50-201ENST00000251739 OR9G4Q8NGQ1 327 aa7.85□□□□□ -1.15
VPS50-201ENST00000251739 UFD1Q92890 307 aa7.85□□□□□ -1.15
VPS50-201ENST00000251739 TMEM68Q96MH6 324 aa7.85□□□□□ -1.15
VPS50-201ENST00000251739 CMSS1Q9BQ75 279 aaKnown RBP7.85□□□□□ -1.15
VPS50-201ENST00000251739 TINAGL1Q9GZM7 467 aaPredicted RBP7.85□□□□□ -1.15
VPS50-201ENST00000251739 DUSP21Q9H596 190 aa7.85□□□□□ -1.15
VPS50-201ENST00000251739 PLGRKTQ9HBL7 147 aa7.85□□□□□ -1.15
VPS50-201ENST00000251739 SLC35D1Q9NTN3 355 aa7.85□□□□□ -1.15
VPS50-201ENST00000251739 GAR1Q9NY12 217 aaKnown RBP7.85□□□□□ -1.15
VPS50-201ENST00000251739 SIGLEC8Q9NYZ4 499 aa7.85□□□□□ -1.15
VPS50-201ENST00000251739 C13orf42A0A1B0GVH6 325 aa7.84□□□□□ -1.15
VPS50-201ENST00000251739 SRRM4A7MD48 611 aaKnown RBP7.84□□□□□ -1.15
VPS50-201ENST00000251739 PTGES3LE9PB15 166 aa7.84□□□□□ -1.15
VPS50-201ENST00000251739 FABP7O15540 132 aa7.84□□□□□ -1.15
VPS50-201ENST00000251739 TRBV12-3P01733 135 aa7.84□□□□□ -1.15
VPS50-201ENST00000251739 MECP2P51608 486 aaKnown RBP7.84□□□□□ -1.15
VPS50-201ENST00000251739 PSMD7P51665 324 aa7.84□□□□□ -1.15
VPS50-201ENST00000251739 CLDN12P56749 244 aa7.84□□□□□ -1.15
VPS50-201ENST00000251739 DEFA5Q01523 94 aa7.84□□□□□ -1.15
VPS50-201ENST00000251739 IGSF11Q5DX21 431 aa7.84□□□□□ -1.15
VPS50-201ENST00000251739 ANKRD13BQ86YJ7 626 aa7.84□□□□□ -1.15
VPS50-201ENST00000251739 SGPP2Q8IWX5 399 aa7.84□□□□□ -1.15
VPS50-201ENST00000251739 OR5T1Q8NG75 326 aa7.84□□□□□ -1.15
VPS50-201ENST00000251739 OR56B1Q8NGI3 324 aa7.84□□□□□ -1.15
VPS50-201ENST00000251739 DDB2Q92466 427 aa7.84□□□□□ -1.15
VPS50-201ENST00000251739 TMEM203Q969S6 136 aa7.84□□□□□ -1.15
VPS50-201ENST00000251739 FAM3DQ96BQ1 224 aa7.84□□□□□ -1.15
VPS50-201ENST00000251739 ISOC1Q96CN7 298 aa7.84□□□□□ -1.15
VPS50-201ENST00000251739 HARBI1Q96MB7 349 aa7.84□□□□□ -1.15
VPS50-201ENST00000251739 OR2D2Q9H210 308 aa7.84□□□□□ -1.15
VPS50-201ENST00000251739 SDHAF2Q9NX18 166 aa7.84□□□□□ -1.15
VPS50-201ENST00000251739 AK6Q9Y3D8 172 aaKnown RBP7.84□□□□□ -1.15
VPS50-201ENST00000251739 TMEM272A0A1B0GTI8 110 aa7.83□□□□□ -1.16
VPS50-201ENST00000251739 ANKRD34BA5PLL1 514 aa7.83□□□□□ -1.16
VPS50-201ENST00000251739 MFNGO00587 321 aa7.83□□□□□ -1.16
VPS50-201ENST00000251739 ARL6IP5O75915 188 aa7.83□□□□□ -1.16
VPS50-201ENST00000251739 CSN3P07498 182 aa7.83□□□□□ -1.16
VPS50-201ENST00000251739 FCGR3AP08637 254 aa7.83□□□□□ -1.16
VPS50-201ENST00000251739 CD3GP09693 182 aa7.83□□□□□ -1.16
VPS50-201ENST00000251739 AADACP22760 399 aa7.83□□□□□ -1.16
VPS50-201ENST00000251739 PSMA1P25786 263 aaKnown RBP7.83□□□□□ -1.16
VPS50-201ENST00000251739 SYNJ2BPP57105 145 aa7.83□□□□□ -1.16
VPS50-201ENST00000251739 MLLT11Q13015 90 aaPredicted RBP7.83□□□□□ -1.16
VPS50-201ENST00000251739 TRAM1Q15629 374 aa7.83□□□□□ -1.16
VPS50-201ENST00000251739 HAGHQ16775 308 aa7.83□□□□□ -1.16
VPS50-201ENST00000251739 C2orf76Q3KRA6 126 aa7.83□□□□□ -1.16
VPS50-201ENST00000251739 ADAD2Q8NCV1 583 aaKnown RBP7.83□□□□□ -1.16
VPS50-201ENST00000251739 USMG5Q96IX5 58 aa7.83□□□□□ -1.16
VPS50-201ENST00000251739 SPATA25Q9BR10 227 aa7.83□□□□□ -1.16
VPS50-201ENST00000251739 PALMDQ9NP74 551 aa7.83□□□□□ -1.16
VPS50-201ENST00000251739 IZUMO1RA6ND01 250 aa7.82□□□□□ -1.16
VPS50-201ENST00000251739 H0Y980 276 aa7.82□□□□□ -1.16
VPS50-201ENST00000251739 RAB27BO00194 218 aa7.82□□□□□ -1.16
VPS50-201ENST00000251739 BET1O15155 118 aa7.82□□□□□ -1.16
VPS50-201ENST00000251739 DENRO43583 198 aaKnown RBP7.82□□□□□ -1.16
VPS50-201ENST00000251739 OR2A4O95047 310 aa7.82□□□□□ -1.16
VPS50-201ENST00000251739 CNIH1O95406 144 aa7.82□□□□□ -1.16
VPS50-201ENST00000251739 GSTT2P0CG29 244 aa7.82□□□□□ -1.16
VPS50-201ENST00000251739 GSTT2BP0CG30 244 aa7.82□□□□□ -1.16
VPS50-201ENST00000251739 UBE2KP61086 200 aa7.82□□□□□ -1.16
VPS50-201ENST00000251739 FABP5Q01469 135 aa7.82□□□□□ -1.16
VPS50-201ENST00000251739 PRSS8Q16651 343 aa7.82□□□□□ -1.16
VPS50-201ENST00000251739 ZFAND6Q6FIF0 208 aa7.82□□□□□ -1.16
VPS50-201ENST00000251739 ADAMTSL5Q6ZMM2 481 aa7.82□□□□□ -1.16
VPS50-201ENST00000251739 LINC00322Q6ZN03 302 aaPredicted RBP7.82□□□□□ -1.16
VPS50-201ENST00000251739 Q6ZS49 121 aa7.82□□□□□ -1.16
VPS50-201ENST00000251739 BVESQ8NE79 360 aa7.82□□□□□ -1.16
VPS50-201ENST00000251739 VCXQ9H320 206 aa7.82□□□□□ -1.16
VPS50-201ENST00000251739 ZNF355PQ9NSJ1 428 aa7.82□□□□□ -1.16
VPS50-201ENST00000251739 SCN3BQ9NY72 215 aa7.82□□□□□ -1.16
VPS50-201ENST00000251739 PEF1Q9UBV8 284 aaKnown RBP7.82□□□□□ -1.16
VPS50-201ENST00000251739 V9GY05 133 aa7.82□□□□□ -1.16
VPS50-201ENST00000251739 IGKV1D-8A0A087WSZ0 117 aa7.81□□□□□ -1.16
VPS50-201ENST00000251739 TRBV9A0A0B4J1U6 114 aa7.81□□□□□ -1.16
VPS50-201ENST00000251739 LINC00473A8K010 186 aa7.81□□□□□ -1.16
VPS50-201ENST00000251739 BMPR1BO00238 502 aa7.81□□□□□ -1.16
VPS50-201ENST00000251739 RGS10O43665 173 aa7.81□□□□□ -1.16
VPS50-201ENST00000251739 RRASP10301 218 aa7.81□□□□□ -1.16
VPS50-201ENST00000251739 DUTP33316 252 aaKnown RBP7.81□□□□□ -1.16
VPS50-201ENST00000251739 AQP4P55087 323 aa7.81□□□□□ -1.16
VPS50-201ENST00000251739 ZNF45Q02386 682 aa7.81□□□□□ -1.16
VPS50-201ENST00000251739 RTL8BQ17RB0 113 aa7.81□□□□□ -1.16
VPS50-201ENST00000251739 LCN12Q6JVE5 192 aa7.81□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 35.1 ms